RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 LDAHQ9H6V9 325 aa12.93□□□□□ -0.34
ECHDC1-220ENST00000528402 ZNF552Q9H707 407 aaPredicted RBP12.93□□□□□ -0.34
ECHDC1-220ENST00000528402 MED13Q9UHV7 2174 aa12.93□□□□□ -0.34
ECHDC1-220ENST00000528402 TRGV5A0A0B4J1U4 118 aa12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 A8MV72 311 aaPredicted RBP12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 CD74P04233 296 aa12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 CELA3AP09093 270 aa12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 PTHLHP12272 177 aa12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 B4GALT1P15291 398 aa12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 PSG4Q00888 419 aa12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 TCF15Q12870 199 aa12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 FAPQ12884 760 aa12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 UNC119Q13432 240 aa12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 TNK1Q13470 666 aa12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 FCN2Q15485 313 aa12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 LINC00303Q3SY05 128 aa12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 CDNFQ49AH0 187 aa12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 ZBTB37Q5TC79 503 aa12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 TSPO2Q5TGU0 170 aa12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 RTL6Q6ICC9 239 aa12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 ZNF774Q6NX45 483 aa12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 IGFL2Q6UWQ7 119 aa12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 GLDNQ6ZMI3 551 aaPredicted RBP12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 NAA40Q86UY6 237 aa12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 STEAP2Q8NFT2 490 aa12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 OR4C16Q8NGL9 310 aa12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 SLC39A7Q92504 469 aa12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 APH1AQ96BI3 265 aa12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 RNF170Q96K19 258 aa12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 DMRTB1Q96MA1 342 aa12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 S100A13Q99584 98 aa12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 PRDM14Q9GZV8 571 aa12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 WNT5BQ9H1J7 359 aa12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 OR10A4Q9H209 315 aa12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 ZDHHC11Q9H8X9 412 aa12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 NPDC1Q9NQX5 325 aaPredicted RBP12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 GLRX2Q9NS18 164 aa12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 ZNF224Q9NZL3 707 aa12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 SCP2D1Q9UJQ7 156 aa12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 PIGLQ9Y2B2 252 aa12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 ZNF175Q9Y473 711 aa12.92□□□□□ -0.34
ECHDC1-220ENST00000528402 A6NL46 340 aa12.91□□□□□ -0.34
ECHDC1-220ENST00000528402 DISC1C4P0D8 188 aa12.91□□□□□ -0.34
ECHDC1-220ENST00000528402 RGS13O14921 159 aa12.91□□□□□ -0.34
ECHDC1-220ENST00000528402 ARPC1BO15143 372 aaKnown RBP12.91□□□□□ -0.34
ECHDC1-220ENST00000528402 XRCC2O43543 280 aa12.91□□□□□ -0.34
ECHDC1-220ENST00000528402 SSNA1O43805 119 aa12.91□□□□□ -0.34
ECHDC1-220ENST00000528402 RAB3DO95716 219 aa12.91□□□□□ -0.34
ECHDC1-220ENST00000528402 LCATP04180 440 aa12.91□□□□□ -0.34
ECHDC1-220ENST00000528402 MMP7P09237 267 aaPredicted RBP12.91□□□□□ -0.34
ECHDC1-220ENST00000528402 SULT1A3P0DMM9 295 aa12.91□□□□□ -0.34
ECHDC1-220ENST00000528402 SULT1A4P0DMN0 295 aa12.91□□□□□ -0.34
ECHDC1-220ENST00000528402 NAT2P11245 290 aa12.91□□□□□ -0.34
ECHDC1-220ENST00000528402 FCGR2AP12318 317 aa12.91□□□□□ -0.34
ECHDC1-220ENST00000528402 MPZP25189 248 aa12.91□□□□□ -0.34
ECHDC1-220ENST00000528402 RFC3P40938 356 aa12.91□□□□□ -0.34
ECHDC1-220ENST00000528402 NBL1P41271 181 aa12.91□□□□□ -0.34
ECHDC1-220ENST00000528402 PTGFRP43088 359 aa12.91□□□□□ -0.34
ECHDC1-220ENST00000528402 CBX5P45973 191 aa12.91□□□□□ -0.34
ECHDC1-220ENST00000528402 HTR5AP47898 357 aa12.91□□□□□ -0.34
ECHDC1-220ENST00000528402 TNFSF10P50591 281 aa12.91□□□□□ -0.34
ECHDC1-220ENST00000528402 CNN3Q15417 329 aaKnown RBP12.91□□□□□ -0.34
ECHDC1-220ENST00000528402 KISS1Q15726 138 aa12.91□□□□□ -0.34
ECHDC1-220ENST00000528402 NDUFA5Q16718 116 aa12.91□□□□□ -0.34
ECHDC1-220ENST00000528402 GFOD2Q3B7J2 385 aa12.91□□□□□ -0.34
ECHDC1-220ENST00000528402 Q6ZTK2 550 aa12.91□□□□□ -0.34
ECHDC1-220ENST00000528402 TMPRSS7Q7RTY8 843 aa12.91□□□□□ -0.34
ECHDC1-220ENST00000528402 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.91□□□□□ -0.34
ECHDC1-220ENST00000528402 ZNF584Q8IVC4 421 aa12.91□□□□□ -0.34
ECHDC1-220ENST00000528402 SKA3Q8IX90 412 aa12.91□□□□□ -0.34
ECHDC1-220ENST00000528402 TUSC5Q8IXB3 177 aa12.91□□□□□ -0.34
ECHDC1-220ENST00000528402 CHST4Q8NCG5 386 aa12.91□□□□□ -0.34
ECHDC1-220ENST00000528402 CCDC107Q8WV48 283 aa12.91□□□□□ -0.34
ECHDC1-220ENST00000528402 KCNK15Q9H427 330 aa12.91□□□□□ -0.34
ECHDC1-220ENST00000528402 NKIRAS2Q9NYR9 191 aa12.91□□□□□ -0.34
ECHDC1-220ENST00000528402 CACNA1HO95180 2353 aa12.91□□□□□ -0.34
ECHDC1-220ENST00000528402 VCANP13611 3396 aa12.91□□□□□ -0.34
ECHDC1-220ENST00000528402 IGKV1-9A0A0C4DH69 117 aa12.9□□□□□ -0.34
ECHDC1-220ENST00000528402 ZNF736B4DX44 427 aaPredicted RBP12.9□□□□□ -0.34
ECHDC1-220ENST00000528402 CREBL2O60519 120 aaPredicted RBP12.9□□□□□ -0.34
ECHDC1-220ENST00000528402 CDC14BO60729 498 aa12.9□□□□□ -0.34
ECHDC1-220ENST00000528402 ARR3P36575 388 aa12.9□□□□□ -0.34
ECHDC1-220ENST00000528402 NKX2-5P52952 324 aaPredicted RBP12.9□□□□□ -0.34
ECHDC1-220ENST00000528402 GUCA2AQ02747 115 aa12.9□□□□□ -0.34
ECHDC1-220ENST00000528402 CDK10Q15131 360 aa12.9□□□□□ -0.34
ECHDC1-220ENST00000528402 PPA1Q15181 289 aa12.9□□□□□ -0.34
ECHDC1-220ENST00000528402 TGIF1Q15583 401 aa12.9□□□□□ -0.34
ECHDC1-220ENST00000528402 ST3GAL2Q16842 350 aa12.9□□□□□ -0.34
ECHDC1-220ENST00000528402 TMEM255AQ5JRV8 349 aa12.9□□□□□ -0.34
ECHDC1-220ENST00000528402 OR10K2Q6IF99 312 aa12.9□□□□□ -0.34
ECHDC1-220ENST00000528402 SPICQ8N5J4 248 aa12.9□□□□□ -0.34
ECHDC1-220ENST00000528402 ACBD4Q8NC06 268 aa12.9□□□□□ -0.34
ECHDC1-220ENST00000528402 CAPSLQ8WWF8 208 aa12.9□□□□□ -0.34
ECHDC1-220ENST00000528402 DACT3Q96B18 629 aaPredicted RBP12.9□□□□□ -0.34
ECHDC1-220ENST00000528402 POM121Q96HA1 1249 aa12.9□□□□□ -0.34
ECHDC1-220ENST00000528402 REEP6Q96HR9 211 aa12.9□□□□□ -0.34
ECHDC1-220ENST00000528402 GINS4Q9BRT9 223 aa12.9□□□□□ -0.34
ECHDC1-220ENST00000528402 SOX7Q9BT81 388 aa12.9□□□□□ -0.34
ECHDC1-220ENST00000528402 TMEM59Q9BXS4 323 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms