RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 BAMBIQ13145 260 aa12.88□□□□□ -0.35
CPSF1-211ENST00000533492 FLOT2Q14254 428 aa12.88□□□□□ -0.35
CPSF1-211ENST00000533492 KLHL12Q53G59 568 aa12.88□□□□□ -0.35
CPSF1-211ENST00000533492 PLBD1Q6P4A8 553 aa12.88□□□□□ -0.35
CPSF1-211ENST00000533492 FAM57BQ71RH2 274 aa12.88□□□□□ -0.35
CPSF1-211ENST00000533492 RHOUQ7L0Q8 258 aa12.88□□□□□ -0.35
CPSF1-211ENST00000533492 SLC16A9Q7RTY1 509 aa12.88□□□□□ -0.35
CPSF1-211ENST00000533492 TMEM179BQ7Z7N9 219 aa12.88□□□□□ -0.35
CPSF1-211ENST00000533492 PARP8Q8N3A8 854 aa12.88□□□□□ -0.35
CPSF1-211ENST00000533492 OR52H1Q8NGJ2 320 aa12.88□□□□□ -0.35
CPSF1-211ENST00000533492 BCAS4Q8TDM0 211 aa12.88□□□□□ -0.35
CPSF1-211ENST00000533492 RNF133Q8WVZ7 376 aa12.88□□□□□ -0.35
CPSF1-211ENST00000533492 SPSB4Q96A44 273 aa12.88□□□□□ -0.35
CPSF1-211ENST00000533492 SGK3Q96BR1 496 aa12.88□□□□□ -0.35
CPSF1-211ENST00000533492 ZMYND19Q96E35 227 aaPredicted RBP12.88□□□□□ -0.35
CPSF1-211ENST00000533492 REEP6Q96HR9 211 aa12.88□□□□□ -0.35
CPSF1-211ENST00000533492 PGAM5Q96HS1 289 aa12.88□□□□□ -0.35
CPSF1-211ENST00000533492 TECTBQ96PL2 329 aa12.88□□□□□ -0.35
CPSF1-211ENST00000533492 TEX12Q9BXU0 123 aa12.88□□□□□ -0.35
CPSF1-211ENST00000533492 OR10A2Q9H208 303 aa12.88□□□□□ -0.35
CPSF1-211ENST00000533492 OOEPA6NGQ2 149 aa12.87□□□□□ -0.35
CPSF1-211ENST00000533492 ENSAO43768 121 aaKnown RBP12.87□□□□□ -0.35
CPSF1-211ENST00000533492 IGHV4-38-2P0DP08 117 aa12.87□□□□□ -0.35
CPSF1-211ENST00000533492 OSMP13725 252 aa12.87□□□□□ -0.35
CPSF1-211ENST00000533492 ANXA8P13928 327 aa12.87□□□□□ -0.35
CPSF1-211ENST00000533492 PRTN3P24158 256 aa12.87□□□□□ -0.35
CPSF1-211ENST00000533492 PSMB10P40306 273 aa12.87□□□□□ -0.35
CPSF1-211ENST00000533492 ZNF121P58317 390 aaPredicted RBP12.87□□□□□ -0.35
CPSF1-211ENST00000533492 FAM3AP98173 230 aa12.87□□□□□ -0.35
CPSF1-211ENST00000533492 GFOD2Q3B7J2 385 aa12.87□□□□□ -0.35
CPSF1-211ENST00000533492 CD276Q5ZPR3 534 aa12.87□□□□□ -0.35
CPSF1-211ENST00000533492 ZNF826PQ6ZT77 177 aa12.87□□□□□ -0.35
CPSF1-211ENST00000533492 TIGD4Q8IY51 512 aa12.87□□□□□ -0.35
CPSF1-211ENST00000533492 THEM6Q8WUY1 208 aa12.87□□□□□ -0.35
CPSF1-211ENST00000533492 UPRTQ96BW1 309 aa12.87□□□□□ -0.35
CPSF1-211ENST00000533492 DUX5Q96PT3 197 aa12.87□□□□□ -0.35
CPSF1-211ENST00000533492 MARCH7Q9H992 704 aa12.87□□□□□ -0.35
CPSF1-211ENST00000533492 TRAV40A0A0B4J280 105 aa12.86□□□□□ -0.35
CPSF1-211ENST00000533492 ADAM20O43506 726 aa12.86□□□□□ -0.35
CPSF1-211ENST00000533492 LYNP07948 512 aa12.86□□□□□ -0.35
CPSF1-211ENST00000533492 PRKACGP22612 351 aa12.86□□□□□ -0.35
CPSF1-211ENST00000533492 GNALP38405 381 aa12.86□□□□□ -0.35
CPSF1-211ENST00000533492 OPRL1P41146 370 aa12.86□□□□□ -0.35
CPSF1-211ENST00000533492 RPS7P62081 194 aaKnown RBP12.86□□□□□ -0.35
CPSF1-211ENST00000533492 CBX1P83916 185 aa12.86□□□□□ -0.35
CPSF1-211ENST00000533492 HOXA4Q00056 320 aaPredicted RBP12.86□□□□□ -0.35
CPSF1-211ENST00000533492 SNCBQ16143 134 aa12.86□□□□□ -0.35
CPSF1-211ENST00000533492 ZNF841Q6ZN19 808 aa12.86□□□□□ -0.35
CPSF1-211ENST00000533492 CPOQ8IVL8 374 aa12.86□□□□□ -0.35
CPSF1-211ENST00000533492 HS3ST5Q8IZT8 346 aa12.86□□□□□ -0.35
CPSF1-211ENST00000533492 ZNF454Q8N9F8 522 aa12.86□□□□□ -0.35
CPSF1-211ENST00000533492 CSNK2A3Q8NEV1 391 aa12.86□□□□□ -0.35
CPSF1-211ENST00000533492 DACT3Q96B18 629 aaPredicted RBP12.86□□□□□ -0.35
CPSF1-211ENST00000533492 AMELYQ99218 206 aa12.86□□□□□ -0.35
CPSF1-211ENST00000533492 ZMAT3Q9HA38 289 aaKnown RBP12.86□□□□□ -0.35
CPSF1-211ENST00000533492 NBEAL1Q6ZS30 2694 aa12.86□□□□□ -0.35
CPSF1-211ENST00000533492 ANK2Q01484 3957 aa12.85□□□□□ -0.35
CPSF1-211ENST00000533492 DNAJC9-AS1A6NH13 148 aa12.85□□□□□ -0.35
CPSF1-211ENST00000533492 PRODHO43272 600 aa12.85□□□□□ -0.35
CPSF1-211ENST00000533492 SELENOFO60613 162 aa12.85□□□□□ -0.35
CPSF1-211ENST00000533492 FKBP6O75344 327 aa12.85□□□□□ -0.35
CPSF1-211ENST00000533492 GYPAP02724 150 aa12.85□□□□□ -0.35
CPSF1-211ENST00000533492 LIPFP07098 398 aa12.85□□□□□ -0.35
CPSF1-211ENST00000533492 GSK3AP49840 483 aa12.85□□□□□ -0.35
CPSF1-211ENST00000533492 FGF12P61328 243 aa12.85□□□□□ -0.35
CPSF1-211ENST00000533492 CDK5Q00535 292 aa12.85□□□□□ -0.35
CPSF1-211ENST00000533492 FOXL1Q12952 345 aa12.85□□□□□ -0.35
CPSF1-211ENST00000533492 TUSC1Q2TAM9 212 aa12.85□□□□□ -0.35
CPSF1-211ENST00000533492 AWAT1Q58HT5 328 aa12.85□□□□□ -0.35
CPSF1-211ENST00000533492 PRSS45Q7RTY3 260 aa12.85□□□□□ -0.35
CPSF1-211ENST00000533492 FTMTQ8N4E7 242 aa12.85□□□□□ -0.35
CPSF1-211ENST00000533492 GCSAMQ8N6F7 178 aa12.85□□□□□ -0.35
CPSF1-211ENST00000533492 OTOSQ8NHW6 89 aa12.85□□□□□ -0.35
CPSF1-211ENST00000533492 SLC25A28Q96A46 364 aa12.85□□□□□ -0.35
CPSF1-211ENST00000533492 ZNF48Q96MX3 618 aaPredicted RBP12.85□□□□□ -0.35
CPSF1-211ENST00000533492 PAPOLGQ9BWT3 736 aaKnown RBP12.85□□□□□ -0.35
CPSF1-211ENST00000533492 RGCCQ9H4X1 137 aa12.85□□□□□ -0.35
CPSF1-211ENST00000533492 KIF17Q9P2E2 1029 aa12.85□□□□□ -0.35
CPSF1-211ENST00000533492 DNAJB9Q9UBS3 223 aa12.85□□□□□ -0.35
CPSF1-211ENST00000533492 TENM1Q9UKZ4 2725 aa12.84□□□□□ -0.35
CPSF1-211ENST00000533492 hCG_38984A0A1B0GV85 526 aa12.84□□□□□ -0.35
CPSF1-211ENST00000533492 ANXA2P2A6NMY6 339 aa12.84□□□□□ -0.35
CPSF1-211ENST00000533492 C22orf46C9J442 243 aa12.84□□□□□ -0.35
CPSF1-211ENST00000533492 TIPRLO75663 272 aa12.84□□□□□ -0.35
CPSF1-211ENST00000533492 DNAJC8O75937 253 aaPredicted RBP12.84□□□□□ -0.35
CPSF1-211ENST00000533492 PLATP00750 562 aa12.84□□□□□ -0.35
CPSF1-211ENST00000533492 HKR1P10072 659 aa12.84□□□□□ -0.35
CPSF1-211ENST00000533492 NAA10P41227 235 aaPredicted RBP12.84□□□□□ -0.35
CPSF1-211ENST00000533492 POU4F2Q12837 409 aa12.84□□□□□ -0.35
CPSF1-211ENST00000533492 SLC35D3Q5M8T2 416 aa12.84□□□□□ -0.35
CPSF1-211ENST00000533492 GPR157Q5UAW9 335 aa12.84□□□□□ -0.35
CPSF1-211ENST00000533492 C9orf139Q6ZV77 190 aa12.84□□□□□ -0.35
CPSF1-211ENST00000533492 PNLDC1Q8NA58 520 aaKnown RBP12.84□□□□□ -0.35
CPSF1-211ENST00000533492 OR1M1Q8NGA1 313 aa12.84□□□□□ -0.35
CPSF1-211ENST00000533492 LRRC29Q8WV35 223 aa12.84□□□□□ -0.35
CPSF1-211ENST00000533492 MICU1Q9BPX6 476 aa12.84□□□□□ -0.35
CPSF1-211ENST00000533492 PCGF1Q9BSM1 259 aa12.84□□□□□ -0.35
CPSF1-211ENST00000533492 RASSF4Q9H2L5 321 aa12.84□□□□□ -0.35
CPSF1-211ENST00000533492 RNPEPL1Q9HAU8 725 aa12.84□□□□□ -0.35
CPSF1-211ENST00000533492 ZNF319Q9P2F9 582 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms