RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 COLQQ9Y215 455 aaPredicted RBP12.47□□□□□ -0.41
LIG1-203ENST00000536218 A0A1B0GTH9 108 aa12.46□□□□□ -0.41
LIG1-203ENST00000536218 SERINC4A6NH21 518 aa12.46□□□□□ -0.41
LIG1-203ENST00000536218 ZNF727A8MUV8 499 aa12.46□□□□□ -0.41
LIG1-203ENST00000536218 ZNF705GA8MUZ8 300 aaPredicted RBP12.46□□□□□ -0.41
LIG1-203ENST00000536218 GPRIN2O60269 458 aa12.46□□□□□ -0.41
LIG1-203ENST00000536218 NME2P1O60361 137 aa12.46□□□□□ -0.41
LIG1-203ENST00000536218 CRABP1P29762 137 aa12.46□□□□□ -0.41
LIG1-203ENST00000536218 RPL4P36578 427 aaKnown RBP12.46□□□□□ -0.41
LIG1-203ENST00000536218 HSD11B2P80365 405 aa12.46□□□□□ -0.41
LIG1-203ENST00000536218 ZP2Q05996 745 aa12.46□□□□□ -0.41
LIG1-203ENST00000536218 FUT7Q11130 342 aa12.46□□□□□ -0.41
LIG1-203ENST00000536218 PPA1Q15181 289 aa12.46□□□□□ -0.41
LIG1-203ENST00000536218 ANKRD16Q6P6B7 361 aa12.46□□□□□ -0.41
LIG1-203ENST00000536218 CBLN3Q6UW01 205 aa12.46□□□□□ -0.41
LIG1-203ENST00000536218 TMPRSS11FQ6ZWK6 438 aa12.46□□□□□ -0.41
LIG1-203ENST00000536218 C17orf82Q86X59 251 aaPredicted RBP12.46□□□□□ -0.41
LIG1-203ENST00000536218 OR10AD1Q8NGE0 317 aa12.46□□□□□ -0.41
LIG1-203ENST00000536218 BSCL2Q96G97 398 aaPredicted RBP12.46□□□□□ -0.41
LIG1-203ENST00000536218 Q96M85 177 aa12.46□□□□□ -0.41
LIG1-203ENST00000536218 SLC6A7Q99884 636 aa12.46□□□□□ -0.41
LIG1-203ENST00000536218 DUSP15Q9H1R2 295 aaPredicted RBP12.46□□□□□ -0.41
LIG1-203ENST00000536218 TMED7Q9Y3B3 224 aa12.46□□□□□ -0.41
LIG1-203ENST00000536218 CFAP54Q96N23 3096 aa12.46□□□□□ -0.41
LIG1-203ENST00000536218 OR2T7P0C7T2 308 aa12.46□□□□□ -0.41
LIG1-203ENST00000536218 DHPSP49366 369 aaPredicted RBP12.46□□□□□ -0.41
LIG1-203ENST00000536218 NSDHLQ15738 373 aa12.46□□□□□ -0.41
LIG1-203ENST00000536218 C4orf17Q53FE4 359 aa12.46□□□□□ -0.41
LIG1-203ENST00000536218 ANGPTL5Q86XS5 388 aa12.46□□□□□ -0.41
LIG1-203ENST00000536218 OR2T27Q8NH04 317 aa12.46□□□□□ -0.41
LIG1-203ENST00000536218 MRI1Q9BV20 369 aa12.46□□□□□ -0.41
LIG1-203ENST00000536218 RNF126Q9BV68 326 aa12.46□□□□□ -0.41
LIG1-203ENST00000536218 ZDBF2Q9HCK1 2354 aa12.46□□□□□ -0.41
LIG1-203ENST00000536218 WDFY4Q6ZS81 3184 aa12.46□□□□□ -0.42
LIG1-203ENST00000536218 FAM157AC9JC47 383 aa12.46□□□□□ -0.42
LIG1-203ENST00000536218 H0YIZ8 118 aa12.46□□□□□ -0.42
LIG1-203ENST00000536218 IGLV3-21P80748 117 aaPredicted RBP12.46□□□□□ -0.42
LIG1-203ENST00000536218 CD226Q15762 336 aa12.46□□□□□ -0.42
LIG1-203ENST00000536218 EIF5AL1Q6IS14 154 aaKnown RBP12.46□□□□□ -0.42
LIG1-203ENST00000536218 ZNF343Q6P1L6 599 aa12.46□□□□□ -0.42
LIG1-203ENST00000536218 ULK3Q6PHR2 472 aa12.46□□□□□ -0.42
LIG1-203ENST00000536218 HEPN1Q6WQI6 88 aa12.46□□□□□ -0.42
LIG1-203ENST00000536218 ZNF550Q7Z398 422 aa12.46□□□□□ -0.42
LIG1-203ENST00000536218 BIVMQ86UB2 503 aa12.46□□□□□ -0.42
LIG1-203ENST00000536218 SYS1Q8N2H4 156 aa12.46□□□□□ -0.42
LIG1-203ENST00000536218 OR6X1Q8NH79 312 aa12.46□□□□□ -0.42
LIG1-203ENST00000536218 CDX2Q99626 313 aaPredicted RBP12.46□□□□□ -0.42
LIG1-203ENST00000536218 KLHDC3Q9BQ90 382 aa12.46□□□□□ -0.42
LIG1-203ENST00000536218 LANCL2Q9NS86 450 aa12.46□□□□□ -0.42
LIG1-203ENST00000536218 FBXO7Q9Y3I1 522 aa12.46□□□□□ -0.42
LIG1-203ENST00000536218 SMCO3A2RU48 225 aa12.45□□□□□ -0.42
LIG1-203ENST00000536218 H0YIG0 161 aa12.45□□□□□ -0.42
LIG1-203ENST00000536218 DUX1O43812 170 aa12.45□□□□□ -0.42
LIG1-203ENST00000536218 SLC2A5P22732 501 aa12.45□□□□□ -0.42
LIG1-203ENST00000536218 RPS23P62266 143 aaKnown RBP12.45□□□□□ -0.42
LIG1-203ENST00000536218 BTNL8Q6UX41 500 aa12.45□□□□□ -0.42
LIG1-203ENST00000536218 PLXDC1Q8IUK5 500 aa12.45□□□□□ -0.42
LIG1-203ENST00000536218 PRSS35Q8N3Z0 413 aa12.45□□□□□ -0.42
LIG1-203ENST00000536218 OR13C8Q8NGS7 320 aa12.45□□□□□ -0.42
LIG1-203ENST00000536218 OR10J5Q8NHC4 309 aa12.45□□□□□ -0.42
LIG1-203ENST00000536218 PACRGQ96M98 296 aaPredicted RBP12.45□□□□□ -0.42
LIG1-203ENST00000536218 ULBP3Q9BZM4 244 aa12.45□□□□□ -0.42
LIG1-203ENST00000536218 PRO3102Q9H379 93 aa12.45□□□□□ -0.42
LIG1-203ENST00000536218 KCNJ16Q9NPI9 418 aa12.45□□□□□ -0.42
LIG1-203ENST00000536218 PRODH2Q9UF12 536 aa12.45□□□□□ -0.42
LIG1-203ENST00000536218 GOLT1BQ9Y3E0 138 aa12.45□□□□□ -0.42
LIG1-203ENST00000536218 IER3IP1Q9Y5U9 82 aa12.45□□□□□ -0.42
LIG1-203ENST00000536218 PI4KAP42356 2102 aa12.45□□□□□ -0.42
LIG1-203ENST00000536218 A0A087WZY1 265 aa12.45□□□□□ -0.42
LIG1-203ENST00000536218 ADAM10O14672 748 aa12.45□□□□□ -0.42
LIG1-203ENST00000536218 OR8G3PP0DMU2 310 aa12.45□□□□□ -0.42
LIG1-203ENST00000536218 FOSL2P15408 326 aa12.45□□□□□ -0.42
LIG1-203ENST00000536218 RAB4AP20338 218 aa12.45□□□□□ -0.42
LIG1-203ENST00000536218 IL2RGP31785 369 aa12.45□□□□□ -0.42
LIG1-203ENST00000536218 S100A10P60903 97 aa12.45□□□□□ -0.42
LIG1-203ENST00000536218 ZNF141Q15928 474 aa12.45□□□□□ -0.42
LIG1-203ENST00000536218 OR2T2Q6IF00 324 aa12.45□□□□□ -0.42
LIG1-203ENST00000536218 DNM1P46Q6ZS02 220 aa12.45□□□□□ -0.42
LIG1-203ENST00000536218 HIST3H2BBQ8N257 126 aa12.45□□□□□ -0.42
LIG1-203ENST00000536218 PHYHIPQ92561 330 aa12.45□□□□□ -0.42
LIG1-203ENST00000536218 HOXB13Q92826 284 aaPredicted RBP12.45□□□□□ -0.42
LIG1-203ENST00000536218 SMIM3Q9BZL3 60 aa12.45□□□□□ -0.42
LIG1-203ENST00000536218 MKKSQ9NPJ1 570 aaPredicted RBP12.45□□□□□ -0.42
LIG1-203ENST00000536218 PRR13Q9NZ81 148 aa12.45□□□□□ -0.42
LIG1-203ENST00000536218 OR5AC2Q9NZP5 309 aa12.45□□□□□ -0.42
LIG1-203ENST00000536218 SIT1Q9Y3P8 196 aa12.45□□□□□ -0.42
LIG1-203ENST00000536218 DMDP11532 3685 aa12.45□□□□□ -0.42
LIG1-203ENST00000536218 MED19A0JLT2 244 aaPredicted RBP12.44□□□□□ -0.42
LIG1-203ENST00000536218 HIST1H2BKO60814 126 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 GLCEO94923 617 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 HIST1H2BJP06899 126 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 ERCC1P07992 297 aaPredicted RBP12.44□□□□□ -0.42
LIG1-203ENST00000536218 HIST1H2BOP23527 126 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 ZBTB25P24278 435 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 HIST1H2BBP33778 126 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 EFNA3P52797 238 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 HIST1H2BDP58876 126 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 HIST1H2BCP62807 126 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 SRSF4Q08170 494 aaKnown RBP12.44□□□□□ -0.42
LIG1-203ENST00000536218 GUK1Q16774 197 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms