RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 OR52H1Q8NGJ2 320 aa13.01□□□□□ -0.33
CAPN1-213ENST00000527897 ZNF418Q8TF45 676 aaPredicted RBP13.01□□□□□ -0.33
CAPN1-213ENST00000527897 ERGIC1Q969X5 290 aa13.01□□□□□ -0.33
CAPN1-213ENST00000527897 SPSB4Q96A44 273 aa13.01□□□□□ -0.33
CAPN1-213ENST00000527897 NEIL1Q96FI4 390 aaPredicted RBP13.01□□□□□ -0.33
CAPN1-213ENST00000527897 OR8B2Q96RD0 313 aa13.01□□□□□ -0.33
CAPN1-213ENST00000527897 PRRG3Q9BZD7 231 aa13.01□□□□□ -0.33
CAPN1-213ENST00000527897 SEMA6AQ9H2E6 1030 aa13.01□□□□□ -0.33
CAPN1-213ENST00000527897 C1orf123Q9NWV4 160 aa13.01□□□□□ -0.33
CAPN1-213ENST00000527897 ZNF319Q9P2F9 582 aa13.01□□□□□ -0.33
CAPN1-213ENST00000527897 RNF7Q9UBF6 113 aa13.01□□□□□ -0.33
CAPN1-213ENST00000527897 MIOXQ9UGB7 285 aa13.01□□□□□ -0.33
CAPN1-213ENST00000527897 OPN4Q9UHM6 478 aa13.01□□□□□ -0.33
CAPN1-213ENST00000527897 LRCH1Q9Y2L9 728 aa13.01□□□□□ -0.33
CAPN1-213ENST00000527897 STAB1Q9NY15 2570 aa13□□□□□ -0.33
CAPN1-213ENST00000527897 hCG_38984A0A1B0GV85 526 aa13□□□□□ -0.33
CAPN1-213ENST00000527897 PRKYO43930 277 aa13□□□□□ -0.33
CAPN1-213ENST00000527897 SLC2A5P22732 501 aa13□□□□□ -0.33
CAPN1-213ENST00000527897 CFL1P23528 166 aaKnown RBP13□□□□□ -0.33
CAPN1-213ENST00000527897 GNALP38405 381 aa13□□□□□ -0.33
CAPN1-213ENST00000527897 DDOSTP39656 456 aa13□□□□□ -0.33
CAPN1-213ENST00000527897 GSK3AP49840 483 aa13□□□□□ -0.33
CAPN1-213ENST00000527897 ESRRGP62508 458 aa13□□□□□ -0.33
CAPN1-213ENST00000527897 MZT1Q08AG7 82 aa13□□□□□ -0.33
CAPN1-213ENST00000527897 ZNF154Q13106 437 aa13□□□□□ -0.33
CAPN1-213ENST00000527897 ARMCX4Q5H9R4 360 aa13□□□□□ -0.33
CAPN1-213ENST00000527897 LCN1P1Q5VSP4 162 aa13□□□□□ -0.33
CAPN1-213ENST00000527897 LYPD2Q6UXB3 125 aa13□□□□□ -0.33
CAPN1-213ENST00000527897 ZNF826PQ6ZT77 177 aa13□□□□□ -0.33
CAPN1-213ENST00000527897 BCDIN3DQ7Z5W3 292 aaKnown RBP13□□□□□ -0.33
CAPN1-213ENST00000527897 PARP8Q8N3A8 854 aa13□□□□□ -0.33
CAPN1-213ENST00000527897 BPIFB2Q8N4F0 458 aa13□□□□□ -0.33
CAPN1-213ENST00000527897 TCEANCQ8N8B7 351 aa13□□□□□ -0.33
CAPN1-213ENST00000527897 SPERTQ8NA61 448 aa13□□□□□ -0.33
CAPN1-213ENST00000527897 Q8TCH9 128 aa13□□□□□ -0.33
CAPN1-213ENST00000527897 TEAD3Q99594 435 aa13□□□□□ -0.33
CAPN1-213ENST00000527897 SLC6A7Q99884 636 aa13□□□□□ -0.33
CAPN1-213ENST00000527897 MRI1Q9BV20 369 aa13□□□□□ -0.33
CAPN1-213ENST00000527897 PAPOLGQ9BWT3 736 aaKnown RBP13□□□□□ -0.33
CAPN1-213ENST00000527897 C14orf119Q9NWQ9 140 aa13□□□□□ -0.33
CAPN1-213ENST00000527897 H2AFY2Q9P0M6 372 aaPredicted RBP13□□□□□ -0.33
CAPN1-213ENST00000527897 LRP12Q9Y561 859 aa13□□□□□ -0.33
CAPN1-213ENST00000527897 AUP1Q9Y679 476 aa13□□□□□ -0.33
CAPN1-213ENST00000527897 PPIAL4CA0A0B4J2A2 164 aa12.99□□□□□ -0.33
CAPN1-213ENST00000527897 CCDC182A6NF36 153 aa12.99□□□□□ -0.33
CAPN1-213ENST00000527897 VENTXO95231 258 aa12.99□□□□□ -0.33
CAPN1-213ENST00000527897 FCGR1AP12314 374 aa12.99□□□□□ -0.33
CAPN1-213ENST00000527897 EPHA2P29317 976 aa12.99□□□□□ -0.33
CAPN1-213ENST00000527897 PITPNBP48739 271 aa12.99□□□□□ -0.33
CAPN1-213ENST00000527897 RHOUQ7L0Q8 258 aa12.99□□□□□ -0.33
CAPN1-213ENST00000527897 PRSS45Q7RTY3 260 aa12.99□□□□□ -0.33
CAPN1-213ENST00000527897 COMMD2Q86X83 199 aa12.99□□□□□ -0.33
CAPN1-213ENST00000527897 TECTBQ96PL2 329 aa12.99□□□□□ -0.33
CAPN1-213ENST00000527897 IL4I1Q96RQ9 567 aa12.99□□□□□ -0.33
CAPN1-213ENST00000527897 YIPF3Q9GZM5 350 aa12.99□□□□□ -0.33
CAPN1-213ENST00000527897 PPP1R3EQ9H7J1 279 aa12.99□□□□□ -0.33
CAPN1-213ENST00000527897 CLN8Q9UBY8 286 aa12.99□□□□□ -0.33
CAPN1-213ENST00000527897 RHBDD3Q9Y3P4 386 aa12.99□□□□□ -0.33
CAPN1-213ENST00000527897 INSIG2Q9Y5U4 225 aa12.99□□□□□ -0.33
CAPN1-213ENST00000527897 SAC3D1A6NKF1 404 aa12.98□□□□□ -0.33
CAPN1-213ENST00000527897 A8MXK9 166 aa12.98□□□□□ -0.33
CAPN1-213ENST00000527897 ZNF12P17014 697 aa12.98□□□□□ -0.33
CAPN1-213ENST00000527897 ALOX5APP20292 161 aa12.98□□□□□ -0.33
CAPN1-213ENST00000527897 PSMA6P60900 246 aaKnown RBP12.98□□□□□ -0.33
CAPN1-213ENST00000527897 POU4F2Q12837 409 aa12.98□□□□□ -0.33
CAPN1-213ENST00000527897 KCTD18Q6PI47 426 aaPredicted RBP12.98□□□□□ -0.33
CAPN1-213ENST00000527897 BTNL3Q6UXE8 466 aa12.98□□□□□ -0.33
CAPN1-213ENST00000527897 DCDC5Q6ZRR9 648 aa12.98□□□□□ -0.33
CAPN1-213ENST00000527897 CCDC121Q6ZUS5 278 aa12.98□□□□□ -0.33
CAPN1-213ENST00000527897 CSNK2A3Q8NEV1 391 aa12.98□□□□□ -0.33
CAPN1-213ENST00000527897 OR8B12Q8NGG6 310 aa12.98□□□□□ -0.33
CAPN1-213ENST00000527897 FAM81AQ8TBF8 368 aa12.98□□□□□ -0.33
CAPN1-213ENST00000527897 CIB1Q99828 191 aa12.98□□□□□ -0.33
CAPN1-213ENST00000527897 IKZF2Q9UKS7 526 aa12.98□□□□□ -0.33
CAPN1-213ENST00000527897 GTF2A1LQ9UNN4 478 aa12.98□□□□□ -0.33
CAPN1-213ENST00000527897 IGHV3OR15-7A0A075B7D8 119 aa12.97□□□□□ -0.33
CAPN1-213ENST00000527897 ZAR1LA6NP61 321 aa12.97□□□□□ -0.33
CAPN1-213ENST00000527897 LGALS8O00214 317 aa12.97□□□□□ -0.33
CAPN1-213ENST00000527897 ADAM20O43506 726 aa12.97□□□□□ -0.33
CAPN1-213ENST00000527897 GYPAP02724 150 aa12.97□□□□□ -0.33
CAPN1-213ENST00000527897 GMFBP60983 142 aa12.97□□□□□ -0.33
CAPN1-213ENST00000527897 CSNK2BP67870 215 aa12.97□□□□□ -0.33
CAPN1-213ENST00000527897 KCNJ8Q15842 424 aa12.97□□□□□ -0.33
CAPN1-213ENST00000527897 SLX4IPQ5VYV7 408 aa12.97□□□□□ -0.33
CAPN1-213ENST00000527897 KDM4DQ6B0I6 523 aa12.97□□□□□ -0.33
CAPN1-213ENST00000527897 KCTD8Q6ZWB6 473 aa12.97□□□□□ -0.33
CAPN1-213ENST00000527897 MEPCEQ7L2J0 689 aaKnown RBP12.97□□□□□ -0.33
CAPN1-213ENST00000527897 FTMTQ8N4E7 242 aa12.97□□□□□ -0.33
CAPN1-213ENST00000527897 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.97□□□□□ -0.33
CAPN1-213ENST00000527897 PLPP7Q8NBV4 271 aa12.97□□□□□ -0.33
CAPN1-213ENST00000527897 PYDC1Q8WXC3 89 aa12.97□□□□□ -0.33
CAPN1-213ENST00000527897 PIGCQ92535 297 aa12.97□□□□□ -0.33
CAPN1-213ENST00000527897 LYZL4Q96KX0 146 aa12.97□□□□□ -0.33
CAPN1-213ENST00000527897 CNN2Q99439 309 aaKnown RBP12.97□□□□□ -0.33
CAPN1-213ENST00000527897 SUCNR1Q9BXA5 334 aa12.97□□□□□ -0.33
CAPN1-213ENST00000527897 MROQ9BYG7 248 aa12.97□□□□□ -0.33
CAPN1-213ENST00000527897 RIBC2Q9H4K1 309 aa12.97□□□□□ -0.33
CAPN1-213ENST00000527897 RGCCQ9H4X1 137 aa12.97□□□□□ -0.33
CAPN1-213ENST00000527897 NIPAL2Q9H841 368 aa12.97□□□□□ -0.33
CAPN1-213ENST00000527897 OAZ3Q9UMX2 235 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms