RNA–Protein interactions for RNA: ENST00000532339.1

CD44-235, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-235ENST00000532339 OR10A7Q8NGE5 316 aa2.77□□□□□ -1.97
CD44-235ENST00000532339 OR51G2Q8NGK0 314 aa2.77□□□□□ -1.97
CD44-235ENST00000532339 OR5D13Q8NGL4 314 aa2.77□□□□□ -1.97
CD44-235ENST00000532339 VN1R17PQ8TDU5 208 aa2.77□□□□□ -1.97
CD44-235ENST00000532339 C8orf76Q96K31 380 aa2.77□□□□□ -1.97
CD44-235ENST00000532339 ZBTB18Q99592 522 aa2.77□□□□□ -1.97
CD44-235ENST00000532339 TMEM43Q9BTV4 400 aa2.77□□□□□ -1.97
CD44-235ENST00000532339 CLSTN2Q9H4D0 955 aa2.77□□□□□ -1.97
CD44-235ENST00000532339 GLIPR2Q9H4G4 154 aa2.77□□□□□ -1.97
CD44-235ENST00000532339 SLC17A5Q9NRA2 495 aa2.77□□□□□ -1.97
CD44-235ENST00000532339 DCAF16Q9NXF7 216 aa2.77□□□□□ -1.97
CD44-235ENST00000532339 SLC17A7Q9P2U7 560 aa2.77□□□□□ -1.97
CD44-235ENST00000532339 RSPH14Q9UHP6 348 aa2.77□□□□□ -1.97
CD44-235ENST00000532339 NUP50Q9UKX7 468 aa2.77□□□□□ -1.97
CD44-235ENST00000532339 RPL26L1Q9UNX3 145 aaKnown RBP2.77□□□□□ -1.97
CD44-235ENST00000532339 SAMD4AQ9UPU9 718 aaKnown RBP2.77□□□□□ -1.97
CD44-235ENST00000532339 FSIP2Q5CZC0 6907 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 UBXN8O00124 270 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 ABCD4O14678 606 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 MED7O43513 233 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 TRAF3IP2O43734 574 aaPredicted RBP2.76□□□□□ -1.97
CD44-235ENST00000532339 TSC22D2O75157 780 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 RHBDL1O75783 438 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 TRAPPC6AO75865 159 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 C1QAP02745 245 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 PNMTP11086 282 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 GCKP35557 465 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 PAX2Q02962 417 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 EGFEM1PQ0D2K5 195 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 DDX39BQ13838 428 aaKnown RBP2.76□□□□□ -1.97
CD44-235ENST00000532339 KCNJ11Q14654 390 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 SLC22A6Q4U2R8 563 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 OPN5Q6U736 354 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 ENPP6Q6UWR7 440 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 CCDC80Q76M96 950 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 C16orf62Q7Z3J2 963 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 MED12LQ86YW9 2145 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 PIANPQ8IYJ0 282 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 BBS5Q8N3I7 341 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 DHRSXQ8N5I4 330 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 CSNK1A1LQ8N752 337 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 BHLHE23Q8NDY6 225 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 KLHL30-AS1Q8NEE0 82 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 WFDC9Q8NEX5 89 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 SDR9C7Q8NEX9 313 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 B3GNT7Q8NFL0 401 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 OR51Q1Q8NH59 317 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 MCOLN3Q8TDD5 553 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 TFB1MQ8WVM0 346 aaKnown RBP2.76□□□□□ -1.97
CD44-235ENST00000532339 TRUB1Q8WWH5 349 aaKnown RBP2.76□□□□□ -1.97
CD44-235ENST00000532339 IL1F10Q8WWZ1 152 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 TFGQ92734 400 aaPredicted RBP2.76□□□□□ -1.97
CD44-235ENST00000532339 TSLPQ969D9 159 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 S100PBPQ96BU1 408 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 ISOC1Q96CN7 298 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 OR5B2Q96R09 309 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 CCDC77Q9BR77 488 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 DPH7Q9BTV6 452 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 CAPS2Q9BXY5 557 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 NXF5Q9H1B4 397 aaKnown RBP2.76□□□□□ -1.97
CD44-235ENST00000532339 OR52A5Q9H2C5 316 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 PPDPFQ9H3Y8 114 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 MIEF1Q9NQG6 463 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 TNFRSF19Q9NS68 423 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 IL36GQ9NZH8 169 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 OPN4Q9UHM6 478 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 LCMT1Q9UIC8 334 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 RIMS3Q9UJD0 308 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 POLDIP2Q9Y2S7 368 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 AK6Q9Y3D8 172 aaKnown RBP2.76□□□□□ -1.97
CD44-235ENST00000532339 NAALAD2Q9Y3Q0 740 aa2.76□□□□□ -1.97
CD44-235ENST00000532339 LRP1BQ9NZR2 4599 aa2.75□□□□□ -1.97
CD44-235ENST00000532339 IGHV3-35A0A0C4DH35 117 aa2.75□□□□□ -1.97
CD44-235ENST00000532339 GOLGA8QA0A0J9YX86 632 aa2.75□□□□□ -1.97
CD44-235ENST00000532339 GOLGA8OA6NCC3 632 aa2.75□□□□□ -1.97
CD44-235ENST00000532339 SLC22A20A6NK97 555 aa2.75□□□□□ -1.97
CD44-235ENST00000532339 GOLGA8NF8WBI6 632 aa2.75□□□□□ -1.97
CD44-235ENST00000532339 H0YGG7 62 aa2.75□□□□□ -1.97
CD44-235ENST00000532339 GFYI3L273 518 aa2.75□□□□□ -1.97
CD44-235ENST00000532339 GOLGA8RI6L899 631 aa2.75□□□□□ -1.97
CD44-235ENST00000532339 TXNDC9O14530 226 aa2.75□□□□□ -1.97
CD44-235ENST00000532339 STX10O60499 249 aa2.75□□□□□ -1.97
CD44-235ENST00000532339 NSA2O95478 260 aaKnown RBP2.75□□□□□ -1.97
CD44-235ENST00000532339 LY6G6CO95867 125 aa2.75□□□□□ -1.97
CD44-235ENST00000532339 IGHG4P01861 327 aa2.75□□□□□ -1.97
CD44-235ENST00000532339 DBTP11182 482 aaKnown RBP2.75□□□□□ -1.97
CD44-235ENST00000532339 STARP49675 285 aa2.75□□□□□ -1.97
CD44-235ENST00000532339 MAXP61244 160 aa2.75□□□□□ -1.97
CD44-235ENST00000532339 CUL1Q13616 776 aa2.75□□□□□ -1.97
CD44-235ENST00000532339 DOC2AQ14183 400 aa2.75□□□□□ -1.97
CD44-235ENST00000532339 HERPUD1Q15011 391 aa2.75□□□□□ -1.97
CD44-235ENST00000532339 ZMYND11Q15326 602 aa2.75□□□□□ -1.97
CD44-235ENST00000532339 BCL7AQ4VC05 210 aa2.75□□□□□ -1.97
CD44-235ENST00000532339 TP53I3Q53FA7 332 aa2.75□□□□□ -1.97
CD44-235ENST00000532339 RSBN1Q5VWQ0 802 aaPredicted RBP2.75□□□□□ -1.97
CD44-235ENST00000532339 SLC22A10Q63ZE4 541 aa2.75□□□□□ -1.97
CD44-235ENST00000532339 SBSNQ6UWP8 590 aa2.75□□□□□ -1.97
CD44-235ENST00000532339 PRSS41Q7RTY9 318 aa2.75□□□□□ -1.97
CD44-235ENST00000532339 MCOLN2Q8IZK6 566 aa2.75□□□□□ -1.97
CD44-235ENST00000532339 ZNF786Q8N393 782 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms