RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 TMPRSS11AQ6ZMR5 421 aa3.28□□□□□ -1.88
PRKDC-208ENST00000536710 NDUFAF7Q7L592 441 aa3.28□□□□□ -1.88
PRKDC-208ENST00000536710 ZNF645Q8N7E2 425 aa3.28□□□□□ -1.88
PRKDC-208ENST00000536710 ZNF75CPQ92670 426 aaPredicted RBP3.28□□□□□ -1.88
PRKDC-208ENST00000536710 TFGQ92734 400 aaPredicted RBP3.28□□□□□ -1.88
PRKDC-208ENST00000536710 GHSRQ92847 366 aa3.28□□□□□ -1.88
PRKDC-208ENST00000536710 CDS1Q92903 461 aa3.28□□□□□ -1.88
PRKDC-208ENST00000536710 TOP1MTQ969P6 601 aa3.28□□□□□ -1.88
PRKDC-208ENST00000536710 FAM131CQ96AQ9 280 aa3.28□□□□□ -1.88
PRKDC-208ENST00000536710 CDX2Q99626 313 aaPredicted RBP3.28□□□□□ -1.88
PRKDC-208ENST00000536710 TBL1YQ9BQ87 522 aa3.28□□□□□ -1.88
PRKDC-208ENST00000536710 SAMD10Q9BYL1 202 aa3.28□□□□□ -1.88
PRKDC-208ENST00000536710 TOLLIPQ9H0E2 274 aa3.28□□□□□ -1.88
PRKDC-208ENST00000536710 C1orf198Q9H425 327 aa3.28□□□□□ -1.88
PRKDC-208ENST00000536710 SIRT7Q9NRC8 400 aa3.28□□□□□ -1.88
PRKDC-208ENST00000536710 CYTL1Q9NRR1 136 aa3.28□□□□□ -1.88
PRKDC-208ENST00000536710 ENOPH1Q9UHY7 261 aa3.28□□□□□ -1.88
PRKDC-208ENST00000536710 CES1P1Q9UKY3 287 aa3.28□□□□□ -1.88
PRKDC-208ENST00000536710 BZW2Q9Y6E2 419 aaKnown RBP3.28□□□□□ -1.88
PRKDC-208ENST00000536710 A0A0J9YYE9 177 aa3.27□□□□□ -1.89
PRKDC-208ENST00000536710 A0A1W2PNU3 283 aaPredicted RBP3.27□□□□□ -1.89
PRKDC-208ENST00000536710 RSPH10B2B2RC85 870 aa3.27□□□□□ -1.89
PRKDC-208ENST00000536710 SOCS1O15524 211 aa3.27□□□□□ -1.89
PRKDC-208ENST00000536710 ZNF207O43670 478 aaKnown RBP3.27□□□□□ -1.89
PRKDC-208ENST00000536710 CTNSO60931 367 aa3.27□□□□□ -1.89
PRKDC-208ENST00000536710 GLSO94925 669 aaPredicted RBP3.27□□□□□ -1.89
PRKDC-208ENST00000536710 PTTG1O95997 202 aa3.27□□□□□ -1.89
PRKDC-208ENST00000536710 GCGP01275 180 aa3.27□□□□□ -1.89
PRKDC-208ENST00000536710 TRBC1P01850 177 aa3.27□□□□□ -1.89
PRKDC-208ENST00000536710 DCNP07585 359 aaKnown RBP3.27□□□□□ -1.89
PRKDC-208ENST00000536710 LINC00869P0C866 280 aa3.27□□□□□ -1.89
PRKDC-208ENST00000536710 RSPH10BP0C881 870 aa3.27□□□□□ -1.89
PRKDC-208ENST00000536710 POLR2IP36954 125 aaKnown RBP3.27□□□□□ -1.89
PRKDC-208ENST00000536710 CSKP41240 450 aa3.27□□□□□ -1.89
PRKDC-208ENST00000536710 CXCL12P48061 93 aa3.27□□□□□ -1.89
PRKDC-208ENST00000536710 LINC00315P59091 139 aa3.27□□□□□ -1.89
PRKDC-208ENST00000536710 PNOCQ13519 176 aa3.27□□□□□ -1.89
PRKDC-208ENST00000536710 EIF4EBP1Q13541 118 aaPredicted RBP3.27□□□□□ -1.89
PRKDC-208ENST00000536710 Q5W150 140 aa3.27□□□□□ -1.89
PRKDC-208ENST00000536710 THOC7Q6I9Y2 204 aaKnown RBP3.27□□□□□ -1.89
PRKDC-208ENST00000536710 OPN5Q6U736 354 aa3.27□□□□□ -1.89
PRKDC-208ENST00000536710 TTLQ8NG68 377 aa3.27□□□□□ -1.89
PRKDC-208ENST00000536710 ZNF461Q8TAF7 563 aa3.27□□□□□ -1.89
PRKDC-208ENST00000536710 LINC01560Q8TB33 94 aa3.27□□□□□ -1.89
PRKDC-208ENST00000536710 MITD1Q8WV92 249 aa3.27□□□□□ -1.89
PRKDC-208ENST00000536710 OR8D1Q8WZ84 308 aa3.27□□□□□ -1.89
PRKDC-208ENST00000536710 TMEM159Q96B96 161 aa3.27□□□□□ -1.89
PRKDC-208ENST00000536710 RNF157Q96PX1 679 aa3.27□□□□□ -1.89
PRKDC-208ENST00000536710 TEAD3Q99594 435 aa3.27□□□□□ -1.89
PRKDC-208ENST00000536710 KCNS3Q9BQ31 491 aa3.27□□□□□ -1.89
PRKDC-208ENST00000536710 KIR3DX1Q9H7L2 352 aa3.27□□□□□ -1.89
PRKDC-208ENST00000536710 FBXO6Q9NRD1 293 aaPredicted RBP3.27□□□□□ -1.89
PRKDC-208ENST00000536710 C8orf17Q9NRJ1 99 aa3.27□□□□□ -1.89
PRKDC-208ENST00000536710 NECAP2Q9NVZ3 263 aa3.27□□□□□ -1.89
PRKDC-208ENST00000536710 NACAE9PAV3 2078 aa3.26□□□□□ -1.89
PRKDC-208ENST00000536710 MROH5Q6ZUA9 1318 aa3.26□□□□□ -1.89
PRKDC-208ENST00000536710 C7orf66A4D0T2 115 aa3.26□□□□□ -1.89
PRKDC-208ENST00000536710 OR5H1A6NKK0 313 aa3.26□□□□□ -1.89
PRKDC-208ENST00000536710 DFFAO00273 331 aa3.26□□□□□ -1.89
PRKDC-208ENST00000536710 PAHP00439 452 aa3.26□□□□□ -1.89
PRKDC-208ENST00000536710 HLA-DQB1P01920 261 aa3.26□□□□□ -1.89
PRKDC-208ENST00000536710 THRAP10827 490 aa3.26□□□□□ -1.89
PRKDC-208ENST00000536710 ME2P23368 584 aa3.26□□□□□ -1.89
PRKDC-208ENST00000536710 UBE2E1P51965 193 aa3.26□□□□□ -1.89
PRKDC-208ENST00000536710 PITPNAQ00169 270 aa3.26□□□□□ -1.89
PRKDC-208ENST00000536710 KDSRQ06136 332 aa3.26□□□□□ -1.89
PRKDC-208ENST00000536710 SIGLEC14Q08ET2 396 aa3.26□□□□□ -1.89
PRKDC-208ENST00000536710 NAB1Q13506 487 aa3.26□□□□□ -1.89
PRKDC-208ENST00000536710 OR1Q1Q15612 314 aa3.26□□□□□ -1.89
PRKDC-208ENST00000536710 C5orf47Q569G3 176 aa3.26□□□□□ -1.89
PRKDC-208ENST00000536710 C6orf183Q5T699 404 aa3.26□□□□□ -1.89
PRKDC-208ENST00000536710 ASCC1Q8N9N2 400 aaKnown RBP3.26□□□□□ -1.89
PRKDC-208ENST00000536710 OR6K6Q8NGW6 343 aa3.26□□□□□ -1.89
PRKDC-208ENST00000536710 RXFP2Q8WXD0 754 aa3.26□□□□□ -1.89
PRKDC-208ENST00000536710 ING5Q8WYH8 240 aa3.26□□□□□ -1.89
PRKDC-208ENST00000536710 OR10C1Q96KK4 312 aa3.26□□□□□ -1.89
PRKDC-208ENST00000536710 UBE2E2Q96LR5 201 aa3.26□□□□□ -1.89
PRKDC-208ENST00000536710 OSBPL11Q9BXB4 747 aa3.26□□□□□ -1.89
PRKDC-208ENST00000536710 RHBDL2Q9NX52 303 aa3.26□□□□□ -1.89
PRKDC-208ENST00000536710 OR51B2Q9Y5P1 312 aa3.26□□□□□ -1.89
PRKDC-208ENST00000536710 RFNGQ9Y644 331 aa3.26□□□□□ -1.89
PRKDC-208ENST00000536710 IGKV1-27A0A075B6S5 117 aa3.25□□□□□ -1.89
PRKDC-208ENST00000536710 TAAR5O14804 337 aa3.25□□□□□ -1.89
PRKDC-208ENST00000536710 CCNKO75909 580 aa3.25□□□□□ -1.89
PRKDC-208ENST00000536710 PLEKHA8P1O95397 391 aa3.25□□□□□ -1.89
PRKDC-208ENST00000536710 IGHV3-11P01762 117 aa3.25□□□□□ -1.89
PRKDC-208ENST00000536710 HSPD1P10809 573 aaKnown RBP3.25□□□□□ -1.89
PRKDC-208ENST00000536710 MUC1P15941 1255 aaPredicted RBP3.25□□□□□ -1.89
PRKDC-208ENST00000536710 IL1RNP18510 177 aa3.25□□□□□ -1.89
PRKDC-208ENST00000536710 IVDP26440 423 aa3.25□□□□□ -1.89
PRKDC-208ENST00000536710 LOXP28300 417 aaPredicted RBP3.25□□□□□ -1.89
PRKDC-208ENST00000536710 APLNRP35414 380 aa3.25□□□□□ -1.89
PRKDC-208ENST00000536710 PCK1P35558 622 aa3.25□□□□□ -1.89
PRKDC-208ENST00000536710 PSMC5P62195 406 aa3.25□□□□□ -1.89
PRKDC-208ENST00000536710 ATP6V1FQ16864 119 aa3.25□□□□□ -1.89
PRKDC-208ENST00000536710 SLC25A25Q6KCM7 469 aa3.25□□□□□ -1.89
PRKDC-208ENST00000536710 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
PRKDC-208ENST00000536710 CD300LGQ6UXG3 332 aa3.25□□□□□ -1.89
PRKDC-208ENST00000536710 Q6ZSR6 202 aa3.25□□□□□ -1.89
PRKDC-208ENST00000536710 OR13C9Q8NGT0 318 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms