RNA–Protein interactions for RNA: ENST00000525396.5

CHEK1-207, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-207ENST00000525396 RAB1CQ92928 201 aa13.17□□□□□ -0.3
CHEK1-207ENST00000525396 RDH12Q96NR8 316 aa13.17□□□□□ -0.3
CHEK1-207ENST00000525396 PBOV1Q9GZY1 135 aa13.17□□□□□ -0.3
CHEK1-207ENST00000525396 SLC22A4Q9H015 551 aa13.17□□□□□ -0.3
CHEK1-207ENST00000525396 NUFIP1Q9UHK0 495 aaKnown RBP13.17□□□□□ -0.3
CHEK1-207ENST00000525396 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.17□□□□□ -0.3
CHEK1-207ENST00000525396 NPTNQ9Y639 398 aa13.17□□□□□ -0.3
CHEK1-207ENST00000525396 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.17□□□□□ -0.31e-6■■■■□ 19.4
CHEK1-207ENST00000525396 SETD2Q9BYW2 2564 aaPredicted RBP13.16□□□□□ -0.3
CHEK1-207ENST00000525396 A0A0U1RQV5 110 aa13.16□□□□□ -0.3
CHEK1-207ENST00000525396 LOC100289279A0A1B0GTE1 492 aa13.16□□□□□ -0.3
CHEK1-207ENST00000525396 ISPDA4D126 451 aa13.16□□□□□ -0.3
CHEK1-207ENST00000525396 A8MV72 311 aaPredicted RBP13.16□□□□□ -0.3
CHEK1-207ENST00000525396 TMEM178BH3BS89 294 aa13.16□□□□□ -0.3
CHEK1-207ENST00000525396 CASQ2O14958 399 aaPredicted RBP13.16□□□□□ -0.3
CHEK1-207ENST00000525396 GMDSO60547 372 aa13.16□□□□□ -0.3
CHEK1-207ENST00000525396 PTBP3O95758 552 aaKnown RBP13.16□□□□□ -0.3
CHEK1-207ENST00000525396 CYB5R3P00387 301 aaPredicted RBP13.16□□□□□ -0.3
CHEK1-207ENST00000525396 IGLV3-1P01715 115 aa13.16□□□□□ -0.3
CHEK1-207ENST00000525396 IGHV2-5P01817 119 aa13.16□□□□□ -0.3
CHEK1-207ENST00000525396 TTRP02766 147 aa13.16□□□□□ -0.3
CHEK1-207ENST00000525396 OR2T7P0C7T2 308 aa13.16□□□□□ -0.3
CHEK1-207ENST00000525396 DDOSTP39656 456 aa13.16□□□□□ -0.3
CHEK1-207ENST00000525396 ZNF85Q03923 595 aa13.16□□□□□ -0.3
CHEK1-207ENST00000525396 ZNF91Q05481 1191 aa13.16□□□□□ -0.3
CHEK1-207ENST00000525396 MPPED2Q15777 294 aa13.16□□□□□ -0.3
CHEK1-207ENST00000525396 OGFRL1Q5TC84 451 aaPredicted RBP13.16□□□□□ -0.3
CHEK1-207ENST00000525396 MEDAGQ5VYS4 303 aa13.16□□□□□ -0.3
CHEK1-207ENST00000525396 FAM166AQ6J272 317 aa13.16□□□□□ -0.3
CHEK1-207ENST00000525396 OR2T27Q8NH04 317 aa13.16□□□□□ -0.3
CHEK1-207ENST00000525396 RHOXF1Q8NHV9 184 aa13.16□□□□□ -0.3
CHEK1-207ENST00000525396 APH1BQ8WW43 257 aa13.16□□□□□ -0.3
CHEK1-207ENST00000525396 PPP1R14AQ96A00 147 aa13.16□□□□□ -0.3
CHEK1-207ENST00000525396 RNFT2Q96EX2 444 aa13.16□□□□□ -0.3
CHEK1-207ENST00000525396 POM121Q96HA1 1249 aa13.16□□□□□ -0.3
CHEK1-207ENST00000525396 ZNF665Q9H7R5 613 aa13.16□□□□□ -0.3
CHEK1-207ENST00000525396 G6PC2Q9NQR9 355 aa13.16□□□□□ -0.3
CHEK1-207ENST00000525396 NOP16Q9Y3C1 178 aaKnown RBP13.16□□□□□ -0.3
CHEK1-207ENST00000525396 RHBDD3Q9Y3P4 386 aa13.16□□□□□ -0.3
CHEK1-207ENST00000525396 R4GMQ9 66 aa13.16□□□□□ -0.3
CHEK1-207ENST00000525396 HIVEP2P31629 2446 aa13.15□□□□□ -0.3
CHEK1-207ENST00000525396 NIPBLQ6KC79 2804 aaeCLIP13.15□□□□□ -0.3
CHEK1-207ENST00000525396 ACOD1A6NK06 481 aa13.15□□□□□ -0.3
CHEK1-207ENST00000525396 ANKRD30BLA7E2S9 258 aa13.15□□□□□ -0.3
CHEK1-207ENST00000525396 LOC110117498-PIK3R3F6TDL0 507 aa13.15□□□□□ -0.3
CHEK1-207ENST00000525396 J3QRE1 110 aa13.15□□□□□ -0.3
CHEK1-207ENST00000525396 FAM20BO75063 409 aa13.15□□□□□ -0.3
CHEK1-207ENST00000525396 CLIC3O95833 236 aa13.15□□□□□ -0.3
CHEK1-207ENST00000525396 DBTP11182 482 aaKnown RBP13.15□□□□□ -0.3
CHEK1-207ENST00000525396 ATP6V1E1P36543 226 aa13.15□□□□□ -0.3
CHEK1-207ENST00000525396 BTG1P62324 171 aa13.15□□□□□ -0.3
CHEK1-207ENST00000525396 HOXA4Q00056 320 aaPredicted RBP13.15□□□□□ -0.3
CHEK1-207ENST00000525396 ZMYND11Q15326 602 aa13.15□□□□□ -0.3
CHEK1-207ENST00000525396 WDR86Q86TI4 376 aa13.15□□□□□ -0.3
CHEK1-207ENST00000525396 PACRGLQ8N7B6 248 aa13.15□□□□□ -0.3
CHEK1-207ENST00000525396 LINC01356Q8N9X3 169 aa13.15□□□□□ -0.3
CHEK1-207ENST00000525396 OR51E1Q8TCB6 317 aa13.15□□□□□ -0.3
CHEK1-207ENST00000525396 GAL3ST1Q99999 423 aa13.15□□□□□ -0.3
CHEK1-207ENST00000525396 PAPOLGQ9BWT3 736 aaKnown RBP13.15□□□□□ -0.3
CHEK1-207ENST00000525396 MOB1AQ9H8S9 216 aa13.15□□□□□ -0.3
CHEK1-207ENST00000525396 LPAR2Q9HBW0 351 aa13.15□□□□□ -0.3
CHEK1-207ENST00000525396 UFSP2Q9NUQ7 469 aa13.15□□□□□ -0.3
CHEK1-207ENST00000525396 NKX1-2Q9UD57 310 aaPredicted RBP13.15□□□□□ -0.3
CHEK1-207ENST00000525396 ZNF391Q9UJN7 358 aa13.15□□□□□ -0.3
CHEK1-207ENST00000525396 GTF2A1LQ9UNN4 478 aa13.15□□□□□ -0.3
CHEK1-207ENST00000525396 IFNL4K9M1U5 179 aa13.14□□□□□ -0.31
CHEK1-207ENST00000525396 RPP14O95059 124 aaKnown RBP13.14□□□□□ -0.31
CHEK1-207ENST00000525396 TGFAP01135 160 aa13.14□□□□□ -0.31
CHEK1-207ENST00000525396 KRT8P05787 483 aa13.14□□□□□ -0.31
CHEK1-207ENST00000525396 ISL1P61371 349 aa13.14□□□□□ -0.31
CHEK1-207ENST00000525396 ZNF181Q2M3W8 571 aa13.14□□□□□ -0.31
CHEK1-207ENST00000525396 FAM201AQ5SY85 155 aa13.14□□□□□ -0.31
CHEK1-207ENST00000525396 BCL2L15Q5TBC7 163 aa13.14□□□□□ -0.31
CHEK1-207ENST00000525396 PEG10Q86TG7 708 aaKnown RBP13.14□□□□□ -0.31
CHEK1-207ENST00000525396 COMMD2Q86X83 199 aa13.14□□□□□ -0.31
CHEK1-207ENST00000525396 KLBQ86Z14 1044 aa13.14□□□□□ -0.31
CHEK1-207ENST00000525396 YIPF7Q8N8F6 280 aa13.14□□□□□ -0.31
CHEK1-207ENST00000525396 ZNF555Q8NEP9 628 aa13.14□□□□□ -0.31
CHEK1-207ENST00000525396 CSNK2A3Q8NEV1 391 aa13.14□□□□□ -0.31
CHEK1-207ENST00000525396 Q8TCH9 128 aa13.14□□□□□ -0.31
CHEK1-207ENST00000525396 LGALS12Q96DT0 336 aa13.14□□□□□ -0.31
CHEK1-207ENST00000525396 FGF23Q9GZV9 251 aaPredicted RBP13.14□□□□□ -0.31
CHEK1-207ENST00000525396 GPR84Q9NQS5 396 aa13.14□□□□□ -0.31
CHEK1-207ENST00000525396 C8orf4Q9NR00 106 aa13.14□□□□□ -0.31
CHEK1-207ENST00000525396 ACOXLQ9NUZ1 547 aa13.14□□□□□ -0.31
CHEK1-207ENST00000525396 OR52A1Q9UKL2 312 aa13.14□□□□□ -0.31
CHEK1-207ENST00000525396 KCNS2Q9ULS6 477 aa13.14□□□□□ -0.31
CHEK1-207ENST00000525396 ZFHX3Q15911 3703 aa13.14□□□□□ -0.31
CHEK1-207ENST00000525396 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.13□□□□□ -0.31
CHEK1-207ENST00000525396 METTL15A6NJ78 407 aa13.13□□□□□ -0.31
CHEK1-207ENST00000525396 MPZL2O60487 215 aa13.13□□□□□ -0.31
CHEK1-207ENST00000525396 LMX1BO60663 402 aa13.13□□□□□ -0.31
CHEK1-207ENST00000525396 CRLF1O75462 422 aa13.13□□□□□ -0.31
CHEK1-207ENST00000525396 WBP4O75554 376 aaKnown RBP13.13□□□□□ -0.31
CHEK1-207ENST00000525396 ZNF205O95201 554 aa13.13□□□□□ -0.31
CHEK1-207ENST00000525396 ACTC1P68032 377 aa13.13□□□□□ -0.31
CHEK1-207ENST00000525396 ACTA1P68133 377 aa13.13□□□□□ -0.31
CHEK1-207ENST00000525396 TP53I3Q53FA7 332 aa13.13□□□□□ -0.31
CHEK1-207ENST00000525396 ZNF691Q5VV52 312 aa13.13□□□□□ -0.31
CHEK1-207ENST00000525396 LIPNQ5VXI9 398 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms