RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 MGMTP16455 207 aa13.38□□□□□ -0.27
USP47-207ENST00000527733 GLRA1P23415 457 aa13.38□□□□□ -0.27
USP47-207ENST00000527733 CCR6P51684 374 aa13.38□□□□□ -0.27
USP47-207ENST00000527733 DMKNQ6E0U4 476 aaPredicted RBP13.38□□□□□ -0.27
USP47-207ENST00000527733 FJX1Q86VR8 437 aa13.38□□□□□ -0.27
USP47-207ENST00000527733 CCDC71Q8IV32 467 aaPredicted RBP13.38□□□□□ -0.27
USP47-207ENST00000527733 CISD2Q8N5K1 135 aaKnown RBP13.38□□□□□ -0.27
USP47-207ENST00000527733 RDH5Q92781 318 aa13.38□□□□□ -0.27
USP47-207ENST00000527733 THADAQ6YHU6 1953 aa13.38□□□□□ -0.27
USP47-207ENST00000527733 C1orf87Q8N0U7 546 aa13.38□□□□□ -0.27
USP47-207ENST00000527733 ELMOD3Q96FG2 381 aa13.38□□□□□ -0.27
USP47-207ENST00000527733 PLK3Q9H4B4 646 aa13.38□□□□□ -0.27
USP47-207ENST00000527733 KIR2DL3P43628 341 aa13.38□□□□□ -0.27
USP47-207ENST00000527733 ZNF83P51522 516 aa13.38□□□□□ -0.27
USP47-207ENST00000527733 AADACL3Q5VUY0 350 aa13.38□□□□□ -0.27
USP47-207ENST00000527733 ARHGEF39Q8N4T4 335 aa13.38□□□□□ -0.27
USP47-207ENST00000527733 SLC7A6Q92536 515 aa13.38□□□□□ -0.27
USP47-207ENST00000527733 SLIRPQ9GZT3 109 aaKnown RBP13.38□□□□□ -0.27
USP47-207ENST00000527733 IGLV3-12A0A075B6K2 115 aa13.37□□□□□ -0.27
USP47-207ENST00000527733 MASP2O00187 686 aa13.37□□□□□ -0.27
USP47-207ENST00000527733 ECI1P42126 302 aa13.37□□□□□ -0.27
USP47-207ENST00000527733 SRP9P49458 86 aaKnown RBP13.37□□□□□ -0.27
USP47-207ENST00000527733 OR2AE1Q8NHA4 323 aa13.37□□□□□ -0.27
USP47-207ENST00000527733 H1FXQ92522 213 aaKnown RBP13.37□□□□□ -0.27
USP47-207ENST00000527733 TIMD4Q96H15 378 aa13.37□□□□□ -0.27
USP47-207ENST00000527733 hCG_1809904A0A1W2PP81 198 aa13.37□□□□□ -0.27
USP47-207ENST00000527733 A0A1W2PPE2 198 aa13.37□□□□□ -0.27
USP47-207ENST00000527733 A0A1W2PR64 198 aa13.37□□□□□ -0.27
USP47-207ENST00000527733 A0A1W2PRV1 198 aa13.37□□□□□ -0.27
USP47-207ENST00000527733 RAP2BP61225 183 aa13.37□□□□□ -0.27
USP47-207ENST00000527733 ASAH1Q13510 395 aa13.37□□□□□ -0.27
USP47-207ENST00000527733 PLGLAQ15195 96 aa13.37□□□□□ -0.27
USP47-207ENST00000527733 OR56B2PQ8NGI1 322 aa13.37□□□□□ -0.27
USP47-207ENST00000527733 OR51S1Q8NGJ8 323 aa13.37□□□□□ -0.27
USP47-207ENST00000527733 DCUN1D4Q92564 292 aa13.37□□□□□ -0.27
USP47-207ENST00000527733 ZNF385AQ96PM9 386 aaKnown RBP13.37□□□□□ -0.27
USP47-207ENST00000527733 DPCDQ9BVM2 203 aaPredicted RBP13.37□□□□□ -0.27
USP47-207ENST00000527733 ST3GAL6Q9Y274 331 aa13.37□□□□□ -0.27
USP47-207ENST00000527733 A0A1B0GVG6 124 aa13.37□□□□□ -0.27
USP47-207ENST00000527733 RGS11O94810 467 aa13.37□□□□□ -0.27
USP47-207ENST00000527733 CTXN2P0C2S0 81 aa13.37□□□□□ -0.27
USP47-207ENST00000527733 NKX2-5P52952 324 aaPredicted RBP13.37□□□□□ -0.27
USP47-207ENST00000527733 MRPL14Q6P1L8 145 aaKnown RBP13.37□□□□□ -0.27
USP47-207ENST00000527733 ZNF275Q9NSD4 429 aaPredicted RBP13.37□□□□□ -0.27
USP47-207ENST00000527733 MRPS18AQ9NVS2 196 aaKnown RBP13.37□□□□□ -0.27
USP47-207ENST00000527733 TAS2R5Q9NYW4 299 aa13.37□□□□□ -0.27
USP47-207ENST00000527733 SMCO3A2RU48 225 aa13.36□□□□□ -0.27
USP47-207ENST00000527733 OGG1O15527 345 aa13.36□□□□□ -0.27
USP47-207ENST00000527733 CST2P09228 141 aa13.36□□□□□ -0.27
USP47-207ENST00000527733 MPGP29372 298 aa13.36□□□□□ -0.27
USP47-207ENST00000527733 GNG3P63215 75 aa13.36□□□□□ -0.27
USP47-207ENST00000527733 CFHR1Q03591 330 aa13.36□□□□□ -0.27
USP47-207ENST00000527733 ZFP36L1Q07352 338 aaKnown RBP13.36□□□□□ -0.27
USP47-207ENST00000527733 INSL4Q14641 139 aa13.36□□□□□ -0.27
USP47-207ENST00000527733 FRMPD3Q5JV73 1810 aa13.36□□□□□ -0.27
USP47-207ENST00000527733 NUFIP2Q7Z417 695 aaKnown RBP13.36□□□□□ -0.27
USP47-207ENST00000527733 ADPRHL1Q8NDY3 354 aa13.36□□□□□ -0.27
USP47-207ENST00000527733 MFFQ9GZY8 342 aa13.36□□□□□ -0.27
USP47-207ENST00000527733 GPR35Q9HC97 309 aa13.36□□□□□ -0.27
USP47-207ENST00000527733 RDH8Q9NYR8 311 aa13.36□□□□□ -0.27
USP47-207ENST00000527733 UBQLN2Q9UHD9 624 aa13.36□□□□□ -0.27
USP47-207ENST00000527733 MSMO1Q15800 293 aa13.36□□□□□ -0.27
USP47-207ENST00000527733 SLC16A12Q6ZSM3 486 aa13.36□□□□□ -0.27
USP47-207ENST00000527733 NOXA1Q86UR1 476 aa13.36□□□□□ -0.27
USP47-207ENST00000527733 OSR2Q8N2R0 312 aa13.36□□□□□ -0.27
USP47-207ENST00000527733 ZBTB8BQ8NAP8 495 aaPredicted RBP13.36□□□□□ -0.27
USP47-207ENST00000527733 DEFB108BQ8NET1 73 aa13.36□□□□□ -0.27
USP47-207ENST00000527733 TMEM185AQ8NFB2 350 aa13.36□□□□□ -0.27
USP47-207ENST00000527733 GPX7Q96SL4 187 aaPredicted RBP13.36□□□□□ -0.27
USP47-207ENST00000527733 DOCK8Q8NF50 2099 aa13.36□□□□□ -0.27
USP47-207ENST00000527733 GSTP1P09211 210 aaKnown RBP13.36□□□□□ -0.27
USP47-207ENST00000527733 MRPS34P82930 218 aaKnown RBP13.36□□□□□ -0.27
USP47-207ENST00000527733 OR2T2Q6IF00 324 aa13.36□□□□□ -0.27
USP47-207ENST00000527733 SLC26A10Q8NG04 563 aa13.36□□□□□ -0.27
USP47-207ENST00000527733 NUDCD2Q8WVJ2 157 aa13.36□□□□□ -0.27
USP47-207ENST00000527733 UQCC2Q9BRT2 126 aa13.36□□□□□ -0.27
USP47-207ENST00000527733 PPIL3Q9H2H8 161 aaKnown RBP13.36□□□□□ -0.27
USP47-207ENST00000527733 NDUFB7P17568 137 aa13.36□□□□□ -0.27
USP47-207ENST00000527733 OR10R2Q8NGX6 335 aa13.36□□□□□ -0.27
USP47-207ENST00000527733 SULT1C2O00338 296 aa13.35□□□□□ -0.27
USP47-207ENST00000527733 ANGPTL7O43827 346 aa13.35□□□□□ -0.27
USP47-207ENST00000527733 TXNDC12O95881 172 aa13.35□□□□□ -0.27
USP47-207ENST00000527733 ALDOBP05062 364 aa13.35□□□□□ -0.27
USP47-207ENST00000527733 GLAP06280 429 aa13.35□□□□□ -0.27
USP47-207ENST00000527733 ACSM4P0C7M7 580 aa13.35□□□□□ -0.27
USP47-207ENST00000527733 CSRP1P21291 193 aaKnown RBP13.35□□□□□ -0.27
USP47-207ENST00000527733 PTGER4P35408 488 aa13.35□□□□□ -0.27
USP47-207ENST00000527733 NPY4RP50391 375 aa13.35□□□□□ -0.27
USP47-207ENST00000527733 CDCP2Q5VXM1 449 aa13.35□□□□□ -0.27
USP47-207ENST00000527733 NUP50Q9UKX7 468 aa13.35□□□□□ -0.27
USP47-207ENST00000527733 EFSO43281 561 aa13.35□□□□□ -0.27
USP47-207ENST00000527733 XRCC3O43542 346 aa13.35□□□□□ -0.27
USP47-207ENST00000527733 IGF2P01344 180 aa13.35□□□□□ -0.27
USP47-207ENST00000527733 SNRPD2P62316 118 aaKnown RBP13.35□□□□□ -0.27
USP47-207ENST00000527733 SRPXP78539 464 aa13.35□□□□□ -0.27
USP47-207ENST00000527733 KISS1Q15726 138 aa13.35□□□□□ -0.27
USP47-207ENST00000527733 ATP1A1-AS1Q5TC04 95 aa13.35□□□□□ -0.27
USP47-207ENST00000527733 MRPL41Q8IXM3 137 aaKnown RBP13.35□□□□□ -0.27
USP47-207ENST00000527733 GABRG1Q8N1C3 465 aa13.35□□□□□ -0.27
USP47-207ENST00000527733 CELF2-AS1Q8N7Q2 184 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms