RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 PRKDCP78527 4128 aaKnown RBP12.26□□□□□ -0.45
CAPN1-219ENST00000530495 A0A1B0GW55 424 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 BTBD17A6NE02 478 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 TVP23AA6NH52 213 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 ANKRD30BLA7E2S9 258 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 RNASEK-C17orf49H0YIS7 233 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.25□□□□□ -0.45
CAPN1-219ENST00000530495 XRCC2O43543 280 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 CCDC22O60826 627 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 SEMG1P04279 462 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 CSF1P09603 554 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 DUX4L2P0CJ85 424 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 DUX4L3P0CJ86 424 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 DUX4L4P0CJ87 422 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 DUX4L5P0CJ88 424 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 DUX4L6P0CJ89 424 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 DUX4L7P0CJ90 424 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 PSKH1P11801 424 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 IFNGR2P38484 337 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 TGM4P49221 684 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 PRKXP51817 358 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 PSME3P61289 254 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 ELF3P78545 371 aaPredicted RBP12.25□□□□□ -0.45
CAPN1-219ENST00000530495 TSPAN31Q12999 210 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 WDR38Q5JTN6 314 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 DUX4L9Q6RFH8 374 aaPredicted RBP12.25□□□□□ -0.45
CAPN1-219ENST00000530495 SLC36A1Q7Z2H8 476 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 DCXRQ7Z4W1 244 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 WDR86Q86TI4 376 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 CMTM4Q8IZR5 234 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 LNX2Q8N448 690 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 Q8N7P7 452 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 PROKR2Q8NFJ6 384 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 OR8S1Q8NH09 359 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 GNPDA2Q8TDQ7 276 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 LRRC29Q8WV35 223 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 C12orf43Q96C57 262 aaKnown RBP12.25□□□□□ -0.45
CAPN1-219ENST00000530495 PYURFQ96I23 114 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 COPS4Q9BT78 406 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 ONECUT1Q9UBC0 465 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 DUX4Q9UBX2 424 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 FBLN5Q9UBX5 448 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 PRPF19Q9UMS4 504 aaKnown RBP12.25□□□□□ -0.45
CAPN1-219ENST00000530495 ZNF281Q9Y2X9 895 aa12.25□□□□□ -0.45
CAPN1-219ENST00000530495 TET2Q6N021 2002 aaPredicted RBP12.25□□□□□ -0.45
CAPN1-219ENST00000530495 NPFFO15130 113 aa12.24□□□□□ -0.45
CAPN1-219ENST00000530495 NDUFB3O43676 98 aa12.24□□□□□ -0.45
CAPN1-219ENST00000530495 GMNNO75496 209 aa12.24□□□□□ -0.45
CAPN1-219ENST00000530495 TIPRLO75663 272 aa12.24□□□□□ -0.45
CAPN1-219ENST00000530495 SASH3O75995 380 aa12.24□□□□□ -0.45
CAPN1-219ENST00000530495 SLC2A1P11166 492 aa12.24□□□□□ -0.45
CAPN1-219ENST00000530495 EEF1B2P24534 225 aaKnown RBP12.24□□□□□ -0.45
CAPN1-219ENST00000530495 FAM3AP98173 230 aa12.24□□□□□ -0.45
CAPN1-219ENST00000530495 SPIBQ01892 262 aa12.24□□□□□ -0.45
CAPN1-219ENST00000530495 EGR3Q06889 387 aa12.24□□□□□ -0.45
CAPN1-219ENST00000530495 TAF13Q15543 124 aa12.24□□□□□ -0.45
CAPN1-219ENST00000530495 TEX30Q5JUR7 227 aa12.24□□□□□ -0.45
CAPN1-219ENST00000530495 ATPAF1Q5TC12 328 aaPredicted RBP12.24□□□□□ -0.45
CAPN1-219ENST00000530495 SLC35E4Q6ICL7 350 aa12.24□□□□□ -0.45
CAPN1-219ENST00000530495 WDR82Q6UXN9 313 aa12.24□□□□□ -0.45
CAPN1-219ENST00000530495 C1orf122Q6ZSJ8 110 aa12.24□□□□□ -0.45
CAPN1-219ENST00000530495 DPY19L4Q7Z388 723 aa12.24□□□□□ -0.45
CAPN1-219ENST00000530495 ZDHHC21Q8IVQ6 265 aa12.24□□□□□ -0.45
CAPN1-219ENST00000530495 GALNT4Q8N4A0 578 aa12.24□□□□□ -0.45
CAPN1-219ENST00000530495 CYB561A3Q8NBI2 242 aa12.24□□□□□ -0.45
CAPN1-219ENST00000530495 OR1M1Q8NGA1 313 aa12.24□□□□□ -0.45
CAPN1-219ENST00000530495 C8orf46Q8TAG6 207 aa12.24□□□□□ -0.45
CAPN1-219ENST00000530495 SGK3Q96BR1 496 aa12.24□□□□□ -0.45
CAPN1-219ENST00000530495 SLAMF6Q96DU3 332 aa12.24□□□□□ -0.45
CAPN1-219ENST00000530495 DCTN5Q9BTE1 182 aa12.24□□□□□ -0.45
CAPN1-219ENST00000530495 SIRT7Q9NRC8 400 aa12.24□□□□□ -0.45
CAPN1-219ENST00000530495 CENPMQ9NSP4 180 aa12.24□□□□□ -0.45
CAPN1-219ENST00000530495 CD300AQ9UGN4 299 aa12.24□□□□□ -0.45
CAPN1-219ENST00000530495 N6AMT1Q9Y5N5 214 aa12.24□□□□□ -0.45
CAPN1-219ENST00000530495 ZNF593O00488 134 aaPredicted RBP12.23□□□□□ -0.45
CAPN1-219ENST00000530495 H2AFXP16104 143 aaPredicted RBP12.23□□□□□ -0.45
CAPN1-219ENST00000530495 AMY2BP19961 511 aa12.23□□□□□ -0.45
CAPN1-219ENST00000530495 NAA10P41227 235 aaPredicted RBP12.23□□□□□ -0.45
CAPN1-219ENST00000530495 RPL13AP3Q6NVV1 102 aa12.23□□□□□ -0.45
CAPN1-219ENST00000530495 LYPD4Q6UWN0 246 aa12.23□□□□□ -0.45
CAPN1-219ENST00000530495 SLC16A9Q7RTY1 509 aa12.23□□□□□ -0.45
CAPN1-219ENST00000530495 FAM216BQ8N7L0 139 aa12.23□□□□□ -0.45
CAPN1-219ENST00000530495 OR51L1Q8NGJ5 315 aa12.23□□□□□ -0.45
CAPN1-219ENST00000530495 OR5R1Q8NH85 324 aa12.23□□□□□ -0.45
CAPN1-219ENST00000530495 TNFRSF14Q92956 283 aa12.23□□□□□ -0.45
CAPN1-219ENST00000530495 TLNRD1Q9H1K6 362 aa12.23□□□□□ -0.45
CAPN1-219ENST00000530495 CCDC134Q9H6E4 229 aa12.23□□□□□ -0.45
CAPN1-219ENST00000530495 EGLN3Q9H6Z9 239 aa12.23□□□□□ -0.45
CAPN1-219ENST00000530495 SPAG4Q9NPE6 437 aa12.23□□□□□ -0.45
CAPN1-219ENST00000530495 ARGLU1Q9NWB6 273 aaPredicted RBP12.23□□□□□ -0.45
CAPN1-219ENST00000530495 COMMD3-BMI1R4GMX3 469 aa12.23□□□□□ -0.45
CAPN1-219ENST00000530495 ZNF878C9JN71 531 aa12.22□□□□□ -0.45
CAPN1-219ENST00000530495 ACOT8O14734 319 aa12.22□□□□□ -0.45
CAPN1-219ENST00000530495 SPARCP09486 303 aa12.22□□□□□ -0.45
CAPN1-219ENST00000530495 RRM2P31350 389 aa12.22□□□□□ -0.45
CAPN1-219ENST00000530495 FMO3P31513 532 aa12.22□□□□□ -0.45
CAPN1-219ENST00000530495 SLC15A1P46059 708 aa12.22□□□□□ -0.45
CAPN1-219ENST00000530495 ENTPD1P49961 510 aa12.22□□□□□ -0.45
CAPN1-219ENST00000530495 CSNK2BP67870 215 aa12.22□□□□□ -0.45
CAPN1-219ENST00000530495 PRB3Q04118 309 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms