RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 GPER1Q99527 375 aa15.16■□□□□ 0.02
BRCA2-204ENST00000530893 PHB2Q99623 299 aa15.16■□□□□ 0.02
BRCA2-204ENST00000530893 SF3B5Q9BWJ5 86 aaKnown RBP15.16■□□□□ 0.02
BRCA2-204ENST00000530893 CST11Q9H112 138 aa15.16■□□□□ 0.02
BRCA2-204ENST00000530893 ZNF160Q9HCG1 818 aa15.16■□□□□ 0.02
BRCA2-204ENST00000530893 RDH8Q9NYR8 311 aa15.16■□□□□ 0.02
BRCA2-204ENST00000530893 NUP50Q9UKX7 468 aa15.16■□□□□ 0.02
BRCA2-204ENST00000530893 TRIOBPQ9H2D6 2365 aa15.16■□□□□ 0.02
BRCA2-204ENST00000530893 TRAV14DV4A0A0A6YYC5 116 aa15.16■□□□□ 0.02
BRCA2-204ENST00000530893 OR5H14A6NHG9 310 aa15.16■□□□□ 0.02
BRCA2-204ENST00000530893 DHHO43323 396 aa15.16■□□□□ 0.02
BRCA2-204ENST00000530893 MPIG6BO95866 241 aa15.16■□□□□ 0.02
BRCA2-204ENST00000530893 SLC25A4P12235 298 aa15.16■□□□□ 0.02
BRCA2-204ENST00000530893 OTX1P32242 354 aaPredicted RBP15.16■□□□□ 0.02
BRCA2-204ENST00000530893 OR3A4PP47883 348 aa15.16■□□□□ 0.02
BRCA2-204ENST00000530893 ENDOGQ14249 297 aaKnown RBP15.16■□□□□ 0.02
BRCA2-204ENST00000530893 ZNF345Q14585 488 aa15.16■□□□□ 0.02
BRCA2-204ENST00000530893 VAX1Q5SQQ9 334 aa15.16■□□□□ 0.02
BRCA2-204ENST00000530893 SFRP5Q5T4F7 317 aa15.16■□□□□ 0.02
BRCA2-204ENST00000530893 ZNF546Q86UE3 836 aa15.16■□□□□ 0.02
BRCA2-204ENST00000530893 ARRDC1Q8N5I2 433 aa15.16■□□□□ 0.02
BRCA2-204ENST00000530893 TMEM104Q8NE00 496 aa15.16■□□□□ 0.02
BRCA2-204ENST00000530893 OR2I1PQ8NGU4 316 aa15.16■□□□□ 0.02
BRCA2-204ENST00000530893 OR4K15Q8NH41 348 aa15.16■□□□□ 0.02
BRCA2-204ENST00000530893 NABP1Q96AH0 204 aa15.16■□□□□ 0.02
BRCA2-204ENST00000530893 NICN1Q9BSH3 213 aa15.16■□□□□ 0.02
BRCA2-204ENST00000530893 SOX7Q9BT81 388 aa15.16■□□□□ 0.02
BRCA2-204ENST00000530893 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.16■□□□□ 0.02
BRCA2-204ENST00000530893 COMMD9Q9P000 198 aa15.16■□□□□ 0.02
BRCA2-204ENST00000530893 FOXD3Q9UJU5 478 aaPredicted RBP15.16■□□□□ 0.02
BRCA2-204ENST00000530893 FBXO4Q9UKT5 387 aa15.16■□□□□ 0.02
BRCA2-204ENST00000530893 V9GYS6 101 aa15.16■□□□□ 0.02
BRCA2-204ENST00000530893 C9orf170A2RU37 121 aa15.15■□□□□ 0.02
BRCA2-204ENST00000530893 DHRS3O75911 302 aa15.15■□□□□ 0.02
BRCA2-204ENST00000530893 MPGP29372 298 aa15.15■□□□□ 0.02
BRCA2-204ENST00000530893 ZNF84P51523 738 aa15.15■□□□□ 0.02
BRCA2-204ENST00000530893 IL13RA1P78552 427 aa15.15■□□□□ 0.02
BRCA2-204ENST00000530893 MAML2Q8IZL2 1156 aaPredicted RBP15.15■□□□□ 0.02
BRCA2-204ENST00000530893 RBPMSQ93062 196 aaKnown RBP15.15■□□□□ 0.02
BRCA2-204ENST00000530893 ZNF385AQ96PM9 386 aaKnown RBP15.15■□□□□ 0.02
BRCA2-204ENST00000530893 OCSTAMPQ9BR26 566 aa15.15■□□□□ 0.02
BRCA2-204ENST00000530893 FLVCR1Q9Y5Y0 555 aa15.15■□□□□ 0.02
BRCA2-204ENST00000530893 A0A0A6YYD4 124 aa15.14■□□□□ 0.01
BRCA2-204ENST00000530893 hCG_1807616A0A1W2PRN6 198 aa15.14■□□□□ 0.01
BRCA2-204ENST00000530893 B4E171 279 aa15.14■□□□□ 0.01
BRCA2-204ENST00000530893 MTRF1O75570 445 aaKnown RBP15.14■□□□□ 0.01
BRCA2-204ENST00000530893 DUS4LO95620 317 aaKnown RBP15.14■□□□□ 0.01
BRCA2-204ENST00000530893 WDPCPO95876 746 aa15.14■□□□□ 0.01
BRCA2-204ENST00000530893 GP1BAP07359 652 aa15.14■□□□□ 0.01
BRCA2-204ENST00000530893 NMBP08949 121 aa15.14■□□□□ 0.01
BRCA2-204ENST00000530893 ICAM2P13598 275 aa15.14■□□□□ 0.01
BRCA2-204ENST00000530893 MGMTP16455 207 aa15.14■□□□□ 0.01
BRCA2-204ENST00000530893 HOXD11P31277 338 aaPredicted RBP15.14■□□□□ 0.01
BRCA2-204ENST00000530893 TSPAN7P41732 249 aa15.14■□□□□ 0.01
BRCA2-204ENST00000530893 ARPC4P59998 168 aa15.14■□□□□ 0.01
BRCA2-204ENST00000530893 PPP1R1AQ13522 171 aa15.14■□□□□ 0.01
BRCA2-204ENST00000530893 HOGA1Q86XE5 327 aa15.14■□□□□ 0.01
BRCA2-204ENST00000530893 FAM89BQ8N5H3 189 aa15.14■□□□□ 0.01
BRCA2-204ENST00000530893 LRRC20Q8TCA0 184 aa15.14■□□□□ 0.01
BRCA2-204ENST00000530893 PCNPQ8WW12 178 aaKnown RBP15.14■□□□□ 0.01
BRCA2-204ENST00000530893 SPACA5Q96QH8 159 aa15.14■□□□□ 0.01
BRCA2-204ENST00000530893 PDCD10Q9BUL8 212 aa15.14■□□□□ 0.01
BRCA2-204ENST00000530893 SLC39A1Q9NY26 324 aa15.14■□□□□ 0.01
BRCA2-204ENST00000530893 COLQQ9Y215 455 aaPredicted RBP15.14■□□□□ 0.01
BRCA2-204ENST00000530893 IGKV1-9A0A0C4DH69 117 aa15.14■□□□□ 0.01
BRCA2-204ENST00000530893 CEACAM18A8MTB9 384 aa15.14■□□□□ 0.01
BRCA2-204ENST00000530893 OR2F2O95006 317 aa15.14■□□□□ 0.01
BRCA2-204ENST00000530893 OR2F1Q13607 317 aa15.14■□□□□ 0.01
BRCA2-204ENST00000530893 ARL6IP1Q15041 203 aa15.14■□□□□ 0.01
BRCA2-204ENST00000530893 KISS1Q15726 138 aa15.14■□□□□ 0.01
BRCA2-204ENST00000530893 GFOD2Q3B7J2 385 aa15.14■□□□□ 0.01
BRCA2-204ENST00000530893 SLC22A6Q4U2R8 563 aa15.14■□□□□ 0.01
BRCA2-204ENST00000530893 PLAC9Q5JTB6 97 aa15.14■□□□□ 0.01
BRCA2-204ENST00000530893 PHYHD1Q5SRE7 291 aa15.14■□□□□ 0.01
BRCA2-204ENST00000530893 RGS7BPQ6MZT1 257 aaPredicted RBP15.14■□□□□ 0.01
BRCA2-204ENST00000530893 C11orf87Q6NUJ2 197 aa15.14■□□□□ 0.01
BRCA2-204ENST00000530893 SLC23A3Q6PIS1 610 aa15.14■□□□□ 0.01
BRCA2-204ENST00000530893 C17orf107Q6ZR85 190 aa15.14■□□□□ 0.01
BRCA2-204ENST00000530893 SUN5Q8TC36 379 aa15.14■□□□□ 0.01
BRCA2-204ENST00000530893 KCNE4Q8WWG9 221 aa15.14■□□□□ 0.01
BRCA2-204ENST00000530893 FBXW5Q969U6 566 aa15.14■□□□□ 0.01
BRCA2-204ENST00000530893 OR2AT4A6NND4 320 aa15.13■□□□□ 0.01
BRCA2-204ENST00000530893 MFNGO00587 321 aa15.13■□□□□ 0.01
BRCA2-204ENST00000530893 SOCS1O15524 211 aa15.13■□□□□ 0.01
BRCA2-204ENST00000530893 EFSO43281 561 aa15.13■□□□□ 0.01
BRCA2-204ENST00000530893 CRTAPO75718 401 aaPredicted RBP15.13■□□□□ 0.01
BRCA2-204ENST00000530893 NAT2P11245 290 aa15.13■□□□□ 0.01
BRCA2-204ENST00000530893 SRD5A2P31213 254 aa15.13■□□□□ 0.01
BRCA2-204ENST00000530893 RAC3P60763 192 aa15.13■□□□□ 0.01
BRCA2-204ENST00000530893 RPS27AP62979 156 aaKnown RBP15.13■□□□□ 0.01
BRCA2-204ENST00000530893 MRPS34P82930 218 aaKnown RBP15.13■□□□□ 0.01
BRCA2-204ENST00000530893 TRIM61Q5EBN2 209 aa15.13■□□□□ 0.01
BRCA2-204ENST00000530893 FAM27BQ5VT28 67 aa15.13■□□□□ 0.01
BRCA2-204ENST00000530893 SIGIRRQ6IA17 410 aa15.13■□□□□ 0.01
BRCA2-204ENST00000530893 C20orf196Q8IYI0 205 aa15.13■□□□□ 0.01
BRCA2-204ENST00000530893 TERB2Q8NHR7 220 aa15.13■□□□□ 0.01
BRCA2-204ENST00000530893 SPTSSAQ969W0 71 aa15.13■□□□□ 0.01
BRCA2-204ENST00000530893 WBP1Q96G27 269 aa15.13■□□□□ 0.01
BRCA2-204ENST00000530893 LYZL4Q96KX0 146 aa15.13■□□□□ 0.01
BRCA2-204ENST00000530893 JSRP1Q96MG2 331 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms