RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 ZNF823P16415 610 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 SPI1P17947 270 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 PCMT1P22061 227 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 ANOS1P23352 680 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 PEX2P28328 305 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 GRK5P34947 590 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 RGS6P49758 472 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 LOXL3P58215 753 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 IL13RA1P78552 427 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 CDK5Q00535 292 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 CDK5R2Q13319 367 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 GINS1Q14691 196 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 HLXQ14774 488 aaPredicted RBP7.13□□□□□ -1.27
SSBP3-212ENST00000528930 CCBE1Q6UXH8 406 aaPredicted RBP7.13□□□□□ -1.27
SSBP3-212ENST00000528930 FBXW12Q6X9E4 464 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 Q6ZR03 302 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 USP51Q70EK9 711 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 PROKR2Q8NFJ6 384 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 OR2AJ1Q8NGZ0 328 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 CLDND2Q8NHS1 167 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 TEX47Q8TBZ9 253 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 TRUB1Q8WWH5 349 aaKnown RBP7.13□□□□□ -1.27
SSBP3-212ENST00000528930 APOBEC3DQ96AK3 386 aaPredicted RBP7.13□□□□□ -1.27
SSBP3-212ENST00000528930 EME1Q96AY2 570 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 COG8Q96MW5 612 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 PITX2Q99697 317 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 ATF6BQ99941 703 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 C1QTNF5Q9BXJ0 243 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 MED20Q9H944 212 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 DECR2Q9NUI1 292 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 RHBDL2Q9NX52 303 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 PTTG3PQ9NZH4 202 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 KCNG2Q9UJ96 466 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 ZDHHC8Q9ULC8 765 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 MYRFQ9Y2G1 1151 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 TANC2Q9HCD6 1990 aa7.12□□□□□ -1.27
SSBP3-212ENST00000528930 FAM183AA6NL82 134 aa7.12□□□□□ -1.27
SSBP3-212ENST00000528930 F5H5K5 113 aa7.12□□□□□ -1.27
SSBP3-212ENST00000528930 PPIHO43447 177 aaKnown RBP7.12□□□□□ -1.27
SSBP3-212ENST00000528930 TIMM8AO60220 97 aaPredicted RBP7.12□□□□□ -1.27
SSBP3-212ENST00000528930 TIPRLO75663 272 aa7.12□□□□□ -1.27
SSBP3-212ENST00000528930 IFNGP01579 166 aa7.12□□□□□ -1.27
SSBP3-212ENST00000528930 PRB2P02812 416 aaPredicted RBP7.12□□□□□ -1.27
SSBP3-212ENST00000528930 RPLP1P05386 114 aaKnown RBP7.12□□□□□ -1.27
SSBP3-212ENST00000528930 OSMP13725 252 aa7.12□□□□□ -1.27
SSBP3-212ENST00000528930 ANXA8P13928 327 aa7.12□□□□□ -1.27
SSBP3-212ENST00000528930 RAC2P15153 192 aa7.12□□□□□ -1.27
SSBP3-212ENST00000528930 FMO3P31513 532 aa7.12□□□□□ -1.27
SSBP3-212ENST00000528930 OTX1P32242 354 aaPredicted RBP7.12□□□□□ -1.27
SSBP3-212ENST00000528930 ENTPD1P49961 510 aa7.12□□□□□ -1.27
SSBP3-212ENST00000528930 DAPP51397 102 aa7.12□□□□□ -1.27
SSBP3-212ENST00000528930 BCAP31P51572 246 aa7.12□□□□□ -1.27
SSBP3-212ENST00000528930 DVL1P1P54792 670 aaPredicted RBP7.12□□□□□ -1.27
SSBP3-212ENST00000528930 CDH15P55291 814 aa7.12□□□□□ -1.27
SSBP3-212ENST00000528930 LMO4P61968 165 aa7.12□□□□□ -1.27
SSBP3-212ENST00000528930 ECH1Q13011 328 aa7.12□□□□□ -1.27
SSBP3-212ENST00000528930 HNRNPA0Q13151 305 aaKnown RBP7.12□□□□□ -1.27
SSBP3-212ENST00000528930 SPCS2Q15005 226 aa7.12□□□□□ -1.27
SSBP3-212ENST00000528930 TEX30Q5JUR7 227 aa7.12□□□□□ -1.27
SSBP3-212ENST00000528930 LPCAT4Q643R3 524 aa7.12□□□□□ -1.27
SSBP3-212ENST00000528930 OR2T2Q6IF00 324 aa7.12□□□□□ -1.27
SSBP3-212ENST00000528930 SLC27A4Q6P1M0 643 aa7.12□□□□□ -1.27
SSBP3-212ENST00000528930 SHQ1Q6PI26 577 aaKnown RBP7.12□□□□□ -1.27
SSBP3-212ENST00000528930 RHOUQ7L0Q8 258 aa7.12□□□□□ -1.27
SSBP3-212ENST00000528930 DCXRQ7Z4W1 244 aa7.12□□□□□ -1.27
SSBP3-212ENST00000528930 OR5L1Q8NGL2 311 aa7.12□□□□□ -1.27
SSBP3-212ENST00000528930 MRAPQ8TCY5 172 aa7.12□□□□□ -1.27
SSBP3-212ENST00000528930 PYDC1Q8WXC3 89 aa7.12□□□□□ -1.27
SSBP3-212ENST00000528930 NRBF2Q96F24 287 aa7.12□□□□□ -1.27
SSBP3-212ENST00000528930 ELMOD3Q96FG2 381 aa7.12□□□□□ -1.27
SSBP3-212ENST00000528930 DIRC2Q96SL1 478 aa7.12□□□□□ -1.27
SSBP3-212ENST00000528930 BCL7BQ9BQE9 202 aa7.12□□□□□ -1.27
SSBP3-212ENST00000528930 ANKRD60Q9BZ19 345 aa7.12□□□□□ -1.27
SSBP3-212ENST00000528930 MARCH7Q9H992 704 aa7.12□□□□□ -1.27
SSBP3-212ENST00000528930 SAP30LQ9HAJ7 183 aa7.12□□□□□ -1.27
SSBP3-212ENST00000528930 DDX28Q9NUL7 540 aaKnown RBP7.12□□□□□ -1.27
SSBP3-212ENST00000528930 TREM2Q9NZC2 230 aa7.12□□□□□ -1.27
SSBP3-212ENST00000528930 A0A1B0GWJ7 208 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 FUOMA2VDF0 154 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 C5orf63A6NC05 138 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 RIIAD1A6NNX1 92 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 IQCF6A8MYZ5 107 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 M0QZ24 198 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 ZNF593O00488 134 aaPredicted RBP7.11□□□□□ -1.27
SSBP3-212ENST00000528930 SURF4O15260 269 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 MLNRO43193 412 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 TPD52L2O43399 206 aaKnown RBP7.11□□□□□ -1.27
SSBP3-212ENST00000528930 GLCEO94923 617 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 RNASE1P07998 156 aaKnown RBP7.11□□□□□ -1.27
SSBP3-212ENST00000528930 ZNF3P17036 446 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 DCKP27707 260 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 POU1F1P28069 291 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 BLVRAP53004 296 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 TPTEP56180 551 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 TNFAIP6P98066 277 aaPredicted RBP7.11□□□□□ -1.27
SSBP3-212ENST00000528930 MVKQ03426 396 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 GK2Q14410 553 aaPredicted RBP7.11□□□□□ -1.27
SSBP3-212ENST00000528930 HFEQ30201 348 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 ZMAT1Q5H9K5 638 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 AVPI1Q5T686 147 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms