RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 CX3CR1P49238 355 aa12.56□□□□□ -0.4
CSMD1-207ENST00000520451 RAG2P55895 527 aa12.56□□□□□ -0.4
CSMD1-207ENST00000520451 GRB2P62993 217 aaKnown RBP12.56□□□□□ -0.4
CSMD1-207ENST00000520451 EIF2B1Q14232 305 aaKnown RBP12.56□□□□□ -0.4
CSMD1-207ENST00000520451 TIGD6Q17RP2 521 aa12.56□□□□□ -0.4
CSMD1-207ENST00000520451 TEX30Q5JUR7 227 aa12.56□□□□□ -0.4
CSMD1-207ENST00000520451 BTN2A1Q7KYR7 527 aa12.56□□□□□ -0.4
CSMD1-207ENST00000520451 TMEM86BQ8N661 226 aa12.56□□□□□ -0.4
CSMD1-207ENST00000520451 OR2T33Q8NG76 320 aa12.56□□□□□ -0.4
CSMD1-207ENST00000520451 OR4F5Q8NH21 305 aa12.56□□□□□ -0.4
CSMD1-207ENST00000520451 ST8SIA4Q92187 359 aa12.56□□□□□ -0.4
CSMD1-207ENST00000520451 LHX4Q969G2 390 aa12.56□□□□□ -0.4
CSMD1-207ENST00000520451 SPSB4Q96A44 273 aa12.56□□□□□ -0.4
CSMD1-207ENST00000520451 FAM71F1Q96KD3 344 aaPredicted RBP12.56□□□□□ -0.4
CSMD1-207ENST00000520451 BEX1Q9HBH7 125 aa12.56□□□□□ -0.4
CSMD1-207ENST00000520451 ACTR3BQ9P1U1 418 aa12.56□□□□□ -0.4
CSMD1-207ENST00000520451 BAIAP2Q9UQB8 552 aa12.56□□□□□ -0.4
CSMD1-207ENST00000520451 ARL2BPQ9Y2Y0 163 aa12.56□□□□□ -0.4
CSMD1-207ENST00000520451 RIIAD1A6NNX1 92 aa12.55□□□□□ -0.4
CSMD1-207ENST00000520451 FCN3O75636 299 aa12.55□□□□□ -0.4
CSMD1-207ENST00000520451 LHBP01229 141 aa12.55□□□□□ -0.4
CSMD1-207ENST00000520451 IFNGP01579 166 aa12.55□□□□□ -0.4
CSMD1-207ENST00000520451 HSD11B1P28845 292 aa12.55□□□□□ -0.4
CSMD1-207ENST00000520451 ARF6P62330 175 aa12.55□□□□□ -0.4
CSMD1-207ENST00000520451 FAM3AP98173 230 aa12.55□□□□□ -0.4
CSMD1-207ENST00000520451 PDCD1Q15116 288 aa12.55□□□□□ -0.4
CSMD1-207ENST00000520451 TEX36Q5VZQ5 186 aa12.55□□□□□ -0.4
CSMD1-207ENST00000520451 C17orf107Q6ZR85 190 aa12.55□□□□□ -0.4
CSMD1-207ENST00000520451 SLC16A9Q7RTY1 509 aa12.55□□□□□ -0.4
CSMD1-207ENST00000520451 KIR3DL3Q8N743 410 aa12.55□□□□□ -0.4
CSMD1-207ENST00000520451 LRRC29Q8WV35 223 aa12.55□□□□□ -0.4
CSMD1-207ENST00000520451 SSMEM1Q8WWF3 244 aa12.55□□□□□ -0.4
CSMD1-207ENST00000520451 WFDC12Q8WWY7 111 aa12.55□□□□□ -0.4
CSMD1-207ENST00000520451 REEP6Q96HR9 211 aa12.55□□□□□ -0.4
CSMD1-207ENST00000520451 SIRPDQ9H106 197 aa12.55□□□□□ -0.4
CSMD1-207ENST00000520451 ACOXLQ9NUZ1 547 aa12.55□□□□□ -0.4
CSMD1-207ENST00000520451 VNN3Q9NY84 501 aa12.55□□□□□ -0.4
CSMD1-207ENST00000520451 C1RLQ9NZP8 487 aa12.55□□□□□ -0.4
CSMD1-207ENST00000520451 SAMHD1Q9Y3Z3 626 aaKnown RBP12.55□□□□□ -0.4
CSMD1-207ENST00000520451 POMT1Q9Y6A1 747 aa12.55□□□□□ -0.4
CSMD1-207ENST00000520451 U3KQV3 271 aa12.55□□□□□ -0.4
CSMD1-207ENST00000520451 IGHV1-69DA0A0B4J2H0 117 aa12.54□□□□□ -0.4
CSMD1-207ENST00000520451 TCRBV5S2A0A599 114 aa12.54□□□□□ -0.4
CSMD1-207ENST00000520451 DCTN3O75935 186 aa12.54□□□□□ -0.4
CSMD1-207ENST00000520451 NDUFA7O95182 113 aa12.54□□□□□ -0.4
CSMD1-207ENST00000520451 ECDO95905 644 aaPredicted RBP12.54□□□□□ -0.4
CSMD1-207ENST00000520451 IGHV1-69P01742 117 aa12.54□□□□□ -0.4
CSMD1-207ENST00000520451 ZNF3P17036 446 aa12.54□□□□□ -0.4
CSMD1-207ENST00000520451 GRK5P34947 590 aa12.54□□□□□ -0.4
CSMD1-207ENST00000520451 BLVRAP53004 296 aa12.54□□□□□ -0.4
CSMD1-207ENST00000520451 RELBQ01201 579 aa12.54□□□□□ -0.4
CSMD1-207ENST00000520451 SRSF4Q08170 494 aaKnown RBP12.54□□□□□ -0.4
CSMD1-207ENST00000520451 MICBQ29980 383 aa12.54□□□□□ -0.4
CSMD1-207ENST00000520451 GFOD2Q3B7J2 385 aa12.54□□□□□ -0.4
CSMD1-207ENST00000520451 LINC01590Q5TEZ4 76 aa12.54□□□□□ -0.4
CSMD1-207ENST00000520451 DPY19L4Q7Z388 723 aa12.54□□□□□ -0.4
CSMD1-207ENST00000520451 WDR86Q86TI4 376 aa12.54□□□□□ -0.4
CSMD1-207ENST00000520451 ERI1Q8IV48 349 aaKnown RBP12.54□□□□□ -0.4
CSMD1-207ENST00000520451 SCCPDHQ8NBX0 429 aa12.54□□□□□ -0.4
CSMD1-207ENST00000520451 OR6N2Q8NGY6 317 aa12.54□□□□□ -0.4
CSMD1-207ENST00000520451 SGK3Q96BR1 496 aa12.54□□□□□ -0.4
CSMD1-207ENST00000520451 INTS14Q96SY0 518 aa12.54□□□□□ -0.4
CSMD1-207ENST00000520451 DGCR6LQ9BY27 220 aa12.54□□□□□ -0.4
CSMD1-207ENST00000520451 TOR3AQ9H497 397 aa12.54□□□□□ -0.4
CSMD1-207ENST00000520451 MAGIXQ9H6Y5 334 aa12.54□□□□□ -0.4
CSMD1-207ENST00000520451 REEP1Q9H902 201 aa12.54□□□□□ -0.4
CSMD1-207ENST00000520451 SP140LQ9H930 580 aa12.54□□□□□ -0.4
CSMD1-207ENST00000520451 MED20Q9H944 212 aa12.54□□□□□ -0.4
CSMD1-207ENST00000520451 DNAJC27Q9NZQ0 273 aa12.54□□□□□ -0.4
CSMD1-207ENST00000520451 KAAG1Q9UBP8 84 aa12.54□□□□□ -0.4
CSMD1-207ENST00000520451 A0A1B0GW55 424 aa12.53□□□□□ -0.4
CSMD1-207ENST00000520451 FAM183AA6NL82 134 aa12.53□□□□□ -0.4
CSMD1-207ENST00000520451 ATP8B1O43520 1251 aa12.53□□□□□ -0.4
CSMD1-207ENST00000520451 DUX4L2P0CJ85 424 aa12.53□□□□□ -0.4
CSMD1-207ENST00000520451 DUX4L3P0CJ86 424 aa12.53□□□□□ -0.4
CSMD1-207ENST00000520451 DUX4L4P0CJ87 422 aa12.53□□□□□ -0.4
CSMD1-207ENST00000520451 DUX4L5P0CJ88 424 aa12.53□□□□□ -0.4
CSMD1-207ENST00000520451 DUX4L6P0CJ89 424 aa12.53□□□□□ -0.4
CSMD1-207ENST00000520451 DUX4L7P0CJ90 424 aa12.53□□□□□ -0.4
CSMD1-207ENST00000520451 GNALP38405 381 aa12.53□□□□□ -0.4
CSMD1-207ENST00000520451 MNAT1P51948 309 aa12.53□□□□□ -0.4
CSMD1-207ENST00000520451 ZNF121P58317 390 aaPredicted RBP12.53□□□□□ -0.4
CSMD1-207ENST00000520451 GNGT1P63211 74 aa12.53□□□□□ -0.4
CSMD1-207ENST00000520451 CSNK2BP67870 215 aa12.53□□□□□ -0.4
CSMD1-207ENST00000520451 ELF3P78545 371 aaPredicted RBP12.53□□□□□ -0.4
CSMD1-207ENST00000520451 MICAQ29983 383 aa12.53□□□□□ -0.4
CSMD1-207ENST00000520451 C11orf91Q3C1V1 193 aa12.53□□□□□ -0.4
CSMD1-207ENST00000520451 OLFML2AQ68BL7 652 aa12.53□□□□□ -0.4
CSMD1-207ENST00000520451 OR2T5Q6IEZ7 315 aa12.53□□□□□ -0.4
CSMD1-207ENST00000520451 DUX4L9Q6RFH8 374 aaPredicted RBP12.53□□□□□ -0.4
CSMD1-207ENST00000520451 FAM57BQ71RH2 274 aa12.53□□□□□ -0.4
CSMD1-207ENST00000520451 C11orf53Q8IXP5 236 aa12.53□□□□□ -0.4
CSMD1-207ENST00000520451 PDZD9Q8IXQ8 264 aa12.53□□□□□ -0.4
CSMD1-207ENST00000520451 FGFRL1Q8N441 504 aa12.53□□□□□ -0.4
CSMD1-207ENST00000520451 OR1M1Q8NGA1 313 aa12.53□□□□□ -0.4
CSMD1-207ENST00000520451 OR2T29Q8NH02 315 aa12.53□□□□□ -0.4
CSMD1-207ENST00000520451 TBC1D15Q8TC07 691 aa12.53□□□□□ -0.4
CSMD1-207ENST00000520451 RNF133Q8WVZ7 376 aa12.53□□□□□ -0.4
CSMD1-207ENST00000520451 OTULINQ96BN8 352 aa12.53□□□□□ -0.4
CSMD1-207ENST00000520451 CCL13Q99616 98 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms