RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 IRF2P14316 349 aa8.35□□□□□ -1.07
CLSTN3-203ENST00000534830 MMP9P14780 707 aa8.35□□□□□ -1.07
CLSTN3-203ENST00000534830 ZNF3P17036 446 aa8.35□□□□□ -1.07
CLSTN3-203ENST00000534830 GRK5P34947 590 aa8.35□□□□□ -1.07
CLSTN3-203ENST00000534830 DDOSTP39656 456 aa8.35□□□□□ -1.07
CLSTN3-203ENST00000534830 GRB2P62993 217 aaKnown RBP8.35□□□□□ -1.07
CLSTN3-203ENST00000534830 FAM3AP98173 230 aa8.35□□□□□ -1.07
CLSTN3-203ENST00000534830 KLHL12Q53G59 568 aa8.35□□□□□ -1.07
CLSTN3-203ENST00000534830 TEX36Q5VZQ5 186 aa8.35□□□□□ -1.07
CLSTN3-203ENST00000534830 NLRC3Q7RTR2 1065 aa8.35□□□□□ -1.07
CLSTN3-203ENST00000534830 ADGRG5Q8IZF4 528 aa8.35□□□□□ -1.07
CLSTN3-203ENST00000534830 PARP8Q8N3A8 854 aa8.35□□□□□ -1.07
CLSTN3-203ENST00000534830 GCSAMQ8N6F7 178 aa8.35□□□□□ -1.07
CLSTN3-203ENST00000534830 KIR3DL3Q8N743 410 aa8.35□□□□□ -1.07
CLSTN3-203ENST00000534830 OR56B2PQ8NGI1 322 aa8.35□□□□□ -1.07
CLSTN3-203ENST00000534830 GIPC3Q8TF64 312 aa8.35□□□□□ -1.07
CLSTN3-203ENST00000534830 WFDC12Q8WWY7 111 aa8.35□□□□□ -1.07
CLSTN3-203ENST00000534830 SGK3Q96BR1 496 aa8.35□□□□□ -1.07
CLSTN3-203ENST00000534830 CLPTM1LQ96KA5 538 aa8.35□□□□□ -1.07
CLSTN3-203ENST00000534830 FEVQ99581 238 aa8.35□□□□□ -1.07
CLSTN3-203ENST00000534830 ADAT1Q9BUB4 502 aaKnown RBP8.35□□□□□ -1.07
CLSTN3-203ENST00000534830 CHID1Q9BWS9 393 aa8.35□□□□□ -1.07
CLSTN3-203ENST00000534830 MED20Q9H944 212 aa8.35□□□□□ -1.07
CLSTN3-203ENST00000534830 FN3KRPQ9HA64 309 aa8.35□□□□□ -1.07
CLSTN3-203ENST00000534830 CENPMQ9NSP4 180 aa8.35□□□□□ -1.07
CLSTN3-203ENST00000534830 ZNF319Q9P2F9 582 aa8.35□□□□□ -1.07
CLSTN3-203ENST00000534830 CLN8Q9UBY8 286 aa8.35□□□□□ -1.07
CLSTN3-203ENST00000534830 hCG_38984A0A1B0GV85 526 aa8.34□□□□□ -1.07
CLSTN3-203ENST00000534830 FAM183AA6NL82 134 aa8.34□□□□□ -1.07
CLSTN3-203ENST00000534830 AQP12BA6NM10 295 aa8.34□□□□□ -1.07
CLSTN3-203ENST00000534830 NDUFA2O43678 99 aa8.34□□□□□ -1.07
CLSTN3-203ENST00000534830 CST1P01037 141 aa8.34□□□□□ -1.07
CLSTN3-203ENST00000534830 IFNGP01579 166 aa8.34□□□□□ -1.07
CLSTN3-203ENST00000534830 CFHR2P36980 270 aa8.34□□□□□ -1.07
CLSTN3-203ENST00000534830 OPRL1P41146 370 aa8.34□□□□□ -1.07
CLSTN3-203ENST00000534830 SLC15A1P46059 708 aa8.34□□□□□ -1.07
CLSTN3-203ENST00000534830 CX3CR1P49238 355 aa8.34□□□□□ -1.07
CLSTN3-203ENST00000534830 BPIFB3P59826 476 aa8.34□□□□□ -1.07
CLSTN3-203ENST00000534830 CDK5Q00535 292 aa8.34□□□□□ -1.07
CLSTN3-203ENST00000534830 EIF2B1Q14232 305 aaKnown RBP8.34□□□□□ -1.07
CLSTN3-203ENST00000534830 SLC9A3R2Q15599 337 aa8.34□□□□□ -1.07
CLSTN3-203ENST00000534830 KCNJ8Q15842 424 aa8.34□□□□□ -1.07
CLSTN3-203ENST00000534830 SFRP4Q6FHJ7 346 aaPredicted RBP8.34□□□□□ -1.07
CLSTN3-203ENST00000534830 ZNF826PQ6ZT77 177 aa8.34□□□□□ -1.07
CLSTN3-203ENST00000534830 KRT74Q7RTS7 529 aa8.34□□□□□ -1.07
CLSTN3-203ENST00000534830 SLC16A9Q7RTY1 509 aa8.34□□□□□ -1.07
CLSTN3-203ENST00000534830 DPY19L4Q7Z388 723 aa8.34□□□□□ -1.07
CLSTN3-203ENST00000534830 WDR86Q86TI4 376 aa8.34□□□□□ -1.07
CLSTN3-203ENST00000534830 AQP12AQ8IXF9 295 aa8.34□□□□□ -1.07
CLSTN3-203ENST00000534830 IQCF1Q8N6M8 205 aa8.34□□□□□ -1.07
CLSTN3-203ENST00000534830 CCDC197Q8NCU1 140 aa8.34□□□□□ -1.07
CLSTN3-203ENST00000534830 OR6K6Q8NGW6 343 aa8.34□□□□□ -1.07
CLSTN3-203ENST00000534830 CANT1Q8WVQ1 401 aa8.34□□□□□ -1.07
CLSTN3-203ENST00000534830 INTS14Q96SY0 518 aa8.34□□□□□ -1.07
CLSTN3-203ENST00000534830 AMELYQ99218 206 aa8.34□□□□□ -1.07
CLSTN3-203ENST00000534830 RBM4BQ9BQ04 359 aaKnown RBP8.34□□□□□ -1.07
CLSTN3-203ENST00000534830 ABHD6Q9BV23 337 aa8.34□□□□□ -1.07
CLSTN3-203ENST00000534830 MS4A7Q9GZW8 240 aaPredicted RBP8.34□□□□□ -1.07
CLSTN3-203ENST00000534830 KAAG1Q9UBP8 84 aa8.34□□□□□ -1.07
CLSTN3-203ENST00000534830 MMP24Q9Y5R2 645 aa8.34□□□□□ -1.07
CLSTN3-203ENST00000534830 IGHV3OR16-10A0A075B7F0 116 aa8.33□□□□□ -1.08
CLSTN3-203ENST00000534830 TRAV38-1A0A0B4J264 116 aa8.33□□□□□ -1.08
CLSTN3-203ENST00000534830 TRAV40A0A0B4J280 105 aa8.33□□□□□ -1.08
CLSTN3-203ENST00000534830 OOEPA6NGQ2 149 aa8.33□□□□□ -1.08
CLSTN3-203ENST00000534830 RIIAD1A6NNX1 92 aa8.33□□□□□ -1.08
CLSTN3-203ENST00000534830 ENSAO43768 121 aaKnown RBP8.33□□□□□ -1.08
CLSTN3-203ENST00000534830 APOC1P02654 83 aa8.33□□□□□ -1.08
CLSTN3-203ENST00000534830 LIPFP07098 398 aa8.33□□□□□ -1.08
CLSTN3-203ENST00000534830 VSIG8P0DPA2 414 aa8.33□□□□□ -1.08
CLSTN3-203ENST00000534830 GSTT1P30711 240 aa8.33□□□□□ -1.08
CLSTN3-203ENST00000534830 MTNR1AP48039 350 aa8.33□□□□□ -1.08
CLSTN3-203ENST00000534830 ZNF121P58317 390 aaPredicted RBP8.33□□□□□ -1.08
CLSTN3-203ENST00000534830 FGF12P61328 243 aa8.33□□□□□ -1.08
CLSTN3-203ENST00000534830 MZT1Q08AG7 82 aa8.33□□□□□ -1.08
CLSTN3-203ENST00000534830 TAF13Q15543 124 aa8.33□□□□□ -1.08
CLSTN3-203ENST00000534830 C11orf91Q3C1V1 193 aa8.33□□□□□ -1.08
CLSTN3-203ENST00000534830 SHFQ7M4L6 423 aa8.33□□□□□ -1.08
CLSTN3-203ENST00000534830 FAM90A1Q86YD7 464 aa8.33□□□□□ -1.08
CLSTN3-203ENST00000534830 ERI1Q8IV48 349 aaKnown RBP8.33□□□□□ -1.08
CLSTN3-203ENST00000534830 OR6N2Q8NGY6 317 aa8.33□□□□□ -1.08
CLSTN3-203ENST00000534830 TEX47Q8TBZ9 253 aa8.33□□□□□ -1.08
CLSTN3-203ENST00000534830 REEP6Q96HR9 211 aa8.33□□□□□ -1.08
CLSTN3-203ENST00000534830 CITED1Q99966 193 aa8.33□□□□□ -1.08
CLSTN3-203ENST00000534830 THTPAQ9BU02 230 aa8.33□□□□□ -1.08
CLSTN3-203ENST00000534830 TLNRD1Q9H1K6 362 aa8.33□□□□□ -1.08
CLSTN3-203ENST00000534830 PPP1R3EQ9H7J1 279 aa8.33□□□□□ -1.08
CLSTN3-203ENST00000534830 SP140LQ9H930 580 aa8.33□□□□□ -1.08
CLSTN3-203ENST00000534830 RNPEPL1Q9HAU8 725 aa8.33□□□□□ -1.08
CLSTN3-203ENST00000534830 BEX1Q9HBH7 125 aa8.33□□□□□ -1.08
CLSTN3-203ENST00000534830 SMURF1Q9HCE7 757 aa8.33□□□□□ -1.08
CLSTN3-203ENST00000534830 TRIM36Q9NQ86 728 aa8.33□□□□□ -1.08
CLSTN3-203ENST00000534830 C1orf123Q9NWV4 160 aa8.33□□□□□ -1.08
CLSTN3-203ENST00000534830 ERVK-18Q9QC07 812 aa8.33□□□□□ -1.08
CLSTN3-203ENST00000534830 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.32□□□□□ -1.08
CLSTN3-203ENST00000534830 A0A1B0GUS0 222 aa8.32□□□□□ -1.08
CLSTN3-203ENST00000534830 MDFIC2A0A1B0GVS7 189 aa8.32□□□□□ -1.08
CLSTN3-203ENST00000534830 TCRBV3S1A0A5B6 114 aa8.32□□□□□ -1.08
CLSTN3-203ENST00000534830 ZNF879B4DU55 563 aa8.32□□□□□ -1.08
CLSTN3-203ENST00000534830 C3orf80F5H4A9 247 aa8.32□□□□□ -1.08
CLSTN3-203ENST00000534830 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms