RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 PSMA6P60900 246 aaKnown RBP12.92□□□□□ -0.34
CPSF1-210ENST00000532935 PRAMEF6Q5VXH4 476 aa12.92□□□□□ -0.34
CPSF1-210ENST00000532935 KCTD18Q6PI47 426 aaPredicted RBP12.92□□□□□ -0.34
CPSF1-210ENST00000532935 DEGS2Q6QHC5 323 aa12.92□□□□□ -0.34
CPSF1-210ENST00000532935 KLBQ86Z14 1044 aa12.92□□□□□ -0.34
CPSF1-210ENST00000532935 KLHL36Q8N4N3 616 aa12.92□□□□□ -0.34
CPSF1-210ENST00000532935 PACRGLQ8N7B6 248 aa12.92□□□□□ -0.34
CPSF1-210ENST00000532935 DVL3Q92997 716 aaPredicted RBP12.92□□□□□ -0.34
CPSF1-210ENST00000532935 ERGIC1Q969X5 290 aa12.92□□□□□ -0.34
CPSF1-210ENST00000532935 MROQ9BYG7 248 aa12.92□□□□□ -0.34
CPSF1-210ENST00000532935 RGCCQ9H4X1 137 aa12.92□□□□□ -0.34
CPSF1-210ENST00000532935 PCDHB10Q9UN67 800 aa12.92□□□□□ -0.34
CPSF1-210ENST00000532935 TMEM14AQ9Y6G1 99 aa12.92□□□□□ -0.34
CPSF1-210ENST00000532935 ANKRD30BLA7E2S9 258 aa12.91□□□□□ -0.34
CPSF1-210ENST00000532935 PRR32B1ATL7 298 aa12.91□□□□□ -0.34
CPSF1-210ENST00000532935 PSMD9O00233 223 aa12.91□□□□□ -0.34
CPSF1-210ENST00000532935 EI24O14681 340 aa12.91□□□□□ -0.34
CPSF1-210ENST00000532935 ZNF205O95201 554 aa12.91□□□□□ -0.34
CPSF1-210ENST00000532935 PTBP3O95758 552 aaKnown RBP12.91□□□□□ -0.34
CPSF1-210ENST00000532935 GSK3AP49840 483 aa12.91□□□□□ -0.34
CPSF1-210ENST00000532935 ROM1Q03395 351 aa12.91□□□□□ -0.34
CPSF1-210ENST00000532935 MPPED2Q15777 294 aa12.91□□□□□ -0.34
CPSF1-210ENST00000532935 C1orf87Q8N0U7 546 aa12.91□□□□□ -0.34
CPSF1-210ENST00000532935 MUC20Q8N307 709 aaPredicted RBP12.91□□□□□ -0.34
CPSF1-210ENST00000532935 SPERTQ8NA61 448 aa12.91□□□□□ -0.34
CPSF1-210ENST00000532935 OR8B12Q8NGG6 310 aa12.91□□□□□ -0.34
CPSF1-210ENST00000532935 Q8TCH9 128 aa12.91□□□□□ -0.34
CPSF1-210ENST00000532935 ASB17Q8WXJ9 295 aa12.91□□□□□ -0.34
CPSF1-210ENST00000532935 OR8B4Q96RC9 309 aa12.91□□□□□ -0.34
CPSF1-210ENST00000532935 PATZ1Q9HBE1 687 aaKnown RBP12.91□□□□□ -0.34
CPSF1-210ENST00000532935 ADGRL4Q9HBW9 690 aa12.91□□□□□ -0.34
CPSF1-210ENST00000532935 G6PC2Q9NQR9 355 aa12.91□□□□□ -0.34
CPSF1-210ENST00000532935 UFSP2Q9NUQ7 469 aa12.91□□□□□ -0.34
CPSF1-210ENST00000532935 HAO2Q9NYQ3 351 aa12.91□□□□□ -0.34
CPSF1-210ENST00000532935 USE1Q9NZ43 259 aa12.91□□□□□ -0.34
CPSF1-210ENST00000532935 ORC6Q9Y5N6 252 aa12.91□□□□□ -0.34
CPSF1-210ENST00000532935 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.9□□□□□ -0.34
CPSF1-210ENST00000532935 FAM20BO75063 409 aa12.9□□□□□ -0.34
CPSF1-210ENST00000532935 ZNF254O75437 659 aa12.9□□□□□ -0.34
CPSF1-210ENST00000532935 IRF2P14316 349 aa12.9□□□□□ -0.34
CPSF1-210ENST00000532935 ALDH3A2P51648 485 aa12.9□□□□□ -0.34
CPSF1-210ENST00000532935 LCN2P80188 198 aa12.9□□□□□ -0.34
CPSF1-210ENST00000532935 MZT1Q08AG7 82 aa12.9□□□□□ -0.34
CPSF1-210ENST00000532935 FAHD2BQ6P2I3 314 aaPredicted RBP12.9□□□□□ -0.34
CPSF1-210ENST00000532935 SLC35F2Q8IXU6 374 aa12.9□□□□□ -0.34
CPSF1-210ENST00000532935 ZNF679Q8IYX0 411 aa12.9□□□□□ -0.34
CPSF1-210ENST00000532935 RFLNBQ8N5W9 214 aa12.9□□□□□ -0.34
CPSF1-210ENST00000532935 PLPP7Q8NBV4 271 aa12.9□□□□□ -0.34
CPSF1-210ENST00000532935 CSNK2A3Q8NEV1 391 aa12.9□□□□□ -0.34
CPSF1-210ENST00000532935 OR8J1Q8NGP2 316 aa12.9□□□□□ -0.34
CPSF1-210ENST00000532935 OR11L1Q8NGX0 322 aa12.9□□□□□ -0.34
CPSF1-210ENST00000532935 FAHD2AQ96GK7 314 aa12.9□□□□□ -0.34
CPSF1-210ENST00000532935 MNTQ99583 582 aa12.9□□□□□ -0.34
CPSF1-210ENST00000532935 C9orf16Q9BUW7 83 aa12.9□□□□□ -0.34
CPSF1-210ENST00000532935 TTTY10Q9BZA0 68 aa12.9□□□□□ -0.34
CPSF1-210ENST00000532935 FN3KRPQ9HA64 309 aa12.9□□□□□ -0.34
CPSF1-210ENST00000532935 TMEM165Q9HC07 324 aa12.9□□□□□ -0.34
CPSF1-210ENST00000532935 FAM206AQ9NX38 181 aa12.9□□□□□ -0.34
CPSF1-210ENST00000532935 WARS2Q9UGM6 360 aaKnown RBP12.9□□□□□ -0.34
CPSF1-210ENST00000532935 IKZF2Q9UKS7 526 aa12.9□□□□□ -0.34
CPSF1-210ENST00000532935 COL6A5A8TX70 2615 aa12.9□□□□□ -0.35
CPSF1-210ENST00000532935 DNHD1Q96M86 4753 aa12.89□□□□□ -0.35
CPSF1-210ENST00000532935 PPIAL4EA0A075B759 164 aa12.89□□□□□ -0.35
CPSF1-210ENST00000532935 A0A0G2JMP0 313 aa12.89□□□□□ -0.35
CPSF1-210ENST00000532935 A0A0X1KG70 313 aa12.89□□□□□ -0.35
CPSF1-210ENST00000532935 TMEM269A0A1B0GVZ9 245 aa12.89□□□□□ -0.35
CPSF1-210ENST00000532935 ACOD1A6NK06 481 aa12.89□□□□□ -0.35
CPSF1-210ENST00000532935 CEACAM18A8MTB9 384 aa12.89□□□□□ -0.35
CPSF1-210ENST00000532935 F5H0A9 414 aaPredicted RBP12.89□□□□□ -0.35
CPSF1-210ENST00000532935 PPIAL4DF5H284 164 aa12.89□□□□□ -0.35
CPSF1-210ENST00000532935 PHYHO14832 338 aa12.89□□□□□ -0.35
CPSF1-210ENST00000532935 FOXH1O75593 365 aa12.89□□□□□ -0.35
CPSF1-210ENST00000532935 FSTL3O95633 263 aa12.89□□□□□ -0.35
CPSF1-210ENST00000532935 PNPP00491 289 aa12.89□□□□□ -0.35
CPSF1-210ENST00000532935 PPIAL4FP0DN26 164 aa12.89□□□□□ -0.35
CPSF1-210ENST00000532935 PEX2P28328 305 aa12.89□□□□□ -0.35
CPSF1-210ENST00000532935 HTR1FP30939 366 aa12.89□□□□□ -0.35
CPSF1-210ENST00000532935 DCTDP32321 178 aa12.89□□□□□ -0.35
CPSF1-210ENST00000532935 SRP14P37108 136 aaKnown RBP12.89□□□□□ -0.35
CPSF1-210ENST00000532935 RIDAP52758 137 aaKnown RBP12.89□□□□□ -0.35
CPSF1-210ENST00000532935 CDC42P60953 191 aa12.89□□□□□ -0.35
CPSF1-210ENST00000532935 CXCR4P61073 352 aa12.89□□□□□ -0.35
CPSF1-210ENST00000532935 OR8B8Q15620 311 aa12.89□□□□□ -0.35
CPSF1-210ENST00000532935 FAM201AQ5SY85 155 aa12.89□□□□□ -0.35
CPSF1-210ENST00000532935 ZNF322Q6U7Q0 402 aaPredicted RBP12.89□□□□□ -0.35
CPSF1-210ENST00000532935 CBR4Q8N4T8 237 aa12.89□□□□□ -0.35
CPSF1-210ENST00000532935 OR4M2Q8NGB6 313 aa12.89□□□□□ -0.35
CPSF1-210ENST00000532935 OR51G2Q8NGK0 314 aa12.89□□□□□ -0.35
CPSF1-210ENST00000532935 OR8S1Q8NH09 359 aa12.89□□□□□ -0.35
CPSF1-210ENST00000532935 EME1Q96AY2 570 aa12.89□□□□□ -0.35
CPSF1-210ENST00000532935 LYZL4Q96KX0 146 aa12.89□□□□□ -0.35
CPSF1-210ENST00000532935 C14orf119Q9NWQ9 140 aa12.89□□□□□ -0.35
CPSF1-210ENST00000532935 CLN6Q9NWW5 311 aa12.89□□□□□ -0.35
CPSF1-210ENST00000532935 ZNF391Q9UJN7 358 aa12.89□□□□□ -0.35
CPSF1-210ENST00000532935 RHBDD3Q9Y3P4 386 aa12.89□□□□□ -0.35
CPSF1-210ENST00000532935 PPIAL4AQ9Y536 164 aa12.89□□□□□ -0.35
CPSF1-210ENST00000532935 ZNF670-ZNF695F2Z2N8 137 aa12.88□□□□□ -0.35
CPSF1-210ENST00000532935 GRPP07492 148 aa12.88□□□□□ -0.35
CPSF1-210ENST00000532935 ACKR3P25106 362 aa12.88□□□□□ -0.35
CPSF1-210ENST00000532935 ZFP36P26651 326 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms