RNA–Protein interactions for RNA: ENST00000521918.6

SPIDR-216, Transcript of scaffold protein involved in DNA repair, human

TSL 4

Gene SPIDR, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-216	ENST00000521918	HOXB6	P17509	224 aa	Known RBP	4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	SPI1	P17947	270 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	TNFSF4	P23510	183 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	PYCR1	P32322	319 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	GRK5	P34947	590 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	RPS27	P42677	84 aa	Known RBP	4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	GPR6	P46095	362 aa	Predicted RBP	4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	RGS6	P49758	472 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	ARHGDIA	P52565	204 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	SLC25A1	P53007	311 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	CDH15	P55291	814 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	TMEM33	P57088	247 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	SELENOV	P59797	346 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	CCNI	Q14094	377 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	HLX	Q14774	488 aa	Predicted RBP	4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	MOG	Q16653	247 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	BEAN1	Q3B7T3	259 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	TEX30	Q5JUR7	227 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	IGFL4	Q6B9Z1	124 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	FAM166A	Q6J272	317 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	TMEM154	Q6P9G4	183 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	ARL9	Q6T311	187 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	UNQ6126/PRO20091	Q6UXV3	157 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	USP51	Q70EK9	711 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	IQCF1	Q8N6M8	205 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	PROKR2	Q8NFJ6	384 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	OR2T4	Q8NH00	348 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	TBC1D15	Q8TC07	691 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	ST7L	Q8TDW4	575 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	GIPC3	Q8TF64	312 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	LRTOMT	Q8WZ04	291 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	HAVCR1	Q96D42	359 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	FEV	Q99581	238 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	ATF6B	Q99941	703 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	WDR76	Q9H967	626 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	MARCH7	Q9H992	704 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	NTN4	Q9HB63	628 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	AKIP1	Q9NQ31	210 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	CYSLTR2	Q9NS75	346 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	DCAF16	Q9NXF7	216 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	PURG	Q9UJV8	347 aa	Known RBP	4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	BAIAP2	Q9UQB8	552 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	POLR1D	Q9Y2S0	133 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	GRIP1	Q9Y3R0	1128 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	WIPI2	Q9Y4P8	454 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	WNK2	Q9Y3S1	2297 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	FBN3	Q75N90	2809 aa		4.99	□□□□□ -1.61
SPIDR-216	ENST00000521918	TRRAP	Q9Y4A5	3859 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	PLSCR5	A0PG75	271 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	C5orf63	A6NC05	138 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	TVP23A	A6NH52	213 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	IQCF6	A8MYZ5	107 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918		M0R135	149 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	MLNR	O43193	412 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	SPRY3	O43610	288 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	TIMM8A	O60220	97 aa	Predicted RBP	4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	LMX1B	O60663	402 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	IGHV2-5	P01817	119 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	FAM157C	P0CG43	387 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	RBMX	P38159	391 aa	Known RBP	4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	LIPA	P38571	399 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	ENTPD1	P49961	510 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	CBX1	P83916	185 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	ECH1	Q13011	328 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	GK2	Q14410	553 aa	Predicted RBP	4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	TST	Q16762	297 aa	Known RBP	4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	CHRFAM7A	Q494W8	412 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	FAM120AOS	Q5T036	256 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	AVPI1	Q5T686	147 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	OR2T2	Q6IF00	324 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	ACSM5	Q6NUN0	579 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	MZT2A	Q6P582	158 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	FAHD1	Q6P587	224 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	SHQ1	Q6PI26	577 aa	Known RBP	4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	CRIP3	Q6Q6R5	217 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	SPATA24	Q86W54	205 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	TIGD4	Q8IY51	512 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	OR8G5	Q8NG78	346 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	OR51L1	Q8NGJ5	315 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	PTP4A1	Q93096	173 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	APOBEC3D	Q96AK3	386 aa	Predicted RBP	4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	CMBL	Q96DG6	245 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	ELMOD3	Q96FG2	381 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	DUS3L	Q96G46	650 aa	Known RBP	4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	ZNF799	Q96GE5	643 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	COG8	Q96MW5	612 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	SIGLEC11	Q96RL6	698 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	SLC30A2	Q9BRI3	323 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	NARFL	Q9H6Q4	476 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	MED20	Q9H944	212 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	SLC25A19	Q9HC21	320 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	PDP1	Q9P0J1	537 aa	Predicted RBP	4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	DNAJB9	Q9UBS3	223 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	LPAR3	Q9UBY5	353 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	ZDHHC8	Q9ULC8	765 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	KCNS2	Q9ULS6	477 aa		4.98	□□□□□ -1.61
SPIDR-216	ENST00000521918	FAM183A	A6NL82	134 aa		4.97	□□□□□ -1.61
SPIDR-216	ENST00000521918	RIIAD1	A6NNX1	92 aa		4.97	□□□□□ -1.61
SPIDR-216	ENST00000521918	CLDN25	C9JDP6	229 aa		4.97	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms