RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 PRSS35Q8N3Z0 413 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 WFDC11Q8NEX6 87 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 OR2Z1Q8NG97 314 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 OR56B2PQ8NGI1 322 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 OR51E1Q8TCB6 317 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 PELI1Q96FA3 418 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 MRPL48Q96GC5 212 aaKnown RBP10.26□□□□□ -0.77
CHD4-203ENST00000535717 TMEM80Q96HE8 168 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 C4orf36Q96KX1 117 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 CNBD2Q96M20 576 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 SLC30A2Q9BRI3 323 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 SOX7Q9BT81 388 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 FKBP14Q9NWM8 211 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 NKIRAS2Q9NYR9 191 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 PTTG2Q9NZH5 202 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 CNOT2Q9NZN8 540 aaKnown RBP10.26□□□□□ -0.77
CHD4-203ENST00000535717 ZDHHC8Q9ULC8 765 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 SLC22A13Q9Y226 551 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 CHD3Q12873 2000 aaKnown RBP10.25□□□□□ -0.77
CHD4-203ENST00000535717 A0A1B0GTI1 187 aa10.25□□□□□ -0.77
CHD4-203ENST00000535717 H0YL77 283 aa10.25□□□□□ -0.77
CHD4-203ENST00000535717 MLNRO43193 412 aa10.25□□□□□ -0.77
CHD4-203ENST00000535717 DAOP14920 347 aa10.25□□□□□ -0.77
CHD4-203ENST00000535717 DDOSTP39656 456 aa10.25□□□□□ -0.77
CHD4-203ENST00000535717 NANOS3P60323 173 aaKnown RBP10.25□□□□□ -0.77
CHD4-203ENST00000535717 CSNK2BP67870 215 aa10.25□□□□□ -0.77
CHD4-203ENST00000535717 OR8B8Q15620 311 aa10.25□□□□□ -0.77
CHD4-203ENST00000535717 CLEC12BQ2HXU8 276 aa10.25□□□□□ -0.77
CHD4-203ENST00000535717 SPRNQ5BIV9 151 aa10.25□□□□□ -0.77
CHD4-203ENST00000535717 WDR38Q5JTN6 314 aa10.25□□□□□ -0.77
CHD4-203ENST00000535717 FAM209AQ5JX71 171 aa10.25□□□□□ -0.77
CHD4-203ENST00000535717 FDX2Q6P4F2 183 aa10.25□□□□□ -0.77
CHD4-203ENST00000535717 DNM1P46Q6ZS02 220 aa10.25□□□□□ -0.77
CHD4-203ENST00000535717 AHSA2Q719I0 299 aa10.25□□□□□ -0.77
CHD4-203ENST00000535717 SYS1Q8N2H4 156 aa10.25□□□□□ -0.77
CHD4-203ENST00000535717 ZNF525Q8N782 197 aa10.25□□□□□ -0.77
CHD4-203ENST00000535717 ZNF540Q8NDQ6 660 aa10.25□□□□□ -0.77
CHD4-203ENST00000535717 OR10AD1Q8NGE0 317 aa10.25□□□□□ -0.77
CHD4-203ENST00000535717 OR13G1Q8NGZ3 307 aa10.25□□□□□ -0.77
CHD4-203ENST00000535717 OR2G2Q8NGZ5 317 aa10.25□□□□□ -0.77
CHD4-203ENST00000535717 ELMOD3Q96FG2 381 aa10.25□□□□□ -0.77
CHD4-203ENST00000535717 DIRC2Q96SL1 478 aa10.25□□□□□ -0.77
CHD4-203ENST00000535717 GPR84Q9NQS5 396 aa10.25□□□□□ -0.77
CHD4-203ENST00000535717 TMEM100Q9NV29 134 aa10.25□□□□□ -0.77
CHD4-203ENST00000535717 CLEC2DQ9UHP7 191 aa10.25□□□□□ -0.77
CHD4-203ENST00000535717 ZNF391Q9UJN7 358 aa10.25□□□□□ -0.77
CHD4-203ENST00000535717 EXOSC1Q9Y3B2 195 aaKnown RBP10.25□□□□□ -0.77
CHD4-203ENST00000535717 ZANQ9Y493 2812 aa10.24□□□□□ -0.77
CHD4-203ENST00000535717 PTGES3LE9PB15 166 aa10.24□□□□□ -0.77
CHD4-203ENST00000535717 E9PI62 339 aa10.24□□□□□ -0.77
CHD4-203ENST00000535717 LYNX1G3V0Z9 82 aa10.24□□□□□ -0.77
CHD4-203ENST00000535717 P2RY10O00398 339 aa10.24□□□□□ -0.77
CHD4-203ENST00000535717 DENRO43583 198 aaKnown RBP10.24□□□□□ -0.77
CHD4-203ENST00000535717 HLA-DPB1P04440 258 aa10.24□□□□□ -0.77
CHD4-203ENST00000535717 CD55P08174 381 aa10.24□□□□□ -0.77
CHD4-203ENST00000535717 LYNX1P0DP58 116 aa10.24□□□□□ -0.77
CHD4-203ENST00000535717 MYL12AP19105 171 aa10.24□□□□□ -0.77
CHD4-203ENST00000535717 CA6P23280 308 aa10.24□□□□□ -0.77
CHD4-203ENST00000535717 ACKR3P25106 362 aa10.24□□□□□ -0.77
CHD4-203ENST00000535717 C21orf33P30042 268 aaPredicted RBP10.24□□□□□ -0.77
CHD4-203ENST00000535717 KIR3DL2P43630 455 aa10.24□□□□□ -0.77
CHD4-203ENST00000535717 TNFAIP6P98066 277 aaPredicted RBP10.24□□□□□ -0.77
CHD4-203ENST00000535717 ODF4Q2M2E3 257 aa10.24□□□□□ -0.77
CHD4-203ENST00000535717 OR2G6Q5TZ20 316 aa10.24□□□□□ -0.77
CHD4-203ENST00000535717 COMMD2Q86X83 199 aa10.24□□□□□ -0.77
CHD4-203ENST00000535717 STX19Q8N4C7 294 aa10.24□□□□□ -0.77
CHD4-203ENST00000535717 PLPP7Q8NBV4 271 aa10.24□□□□□ -0.77
CHD4-203ENST00000535717 UBASH3BQ8TF42 649 aa10.24□□□□□ -0.77
CHD4-203ENST00000535717 SGCDQ92629 289 aa10.24□□□□□ -0.77
CHD4-203ENST00000535717 FAM71F1Q96KD3 344 aaPredicted RBP10.24□□□□□ -0.77
CHD4-203ENST00000535717 Q96MF0 132 aa10.24□□□□□ -0.77
CHD4-203ENST00000535717 Q9H521 79 aa10.24□□□□□ -0.77
CHD4-203ENST00000535717 DECR2Q9NUI1 292 aa10.24□□□□□ -0.77
CHD4-203ENST00000535717 PAK1IP1Q9NWT1 392 aaPredicted RBP10.24□□□□□ -0.77
CHD4-203ENST00000535717 SCN3BQ9NY72 215 aa10.24□□□□□ -0.77
CHD4-203ENST00000535717 MRPL15Q9P015 296 aaKnown RBP10.24□□□□□ -0.77
CHD4-203ENST00000535717 FRRS1LQ9P0K9 344 aa10.24□□□□□ -0.77
CHD4-203ENST00000535717 CAB39Q9Y376 341 aaPredicted RBP10.24□□□□□ -0.77
CHD4-203ENST00000535717 RHBDD3Q9Y3P4 386 aa10.24□□□□□ -0.77
CHD4-203ENST00000535717 F5H5P2 479 aa10.23□□□□□ -0.77
CHD4-203ENST00000535717 TPD52L2O43399 206 aaKnown RBP10.23□□□□□ -0.77
CHD4-203ENST00000535717 CDK1P06493 297 aa10.23□□□□□ -0.77
CHD4-203ENST00000535717 HTR1AP08908 422 aa10.23□□□□□ -0.77
CHD4-203ENST00000535717 CCDC159P0C7I6 412 aa10.23□□□□□ -0.77
CHD4-203ENST00000535717 TNFSF4P23510 183 aa10.23□□□□□ -0.77
CHD4-203ENST00000535717 COL8A2P25067 703 aa10.23□□□□□ -0.77
CHD4-203ENST00000535717 CLEC2AQ6UVW9 174 aa10.23□□□□□ -0.77
CHD4-203ENST00000535717 SPNS3Q6ZMD2 512 aa10.23□□□□□ -0.77
CHD4-203ENST00000535717 TMPRSS11AQ6ZMR5 421 aa10.23□□□□□ -0.77
CHD4-203ENST00000535717 ZNF786Q8N393 782 aa10.23□□□□□ -0.77
CHD4-203ENST00000535717 KLHL36Q8N4N3 616 aa10.23□□□□□ -0.77
CHD4-203ENST00000535717 CSNK2A3Q8NEV1 391 aa10.23□□□□□ -0.77
CHD4-203ENST00000535717 RDH5Q92781 318 aa10.23□□□□□ -0.77
CHD4-203ENST00000535717 DVL3Q92997 716 aaPredicted RBP10.23□□□□□ -0.77
CHD4-203ENST00000535717 YIPF5Q969M3 257 aa10.23□□□□□ -0.77
CHD4-203ENST00000535717 OR2V2Q96R30 315 aa10.23□□□□□ -0.77
CHD4-203ENST00000535717 EGLN1Q9GZT9 426 aa10.23□□□□□ -0.77
CHD4-203ENST00000535717 SLC22A4Q9H015 551 aa10.23□□□□□ -0.77
CHD4-203ENST00000535717 DUSP21Q9H596 190 aa10.23□□□□□ -0.77
CHD4-203ENST00000535717 PPP1R3EQ9H7J1 279 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms