RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 RPL36Q9Y3U8 105 aaKnown RBP9.24□□□□□ -0.93
NEDD8-204ENST00000526430 LRRC42Q9Y546 428 aa9.24□□□□□ -0.93
NEDD8-204ENST00000526430 LOC105371242A0A075B767 164 aa9.23□□□□□ -0.93
NEDD8-204ENST00000526430 ZNF670-ZNF695F2Z2N8 137 aa9.23□□□□□ -0.93
NEDD8-204ENST00000526430 M0R135 149 aa9.23□□□□□ -0.93
NEDD8-204ENST00000526430 SLC1A7O00341 560 aa9.23□□□□□ -0.93
NEDD8-204ENST00000526430 FAM20BO75063 409 aa9.23□□□□□ -0.93
NEDD8-204ENST00000526430 IGLV3-1P01715 115 aa9.23□□□□□ -0.93
NEDD8-204ENST00000526430 HTR1AP08908 422 aa9.23□□□□□ -0.93
NEDD8-204ENST00000526430 OR4A8P0C604 315 aa9.23□□□□□ -0.93
NEDD8-204ENST00000526430 PIPP12273 146 aaPredicted RBP9.23□□□□□ -0.93
NEDD8-204ENST00000526430 C21orf33P30042 268 aaPredicted RBP9.23□□□□□ -0.93
NEDD8-204ENST00000526430 DCTDP32321 178 aa9.23□□□□□ -0.93
NEDD8-204ENST00000526430 RAD52P43351 418 aa9.23□□□□□ -0.93
NEDD8-204ENST00000526430 HSPA13P48723 471 aa9.23□□□□□ -0.93
NEDD8-204ENST00000526430 ETV1P50549 477 aa9.23□□□□□ -0.93
NEDD8-204ENST00000526430 PRSS12P56730 875 aa9.23□□□□□ -0.93
NEDD8-204ENST00000526430 OR12D2P58182 307 aa9.23□□□□□ -0.93
NEDD8-204ENST00000526430 PPP1CBP62140 327 aa9.23□□□□□ -0.93
NEDD8-204ENST00000526430 EGR3Q06889 387 aa9.23□□□□□ -0.93
NEDD8-204ENST00000526430 MFGE8Q08431 387 aaPredicted RBP9.23□□□□□ -0.93
NEDD8-204ENST00000526430 PSG7Q13046 419 aa9.23□□□□□ -0.93
NEDD8-204ENST00000526430 HLXQ14774 488 aaPredicted RBP9.23□□□□□ -0.93
NEDD8-204ENST00000526430 CDONQ4KMG0 1287 aa9.23□□□□□ -0.93
NEDD8-204ENST00000526430 MBNL2Q5VZF2 373 aaKnown RBP9.23□□□□□ -0.93
NEDD8-204ENST00000526430 VHLLQ6RSH7 139 aa9.23□□□□□ -0.93
NEDD8-204ENST00000526430 DRAM2Q6UX65 266 aa9.23□□□□□ -0.93
NEDD8-204ENST00000526430 LHFPL3Q86UP9 236 aa9.23□□□□□ -0.93
NEDD8-204ENST00000526430 ACBD7Q8N6N7 88 aa9.23□□□□□ -0.93
NEDD8-204ENST00000526430 BPIFB6Q8NFQ5 453 aa9.23□□□□□ -0.93
NEDD8-204ENST00000526430 OR10H4Q8NGA5 316 aa9.23□□□□□ -0.93
NEDD8-204ENST00000526430 OR1J1Q8NGS3 322 aa9.23□□□□□ -0.93
NEDD8-204ENST00000526430 KLF14Q8TD94 323 aaPredicted RBP9.23□□□□□ -0.93
NEDD8-204ENST00000526430 ASB17Q8WXJ9 295 aa9.23□□□□□ -0.93
NEDD8-204ENST00000526430 RORBQ92753 470 aa9.23□□□□□ -0.93
NEDD8-204ENST00000526430 ZNF799Q96GE5 643 aa9.23□□□□□ -0.93
NEDD8-204ENST00000526430 LYZL4Q96KX0 146 aa9.23□□□□□ -0.93
NEDD8-204ENST00000526430 BCL2L14Q9BZR8 327 aa9.23□□□□□ -0.93
NEDD8-204ENST00000526430 ISG20L2Q9H9L3 353 aaKnown RBP9.23□□□□□ -0.93
NEDD8-204ENST00000526430 FAM206AQ9NX38 181 aa9.23□□□□□ -0.93
NEDD8-204ENST00000526430 ERVK13-1Q9NX77 482 aa9.23□□□□□ -0.93
NEDD8-204ENST00000526430 FZR1Q9UM11 496 aa9.23□□□□□ -0.93
NEDD8-204ENST00000526430 DIMT1Q9UNQ2 313 aaKnown RBP9.23□□□□□ -0.93
NEDD8-204ENST00000526430 TMEM14AQ9Y6G1 99 aa9.23□□□□□ -0.93
NEDD8-204ENST00000526430 ARHGAP32A7KAX9 2087 aa9.23□□□□□ -0.93
NEDD8-204ENST00000526430 E9PI62 339 aa9.22□□□□□ -0.93
NEDD8-204ENST00000526430 ZNF254O75437 659 aa9.22□□□□□ -0.93
NEDD8-204ENST00000526430 SULT1C4O75897 302 aa9.22□□□□□ -0.93
NEDD8-204ENST00000526430 AVPP01185 164 aa9.22□□□□□ -0.93
NEDD8-204ENST00000526430 IGHV3-13P01766 116 aa9.22□□□□□ -0.93
NEDD8-204ENST00000526430 H2BFMP0C1H6 154 aa9.22□□□□□ -0.93
NEDD8-204ENST00000526430 PRTN3P24158 256 aa9.22□□□□□ -0.93
NEDD8-204ENST00000526430 CRHBPP24387 322 aa9.22□□□□□ -0.93
NEDD8-204ENST00000526430 CX3CR1P49238 355 aa9.22□□□□□ -0.93
NEDD8-204ENST00000526430 MMP16P51512 607 aa9.22□□□□□ -0.93
NEDD8-204ENST00000526430 TPTEP56180 551 aa9.22□□□□□ -0.93
NEDD8-204ENST00000526430 ZNF121P58317 390 aaPredicted RBP9.22□□□□□ -0.93
NEDD8-204ENST00000526430 GRB2P62993 217 aaKnown RBP9.22□□□□□ -0.93
NEDD8-204ENST00000526430 SLC35A2P78381 396 aa9.22□□□□□ -0.93
NEDD8-204ENST00000526430 ZNF92Q03936 586 aa9.22□□□□□ -0.93
NEDD8-204ENST00000526430 ST3GAL4Q11206 333 aa9.22□□□□□ -0.93
NEDD8-204ENST00000526430 GALEQ14376 348 aa9.22□□□□□ -0.93
NEDD8-204ENST00000526430 GK2Q14410 553 aaPredicted RBP9.22□□□□□ -0.93
NEDD8-204ENST00000526430 IRF3Q14653 427 aa9.22□□□□□ -0.93
NEDD8-204ENST00000526430 TP53I3Q53FA7 332 aa9.22□□□□□ -0.93
NEDD8-204ENST00000526430 KLHL22Q53GT1 634 aa9.22□□□□□ -0.93
NEDD8-204ENST00000526430 GLYATL3Q5SZD4 288 aa9.22□□□□□ -0.93
NEDD8-204ENST00000526430 SPATA46Q5T0L3 261 aa9.22□□□□□ -0.93
NEDD8-204ENST00000526430 FAHD2BQ6P2I3 314 aaPredicted RBP9.22□□□□□ -0.93
NEDD8-204ENST00000526430 KCTD18Q6PI47 426 aaPredicted RBP9.22□□□□□ -0.93
NEDD8-204ENST00000526430 FBXW12Q6X9E4 464 aa9.22□□□□□ -0.93
NEDD8-204ENST00000526430 CLDND2Q8NHS1 167 aa9.22□□□□□ -0.93
NEDD8-204ENST00000526430 ABHD4Q8TB40 342 aa9.22□□□□□ -0.93
NEDD8-204ENST00000526430 UBASH3BQ8TF42 649 aa9.22□□□□□ -0.93
NEDD8-204ENST00000526430 GTF3AQ92664 365 aaKnown RBP9.22□□□□□ -0.93
NEDD8-204ENST00000526430 SPSB4Q96A44 273 aa9.22□□□□□ -0.93
NEDD8-204ENST00000526430 APOBEC3DQ96AK3 386 aaPredicted RBP9.22□□□□□ -0.93
NEDD8-204ENST00000526430 HAVCR1Q96D42 359 aa9.22□□□□□ -0.93
NEDD8-204ENST00000526430 FAHD2AQ96GK7 314 aa9.22□□□□□ -0.93
NEDD8-204ENST00000526430 CNBD2Q96M20 576 aa9.22□□□□□ -0.93
NEDD8-204ENST00000526430 COPS4Q9BT78 406 aa9.22□□□□□ -0.93
NEDD8-204ENST00000526430 PPIAL4AQ9Y536 164 aa9.22□□□□□ -0.93
NEDD8-204ENST00000526430 COL7A1Q02388 2944 aa9.21□□□□□ -0.93
NEDD8-204ENST00000526430 A0A1B0GTI1 187 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 A0A1B0GWJ7 208 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 DAPL1A0PJW8 107 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 METTL15A6NJ78 407 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 SNTNA6NMZ2 147 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 J3QW42 95 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 PHYHO14832 338 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 FADS2O95864 444 aaKnown RBP9.21□□□□□ -0.94
NEDD8-204ENST00000526430 LALBAP00709 142 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 TTRP02766 147 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 LCATP04180 440 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 LCKP06239 509 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 CCDC159P0C7I6 412 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 DCKP27707 260 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 ATP6V1E1P36543 226 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 RBMXP38159 391 aaKnown RBP9.21□□□□□ -0.94
NEDD8-204ENST00000526430 KIR3DL2P43630 455 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms