RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 CCDC22O60826 627 aa19.37■□□□□ 0.69
CPSF1-202ENST00000527827 TSPAN9O75954 239 aa19.37■□□□□ 0.69
CPSF1-202ENST00000527827 DHRS7BQ6IAN0 325 aaPredicted RBP19.37■□□□□ 0.69
CPSF1-202ENST00000527827 METAP1DQ6UB28 335 aaPredicted RBP19.37■□□□□ 0.69
CPSF1-202ENST00000527827 PROKR2Q8NFJ6 384 aa19.37■□□□□ 0.69
CPSF1-202ENST00000527827 FAM110DQ8TAY7 271 aaPredicted RBP19.37■□□□□ 0.69
CPSF1-202ENST00000527827 COPS4Q9BT78 406 aa19.37■□□□□ 0.69
CPSF1-202ENST00000527827 ONECUT1Q9UBC0 465 aa19.37■□□□□ 0.69
CPSF1-202ENST00000527827 VPREB3Q9UKI3 123 aa19.37■□□□□ 0.69
CPSF1-202ENST00000527827 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP19.36■□□□□ 0.69
CPSF1-202ENST00000527827 PRB3Q04118 309 aaPredicted RBP19.36■□□□□ 0.69
CPSF1-202ENST00000527827 TSPAN31Q12999 210 aa19.36■□□□□ 0.69
CPSF1-202ENST00000527827 WDR38Q5JTN6 314 aa19.36■□□□□ 0.69
CPSF1-202ENST00000527827 ZDHHC21Q8IVQ6 265 aa19.36■□□□□ 0.69
CPSF1-202ENST00000527827 RNF148Q8N7C7 305 aa19.36■□□□□ 0.69
CPSF1-202ENST00000527827 OR51L1Q8NGJ5 315 aa19.36■□□□□ 0.69
CPSF1-202ENST00000527827 LRRC29Q8WV35 223 aa19.36■□□□□ 0.69
CPSF1-202ENST00000527827 SPSB4Q96A44 273 aa19.36■□□□□ 0.69
CPSF1-202ENST00000527827 PYURFQ96I23 114 aa19.36■□□□□ 0.69
CPSF1-202ENST00000527827 KCNJ15Q99712 375 aa19.36■□□□□ 0.69
CPSF1-202ENST00000527827 OPA3Q9H6K4 179 aa19.36■□□□□ 0.69
CPSF1-202ENST00000527827 EGLN3Q9H6Z9 239 aa19.36■□□□□ 0.69
CPSF1-202ENST00000527827 GORASP2Q9H8Y8 452 aa19.36■□□□□ 0.69
CPSF1-202ENST00000527827 RNPEPL1Q9HAU8 725 aa19.36■□□□□ 0.69
CPSF1-202ENST00000527827 SIRT7Q9NRC8 400 aa19.36■□□□□ 0.69
CPSF1-202ENST00000527827 N6AMT1Q9Y5N5 214 aa19.36■□□□□ 0.69
CPSF1-202ENST00000527827 COMMD3-BMI1R4GMX3 469 aa19.36■□□□□ 0.69
CPSF1-202ENST00000527827 TET2Q6N021 2002 aaPredicted RBP19.35■□□□□ 0.69
CPSF1-202ENST00000527827 ZNF816-ZNF321PA0A0X1KG74 233 aa19.35■□□□□ 0.69
CPSF1-202ENST00000527827 XRCC2O43543 280 aa19.35■□□□□ 0.69
CPSF1-202ENST00000527827 FBP1P09467 338 aa19.35■□□□□ 0.69
CPSF1-202ENST00000527827 MUC1P15941 1255 aaPredicted RBP19.35■□□□□ 0.69
CPSF1-202ENST00000527827 MICBQ29980 383 aa19.35■□□□□ 0.69
CPSF1-202ENST00000527827 PGBD2Q6P3X8 592 aa19.35■□□□□ 0.69
CPSF1-202ENST00000527827 FAM216BQ8N7L0 139 aa19.35■□□□□ 0.69
CPSF1-202ENST00000527827 OR4C15Q8NGM1 316 aa19.35■□□□□ 0.69
CPSF1-202ENST00000527827 OR2T4Q8NH00 348 aa19.35■□□□□ 0.69
CPSF1-202ENST00000527827 GNPDA2Q8TDQ7 276 aa19.35■□□□□ 0.69
CPSF1-202ENST00000527827 NPRL2Q8WTW4 380 aa19.35■□□□□ 0.69
CPSF1-202ENST00000527827 SLAMF6Q96DU3 332 aa19.35■□□□□ 0.69
CPSF1-202ENST00000527827 SEH1LQ96EE3 360 aa19.35■□□□□ 0.69
CPSF1-202ENST00000527827 CCDC134Q9H6E4 229 aa19.35■□□□□ 0.69
CPSF1-202ENST00000527827 SPAG4Q9NPE6 437 aa19.35■□□□□ 0.69
CPSF1-202ENST00000527827 ARGLU1Q9NWB6 273 aaPredicted RBP19.35■□□□□ 0.69
CPSF1-202ENST00000527827 RNASEK-C17orf49H0YIS7 233 aa19.34■□□□□ 0.69
CPSF1-202ENST00000527827 AMY2BP19961 511 aa19.34■□□□□ 0.69
CPSF1-202ENST00000527827 RRM2P31350 389 aa19.34■□□□□ 0.69
CPSF1-202ENST00000527827 GRK5P34947 590 aa19.34■□□□□ 0.69
CPSF1-202ENST00000527827 IFNGR2P38484 337 aa19.34■□□□□ 0.69
CPSF1-202ENST00000527827 DDOSTP39656 456 aa19.34■□□□□ 0.69
CPSF1-202ENST00000527827 DLX1P56177 255 aa19.34■□□□□ 0.69
CPSF1-202ENST00000527827 CSNK2BP67870 215 aa19.34■□□□□ 0.69
CPSF1-202ENST00000527827 C2orf68Q2NKX9 166 aa19.34■□□□□ 0.69
CPSF1-202ENST00000527827 WDR82Q6UXN9 313 aa19.34■□□□□ 0.69
CPSF1-202ENST00000527827 Q8N7P7 452 aa19.34■□□□□ 0.69
CPSF1-202ENST00000527827 OR1M1Q8NGA1 313 aa19.34■□□□□ 0.69
CPSF1-202ENST00000527827 OR8S1Q8NH09 359 aa19.34■□□□□ 0.69
CPSF1-202ENST00000527827 DMRTB1Q96MA1 342 aa19.34■□□□□ 0.69
CPSF1-202ENST00000527827 PPP1R3EQ9H7J1 279 aa19.34■□□□□ 0.69
CPSF1-202ENST00000527827 CENPMQ9NSP4 180 aa19.34■□□□□ 0.69
CPSF1-202ENST00000527827 CAB39Q9Y376 341 aaPredicted RBP19.34■□□□□ 0.69
CPSF1-202ENST00000527827 ANKRD30BLA7E2S9 258 aa19.33■□□□□ 0.68
CPSF1-202ENST00000527827 ACOT8O14734 319 aa19.33■□□□□ 0.68
CPSF1-202ENST00000527827 SPARCP09486 303 aa19.33■□□□□ 0.68
CPSF1-202ENST00000527827 FAM3AP98173 230 aa19.33■□□□□ 0.68
CPSF1-202ENST00000527827 EGR3Q06889 387 aa19.33■□□□□ 0.68
CPSF1-202ENST00000527827 SLC16A9Q7RTY1 509 aa19.33■□□□□ 0.68
CPSF1-202ENST00000527827 SLC36A1Q7Z2H8 476 aa19.33■□□□□ 0.68
CPSF1-202ENST00000527827 DPY19L4Q7Z388 723 aa19.33■□□□□ 0.68
CPSF1-202ENST00000527827 OR9Q1Q8NGQ5 310 aa19.33■□□□□ 0.68
CPSF1-202ENST00000527827 PRPF19Q9UMS4 504 aaKnown RBP19.33■□□□□ 0.68
CPSF1-202ENST00000527827 CDH10Q9Y6N8 788 aa19.33■□□□□ 0.68
CPSF1-202ENST00000527827 A0A1W2PRD5 423 aa19.32■□□□□ 0.68
CPSF1-202ENST00000527827 A0A1W2PRF3 423 aa19.32■□□□□ 0.68
CPSF1-202ENST00000527827 A0A1W2PRM7 423 aa19.32■□□□□ 0.68
CPSF1-202ENST00000527827 BTBD17A6NE02 478 aa19.32■□□□□ 0.68
CPSF1-202ENST00000527827 NPFFO15130 113 aa19.32■□□□□ 0.68
CPSF1-202ENST00000527827 GMNNO75496 209 aa19.32■□□□□ 0.68
CPSF1-202ENST00000527827 TGFBR2P37173 567 aa19.32■□□□□ 0.68
CPSF1-202ENST00000527827 TGM4P49221 684 aa19.32■□□□□ 0.68
CPSF1-202ENST00000527827 ENTPD1P49961 510 aa19.32■□□□□ 0.68
CPSF1-202ENST00000527827 GUCA2AQ02747 115 aa19.32■□□□□ 0.68
CPSF1-202ENST00000527827 KLRD1Q13241 179 aa19.32■□□□□ 0.68
CPSF1-202ENST00000527827 TAF13Q15543 124 aa19.32■□□□□ 0.68
CPSF1-202ENST00000527827 CMTM4Q8IZR5 234 aa19.32■□□□□ 0.68
CPSF1-202ENST00000527827 ZNF511Q8NB15 262 aa19.32■□□□□ 0.68
CPSF1-202ENST00000527827 SLC37A3Q8NCC5 494 aa19.32■□□□□ 0.68
CPSF1-202ENST00000527827 TNFRSF14Q92956 283 aa19.32■□□□□ 0.68
CPSF1-202ENST00000527827 DCTN5Q9BTE1 182 aa19.32■□□□□ 0.68
CPSF1-202ENST00000527827 DNAJB11Q9UBS4 358 aa19.32■□□□□ 0.68
CPSF1-202ENST00000527827 CD300AQ9UGN4 299 aa19.32■□□□□ 0.68
CPSF1-202ENST00000527827 ZNF878C9JN71 531 aa19.31■□□□□ 0.68
CPSF1-202ENST00000527827 TBX1O43435 398 aa19.31■□□□□ 0.68
CPSF1-202ENST00000527827 SELLP14151 372 aa19.31■□□□□ 0.68
CPSF1-202ENST00000527827 EEF1B2P24534 225 aaKnown RBP19.31■□□□□ 0.68
CPSF1-202ENST00000527827 IKZF1Q13422 519 aa19.31■□□□□ 0.68
CPSF1-202ENST00000527827 TEX30Q5JUR7 227 aa19.31■□□□□ 0.68
CPSF1-202ENST00000527827 STUMQ69YW2 141 aa19.31■□□□□ 0.68
CPSF1-202ENST00000527827 PNKDQ8N490 385 aa19.31■□□□□ 0.68
CPSF1-202ENST00000527827 OR52L1Q8NGH7 329 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms