RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 ZNF321PQ8N8H1 164 aa6.12□□□□□ -1.43
TGFBR3-209ENST00000532540 TMEM229BQ8NBD8 167 aa6.12□□□□□ -1.43
TGFBR3-209ENST00000532540 OR13D1Q8NGV5 346 aa6.12□□□□□ -1.43
TGFBR3-209ENST00000532540 ZNF596Q8TC21 504 aa6.12□□□□□ -1.43
TGFBR3-209ENST00000532540 SFXN5Q8TD22 340 aa6.12□□□□□ -1.43
TGFBR3-209ENST00000532540 CDS1Q92903 461 aa6.12□□□□□ -1.43
TGFBR3-209ENST00000532540 RBM18Q96H35 190 aaKnown RBP6.12□□□□□ -1.43
TGFBR3-209ENST00000532540 LRFN3Q9BTN0 628 aa6.12□□□□□ -1.43
TGFBR3-209ENST00000532540 CHST6Q9GZX3 395 aa6.12□□□□□ -1.43
TGFBR3-209ENST00000532540 ZNF552Q9H707 407 aaPredicted RBP6.12□□□□□ -1.43
TGFBR3-209ENST00000532540 SRA1Q9HD15 236 aaKnown RBP6.12□□□□□ -1.43
TGFBR3-209ENST00000532540 LHX9Q9NQ69 397 aa6.12□□□□□ -1.43
TGFBR3-209ENST00000532540 DMRT3Q9NQL9 472 aa6.12□□□□□ -1.43
TGFBR3-209ENST00000532540 SERINC1Q9NRX5 453 aa6.12□□□□□ -1.43
TGFBR3-209ENST00000532540 OR5V1Q9UGF6 321 aa6.12□□□□□ -1.43
TGFBR3-209ENST00000532540 OR52A1Q9UKL2 312 aa6.12□□□□□ -1.43
TGFBR3-209ENST00000532540 AKAP6Q13023 2319 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 A0A0A6YYC8 382 aaPredicted RBP6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 FITM1A5D6W6 292 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 I3L1I5 382 aaPredicted RBP6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 PEX12O00623 359 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 PRKNO60260 465 aaPredicted RBP6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 NDUFB2O95178 105 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 C1orf105O95561 183 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 IGHA1P01876 353 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 OR5AC1P0C628 307 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 OR10J1P30954 320 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 SLC35A1P78382 337 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 PPP1R1AQ13522 171 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 FAM69BQ5VUD6 431 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 PWWP2BQ6NUJ5 590 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 PRSS54Q6PEW0 395 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 FIGLAQ6QHK4 219 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 TMEM182Q6ZP80 229 aaPredicted RBP6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 TMPPEQ6ZT21 453 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 ZNF100Q8IYN0 542 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 DND1Q8IYX4 353 aaKnown RBP6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 SLC22A18ASQ8N1D0 253 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 NUP43Q8NFH3 380 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 OR4K15Q8NH41 348 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 ASB11Q8WXH4 323 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 PPP1R14AQ96A00 147 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 CMBLQ96DG6 245 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 C2orf50Q96LR7 162 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 TMEM9BQ9NQ34 198 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 SLC2A9Q9NRM0 540 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 FRYLO94915 3013 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 MDC1Q14676 2089 aaKnown RBP6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 SPTBN1Q01082 2364 aaKnown RBP6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 C1orf226A1L170 272 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 FAM171A2A8MVW0 826 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 HMGN2P05204 90 aaKnown RBP6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 SLC17A1Q14916 467 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 HERPUD1Q15011 391 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 ATP6V1FQ16864 119 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 STAC2Q6ZMT1 411 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 SLC16A14Q7RTX9 510 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 VRK2Q86Y07 508 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 MFSD9Q8NBP5 474 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 OR5R1Q8NH85 324 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 SARGQ9BW04 601 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 PARD6GQ9BYG4 376 aaPredicted RBP6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 C1orf123Q9NWV4 160 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 IER3IP1Q9Y5U9 82 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 WSB1Q9Y6I7 421 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 TRAV27A0A087WT01 109 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 FTCDNL1E5RQL4 147 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 FFAR1O14842 300 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 ZNF823P16415 610 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 ERVFC1-1P60608 527 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 SUMO1P63165 101 aaKnown RBP6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 CSNK2A1P68400 391 aaPredicted RBP6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 ZNF266Q14584 549 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 ACOT6Q3I5F7 207 aaPredicted RBP6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 MESTQ5EB52 335 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 KCTD18Q6PI47 426 aaPredicted RBP6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 C19orf47Q8N9M1 422 aaKnown RBP6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 CSNK2A3Q8NEV1 391 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 OR2G3Q8NGZ4 309 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 SLC41A2Q96JW4 573 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 TAAR9Q96RI9 348 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 TMEM208Q9BTX3 173 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 ADAM19Q9H013 955 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 DUSP15Q9H1R2 295 aaPredicted RBP6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 PLEKHA2Q9HB19 425 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 FOXJ2Q9P0K8 574 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 RNF24Q9Y225 148 aa6.11□□□□□ -1.43
TGFBR3-209ENST00000532540 MASP2O00187 686 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 PIAS2O75928 621 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 CD74P04233 296 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 ADRA2AP08913 450 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 TFPIP10646 304 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 EPHA1P21709 976 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 MST1P26927 711 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 THBS4P35443 961 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 YPEL5P62699 121 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 TIAL1Q01085 375 aaKnown RBP eCLIP6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 PDE7AQ13946 482 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 TMEM164Q5U3C3 297 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 ADAMTSL4Q6UY14 1074 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms