RNA–Protein interactions for RNA: ENST00000522855.5

SKP1-210, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SKP1, Length 802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-210ENST00000522855 BNIP2Q12982 314 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 PMS2P3Q13401 168 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 FLOT2Q14254 428 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 IRF4Q15306 451 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 DGUOKQ16854 277 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 FAM83EQ2M2I3 478 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 TTLL9Q3SXZ7 439 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 TMEM52BQ4KMG9 183 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 RBM48Q5RL73 367 aaKnown RBP3.22□□□□□ -1.89
SKP1-210ENST00000522855 CLVS2Q5SYC1 327 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 C6orf52Q5T4I8 152 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 LCE3CQ5T5A8 94 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 RSBN1Q5VWQ0 802 aaPredicted RBP3.22□□□□□ -1.89
SKP1-210ENST00000522855 ZYG11AQ6WRX3 759 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 ZCCHC23Q6ZST2 131 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 C16orf62Q7Z3J2 963 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 TRAPPC5Q8IUR0 188 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 C10orf107Q8IVU9 208 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 NKAIN4Q8IVV8 208 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 CPNE9Q8IYJ1 553 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 DEFB107AQ8IZN7 70 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 TCTE3Q8IZS6 198 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 TCAIMQ8N3R3 496 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 LIX1Q8N485 282 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 LINC00612Q8N6U2 182 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 FNDC5Q8NAU1 212 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 TSTD1Q8NFU3 115 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 CD200R1Q8TD46 325 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 SKA2Q8WVK7 121 aaPredicted RBP3.22□□□□□ -1.89
SKP1-210ENST00000522855 KLK6Q92876 244 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 OSTF1Q92882 214 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 RPL3LQ92901 407 aaKnown RBP3.22□□□□□ -1.89
SKP1-210ENST00000522855 PPWD1Q96BP3 646 aaKnown RBP3.22□□□□□ -1.89
SKP1-210ENST00000522855 SGK3Q96BR1 496 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 RNF170Q96K19 258 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 MRPL57Q9BQC6 102 aaKnown RBP3.22□□□□□ -1.89
SKP1-210ENST00000522855 DCUN1D5Q9BTE7 237 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 DEFB126Q9BYW3 111 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 NXF2Q9GZY0 626 aaKnown RBP3.22□□□□□ -1.89
SKP1-210ENST00000522855 IKZF5Q9H5V7 419 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 ZNF385DQ9H6B1 395 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 SYNDIG1Q9H7V2 258 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 NIPAL2Q9H841 368 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 EFCAB1Q9HAE3 211 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 NMRAL1Q9HBL8 299 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 POPDC3Q9HBV1 291 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 NANSQ9NR45 359 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 PTTG3PQ9NZH4 202 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 TMEM216Q9P0N5 145 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 SPRR3Q9UBC9 169 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 DCDC2Q9UHG0 476 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 ZNF639Q9UID6 485 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 KLHL21Q9UJP4 597 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 SCML1Q9UN30 329 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 PDE10AQ9Y233 779 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 VSIG4Q9Y279 399 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 TRAPPC4Q9Y296 219 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 CAB39Q9Y376 341 aaPredicted RBP3.22□□□□□ -1.89
SKP1-210ENST00000522855 PRRC2CQ9Y520 2896 aaKnown RBP3.22□□□□□ -1.89
SKP1-210ENST00000522855 APC2O95996 2303 aa3.22□□□□□ -1.89
SKP1-210ENST00000522855 TPRP12270 2363 aaKnown RBP3.22□□□□□ -1.89
SKP1-210ENST00000522855 ZFHX2Q9C0A1 2572 aaPredicted RBP3.21□□□□□ -1.9
SKP1-210ENST00000522855 SPEGQ15772 3267 aa3.21□□□□□ -1.9
SKP1-210ENST00000522855 IGLV8-61A0A075B6I0 122 aa3.21□□□□□ -1.9
SKP1-210ENST00000522855 FRG2CA6NGY1 282 aa3.21□□□□□ -1.9
SKP1-210ENST00000522855 A8MT66 165 aa3.21□□□□□ -1.9
SKP1-210ENST00000522855 CENPXA8MT69 81 aa3.21□□□□□ -1.9
SKP1-210ENST00000522855 NPIPA7E9PJI5 369 aa3.21□□□□□ -1.9
SKP1-210ENST00000522855 UBXN8O00124 270 aa3.21□□□□□ -1.9
SKP1-210ENST00000522855 CDC7O00311 574 aa3.21□□□□□ -1.9
SKP1-210ENST00000522855 CCRL2O00421 344 aa3.21□□□□□ -1.9
SKP1-210ENST00000522855 DLGAP1O14490 977 aa3.21□□□□□ -1.9
SKP1-210ENST00000522855 SLC31A1O15431 190 aa3.21□□□□□ -1.9
SKP1-210ENST00000522855 GATCO43716 136 aaKnown RBP3.21□□□□□ -1.9
SKP1-210ENST00000522855 OR1F1O43749 312 aa3.21□□□□□ -1.9
SKP1-210ENST00000522855 EFNA2O43921 213 aa3.21□□□□□ -1.9
SKP1-210ENST00000522855 SCRG1O75711 98 aa3.21□□□□□ -1.9
SKP1-210ENST00000522855 CCNKO75909 580 aa3.21□□□□□ -1.9
SKP1-210ENST00000522855 KCNK2O95069 426 aa3.21□□□□□ -1.9
SKP1-210ENST00000522855 TSPAN12O95859 305 aa3.21□□□□□ -1.9
SKP1-210ENST00000522855 TGM6O95932 706 aa3.21□□□□□ -1.9
SKP1-210ENST00000522855 F10P00742 488 aa3.21□□□□□ -1.9
SKP1-210ENST00000522855 SERPINE1P05121 402 aa3.21□□□□□ -1.9
SKP1-210ENST00000522855 BPGMP07738 259 aa3.21□□□□□ -1.9
SKP1-210ENST00000522855 RBP1P09455 135 aa3.21□□□□□ -1.9
SKP1-210ENST00000522855 NPIPA8P0DM63 369 aa3.21□□□□□ -1.9
SKP1-210ENST00000522855 COX4I1P13073 169 aa3.21□□□□□ -1.9
SKP1-210ENST00000522855 ICAM2P13598 275 aa3.21□□□□□ -1.9
SKP1-210ENST00000522855 ATP1B2P14415 290 aaPredicted RBP3.21□□□□□ -1.9
SKP1-210ENST00000522855 BGNP21810 368 aa3.21□□□□□ -1.9
SKP1-210ENST00000522855 KRTAP5-9P26371 169 aa3.21□□□□□ -1.9
SKP1-210ENST00000522855 RPL29P47914 159 aaKnown RBP3.21□□□□□ -1.9
SKP1-210ENST00000522855 PRLHRP49683 370 aa3.21□□□□□ -1.9
SKP1-210ENST00000522855 PPT1P50897 306 aa3.21□□□□□ -1.9
SKP1-210ENST00000522855 TPMTP51580 245 aa3.21□□□□□ -1.9
SKP1-210ENST00000522855 AQP5P55064 265 aa3.21□□□□□ -1.9
SKP1-210ENST00000522855 DEFA1P59665 94 aa3.21□□□□□ -1.9
SKP1-210ENST00000522855 DEFA3P59666 94 aa3.21□□□□□ -1.9
SKP1-210ENST00000522855 EWSR1Q01844 656 aaKnown RBP eCLIP3.21□□□□□ -1.9
SKP1-210ENST00000522855 ZNF45Q02386 682 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms