RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 C1orf123Q9NWV4 160 aa15.51■□□□□ 0.07
CAPN1-203ENST00000525013 CLN8Q9UBY8 286 aa15.51■□□□□ 0.07
CAPN1-203ENST00000525013 hCG_1807616A0A1W2PRN6 198 aa15.5■□□□□ 0.07
CAPN1-203ENST00000525013 C3orf80F5H4A9 247 aa15.5■□□□□ 0.07
CAPN1-203ENST00000525013 PRODHO43272 600 aa15.5■□□□□ 0.07
CAPN1-203ENST00000525013 CD80P33681 288 aa15.5■□□□□ 0.07
CAPN1-203ENST00000525013 ACTG1P63261 375 aa15.5■□□□□ 0.07
CAPN1-203ENST00000525013 FAM3AP98173 230 aa15.5■□□□□ 0.07
CAPN1-203ENST00000525013 OR8B8Q15620 311 aa15.5■□□□□ 0.07
CAPN1-203ENST00000525013 SNAPC1Q16533 368 aa15.5■□□□□ 0.07
CAPN1-203ENST00000525013 SFRP4Q6FHJ7 346 aaPredicted RBP15.5■□□□□ 0.07
CAPN1-203ENST00000525013 RBMS3Q6XE24 437 aaKnown RBP15.5■□□□□ 0.07
CAPN1-203ENST00000525013 RHOUQ7L0Q8 258 aa15.5■□□□□ 0.07
CAPN1-203ENST00000525013 ZNF454Q8N9F8 522 aa15.5■□□□□ 0.07
CAPN1-203ENST00000525013 PLPP7Q8NBV4 271 aa15.5■□□□□ 0.07
CAPN1-203ENST00000525013 BBS1Q8NFJ9 593 aa15.5■□□□□ 0.07
CAPN1-203ENST00000525013 OTOSQ8NHW6 89 aa15.5■□□□□ 0.07
CAPN1-203ENST00000525013 RAB40AQ8WXH6 277 aa15.5■□□□□ 0.07
CAPN1-203ENST00000525013 NRBF2Q96F24 287 aa15.5■□□□□ 0.07
CAPN1-203ENST00000525013 NTN4Q9HB63 628 aa15.5■□□□□ 0.07
CAPN1-203ENST00000525013 PAPOLBQ9NRJ5 636 aaKnown RBP15.5■□□□□ 0.07
CAPN1-203ENST00000525013 TVP23BQ9NYZ1 205 aa15.5■□□□□ 0.07
CAPN1-203ENST00000525013 NUP50Q9UKX7 468 aa15.5■□□□□ 0.07
CAPN1-203ENST00000525013 IGHV2-70DA0A0C4DH43 119 aa15.49■□□□□ 0.07
CAPN1-203ENST00000525013 PTBP3O95758 552 aaKnown RBP15.49■□□□□ 0.07
CAPN1-203ENST00000525013 CFL1P23528 166 aaKnown RBP15.49■□□□□ 0.07
CAPN1-203ENST00000525013 GSK3AP49840 483 aa15.49■□□□□ 0.07
CAPN1-203ENST00000525013 PAX8Q06710 450 aa15.49■□□□□ 0.07
CAPN1-203ENST00000525013 BNIP1Q12981 228 aa15.49■□□□□ 0.07
CAPN1-203ENST00000525013 KCNJ8Q15842 424 aa15.49■□□□□ 0.07
CAPN1-203ENST00000525013 ZNF826PQ6ZT77 177 aa15.49■□□□□ 0.07
CAPN1-203ENST00000525013 PRSS45Q7RTY3 260 aa15.49■□□□□ 0.07
CAPN1-203ENST00000525013 SLC25A19Q9HC21 320 aa15.49■□□□□ 0.07
CAPN1-203ENST00000525013 ZNF319Q9P2F9 582 aa15.49■□□□□ 0.07
CAPN1-203ENST00000525013 LGALS8O00214 317 aa15.48■□□□□ 0.07
CAPN1-203ENST00000525013 GNALP38405 381 aa15.48■□□□□ 0.07
CAPN1-203ENST00000525013 RASSF2P50749 326 aa15.48■□□□□ 0.07
CAPN1-203ENST00000525013 CRISP1P54107 249 aa15.48■□□□□ 0.07
CAPN1-203ENST00000525013 PAX2Q02962 417 aa15.48■□□□□ 0.07
CAPN1-203ENST00000525013 APOFQ13790 326 aa15.48■□□□□ 0.07
CAPN1-203ENST00000525013 KLF17Q5JT82 389 aaPredicted RBP15.48■□□□□ 0.07
CAPN1-203ENST00000525013 SLC35D3Q5M8T2 416 aa15.48■□□□□ 0.07
CAPN1-203ENST00000525013 WDR25Q64LD2 544 aaPredicted RBP15.48■□□□□ 0.07
CAPN1-203ENST00000525013 LRRN1Q6UXK5 716 aa15.48■□□□□ 0.07
CAPN1-203ENST00000525013 C12orf54Q6X4T0 127 aa15.48■□□□□ 0.07
CAPN1-203ENST00000525013 SIGLECL1Q8N7X8 197 aa15.48■□□□□ 0.07
CAPN1-203ENST00000525013 FAM216AQ8WUB2 273 aa15.48■□□□□ 0.07
CAPN1-203ENST00000525013 DNAJC9Q8WXX5 260 aa15.48■□□□□ 0.07
CAPN1-203ENST00000525013 GCDHQ92947 438 aaPredicted RBP15.48■□□□□ 0.07
CAPN1-203ENST00000525013 UTP4Q969X6 686 aaKnown RBP15.48■□□□□ 0.07
CAPN1-203ENST00000525013 PAPOLGQ9BWT3 736 aaKnown RBP15.48■□□□□ 0.07
CAPN1-203ENST00000525013 ZNF69Q9UC07 566 aa15.48■□□□□ 0.07
CAPN1-203ENST00000525013 LAMP5Q9UJQ1 280 aa15.48■□□□□ 0.07
CAPN1-203ENST00000525013 KLHDC2Q9Y2U9 406 aa15.48■□□□□ 0.07
CAPN1-203ENST00000525013 NBEAL1Q6ZS30 2694 aa15.48■□□□□ 0.07
CAPN1-203ENST00000525013 IGHV3OR16-10A0A075B7F0 116 aa15.47■□□□□ 0.07
CAPN1-203ENST00000525013 TRAV38-1A0A0B4J264 116 aa15.47■□□□□ 0.07
CAPN1-203ENST00000525013 hCG_38984A0A1B0GV85 526 aa15.47■□□□□ 0.07
CAPN1-203ENST00000525013 PHYHO14832 338 aa15.47■□□□□ 0.07
CAPN1-203ENST00000525013 DAPP51397 102 aa15.47■□□□□ 0.07
CAPN1-203ENST00000525013 KRT77Q7Z794 578 aa15.47■□□□□ 0.07
CAPN1-203ENST00000525013 CSNK2A3Q8NEV1 391 aa15.47■□□□□ 0.07
CAPN1-203ENST00000525013 OR5K1Q8NHB7 308 aa15.47■□□□□ 0.07
CAPN1-203ENST00000525013 TECTBQ96PL2 329 aa15.47■□□□□ 0.07
CAPN1-203ENST00000525013 NUDT16L1Q9BRJ7 211 aaKnown RBP15.47■□□□□ 0.07
CAPN1-203ENST00000525013 RGCCQ9H4X1 137 aa15.47■□□□□ 0.07
CAPN1-203ENST00000525013 ESM1Q9NQ30 184 aa15.47■□□□□ 0.07
CAPN1-203ENST00000525013 ERVK-18Q9QC07 812 aa15.47■□□□□ 0.07
CAPN1-203ENST00000525013 RHBDD3Q9Y3P4 386 aa15.47■□□□□ 0.07
CAPN1-203ENST00000525013 KIR2DS1A0A191URI9 304 aa15.46■□□□□ 0.07
CAPN1-203ENST00000525013 OOEPA6NGQ2 149 aa15.46■□□□□ 0.07
CAPN1-203ENST00000525013 ADAM20O43506 726 aa15.46■□□□□ 0.07
CAPN1-203ENST00000525013 SLC2A5P22732 501 aa15.46■□□□□ 0.07
CAPN1-203ENST00000525013 PSMB10P40306 273 aa15.46■□□□□ 0.07
CAPN1-203ENST00000525013 HCCSP53701 268 aa15.46■□□□□ 0.07
CAPN1-203ENST00000525013 FAHD1Q6P587 224 aa15.46■□□□□ 0.07
CAPN1-203ENST00000525013 BCL6BQ8N143 479 aaPredicted RBP15.46■□□□□ 0.07
CAPN1-203ENST00000525013 FTMTQ8N4E7 242 aa15.46■□□□□ 0.07
CAPN1-203ENST00000525013 MS4A7Q9GZW8 240 aaPredicted RBP15.46■□□□□ 0.07
CAPN1-203ENST00000525013 PPP1R3EQ9H7J1 279 aa15.46■□□□□ 0.07
CAPN1-203ENST00000525013 TRIM36Q9NQ86 728 aa15.46■□□□□ 0.07
CAPN1-203ENST00000525013 IGHV3OR15-7A0A075B7D8 119 aa15.45■□□□□ 0.06
CAPN1-203ENST00000525013 ATP5HO75947 161 aa15.45■□□□□ 0.06
CAPN1-203ENST00000525013 GYPAP02724 150 aa15.45■□□□□ 0.06
CAPN1-203ENST00000525013 MRPL3P09001 348 aaKnown RBP15.45■□□□□ 0.06
CAPN1-203ENST00000525013 IGHV4-38-2P0DP08 117 aa15.45■□□□□ 0.06
CAPN1-203ENST00000525013 ALOX5APP20292 161 aa15.45■□□□□ 0.06
CAPN1-203ENST00000525013 POU4F2Q12837 409 aa15.45■□□□□ 0.06
CAPN1-203ENST00000525013 PTGES3Q15185 160 aaKnown RBP15.45■□□□□ 0.06
CAPN1-203ENST00000525013 ATP6AP1Q15904 470 aa15.45■□□□□ 0.06
CAPN1-203ENST00000525013 SNCBQ16143 134 aa15.45■□□□□ 0.06
CAPN1-203ENST00000525013 C1orf146Q5VVC0 180 aa15.45■□□□□ 0.06
CAPN1-203ENST00000525013 ZNF841Q6ZN19 808 aa15.45■□□□□ 0.06
CAPN1-203ENST00000525013 PARP8Q8N3A8 854 aa15.45■□□□□ 0.06
CAPN1-203ENST00000525013 ZDHHC22Q8N966 263 aa15.45■□□□□ 0.06
CAPN1-203ENST00000525013 OR1M1Q8NGA1 313 aa15.45■□□□□ 0.06
CAPN1-203ENST00000525013 TEAD3Q99594 435 aa15.45■□□□□ 0.06
CAPN1-203ENST00000525013 YIPF3Q9GZM5 350 aa15.45■□□□□ 0.06
CAPN1-203ENST00000525013 NIPAL2Q9H841 368 aa15.45■□□□□ 0.06
CAPN1-203ENST00000525013 KRT84Q9NSB2 600 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms