RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 EMC6Q9BV81 110 aa2.39□□□□□ -2.03
SQLE-202ENST00000518604 FRMD8P1Q9BZ68 369 aaPredicted RBP2.39□□□□□ -2.03
SQLE-202ENST00000518604 DEFB129Q9H1M3 183 aa2.39□□□□□ -2.03
SQLE-202ENST00000518604 ZNF442Q9H7R0 627 aa2.39□□□□□ -2.03
SQLE-202ENST00000518604 TREX1Q9NSU2 369 aa2.39□□□□□ -2.03
SQLE-202ENST00000518604 PCM1Q15154 2024 aa2.39□□□□□ -2.03
SQLE-202ENST00000518604 IGHV1-3A0A0C4DH29 117 aa2.38□□□□□ -2.03
SQLE-202ENST00000518604 H0YIV9 168 aa2.38□□□□□ -2.03
SQLE-202ENST00000518604 CASC3O15234 703 aaKnown RBP2.38□□□□□ -2.03
SQLE-202ENST00000518604 GATBO75879 557 aaKnown RBP2.38□□□□□ -2.03
SQLE-202ENST00000518604 GPR1P46091 355 aa2.38□□□□□ -2.03
SQLE-202ENST00000518604 TAS2R39P59534 338 aa2.38□□□□□ -2.03
SQLE-202ENST00000518604 OR2B8PP59922 312 aa2.38□□□□□ -2.03
SQLE-202ENST00000518604 ZNF33AQ06730 810 aa2.38□□□□□ -2.03
SQLE-202ENST00000518604 NAB1Q13506 487 aa2.38□□□□□ -2.03
SQLE-202ENST00000518604 ZNF547Q8IVP9 402 aa2.38□□□□□ -2.03
SQLE-202ENST00000518604 MIR7-3HGQ8N6C7 128 aa2.38□□□□□ -2.03
SQLE-202ENST00000518604 LRRC52Q8N7C0 313 aa2.38□□□□□ -2.03
SQLE-202ENST00000518604 OR5T1Q8NG75 326 aa2.38□□□□□ -2.03
SQLE-202ENST00000518604 OR1L1Q8NH94 360 aa2.38□□□□□ -2.03
SQLE-202ENST00000518604 ENKURQ8TC29 256 aa2.38□□□□□ -2.03
SQLE-202ENST00000518604 CSPG4P5Q96PW8 444 aa2.38□□□□□ -2.03
SQLE-202ENST00000518604 UQCC2Q9BRT2 126 aa2.38□□□□□ -2.03
SQLE-202ENST00000518604 PXMP2Q9NR77 195 aa2.38□□□□□ -2.03
SQLE-202ENST00000518604 NUP214P35658 2090 aaPredicted RBP2.38□□□□□ -2.03
SQLE-202ENST00000518604 IGKV1-27A0A075B6S5 117 aa2.37□□□□□ -2.03
SQLE-202ENST00000518604 SUPT3HB4E1H0 165 aa2.37□□□□□ -2.03
SQLE-202ENST00000518604 TDP2O95551 362 aa2.37□□□□□ -2.03
SQLE-202ENST00000518604 OXTP01178 125 aa2.37□□□□□ -2.03
SQLE-202ENST00000518604 PTHP01270 115 aa2.37□□□□□ -2.03
SQLE-202ENST00000518604 ASGR1P07306 291 aa2.37□□□□□ -2.03
SQLE-202ENST00000518604 TCP1P17987 556 aaKnown RBP2.37□□□□□ -2.03
SQLE-202ENST00000518604 CD82P27701 267 aa2.37□□□□□ -2.03
SQLE-202ENST00000518604 IRF8Q02556 426 aa2.37□□□□□ -2.03
SQLE-202ENST00000518604 FUT5Q11128 374 aa2.37□□□□□ -2.03
SQLE-202ENST00000518604 SLC39A6Q13433 755 aa2.37□□□□□ -2.03
SQLE-202ENST00000518604 HADHQ16836 314 aaKnown RBP2.37□□□□□ -2.03
SQLE-202ENST00000518604 SLC25A35Q3KQZ1 300 aa2.37□□□□□ -2.03
SQLE-202ENST00000518604 MFSD14CQ5VZR4 134 aa2.37□□□□□ -2.03
SQLE-202ENST00000518604 PLCXD3Q63HM9 321 aa2.37□□□□□ -2.03
SQLE-202ENST00000518604 FAM122BQ7Z309 247 aa2.37□□□□□ -2.03
SQLE-202ENST00000518604 GPX8Q8TED1 209 aa2.37□□□□□ -2.03
SQLE-202ENST00000518604 ASZ1Q8WWH4 475 aa2.37□□□□□ -2.03
SQLE-202ENST00000518604 IP6K3Q96PC2 410 aa2.37□□□□□ -2.03
SQLE-202ENST00000518604 KCNS3Q9BQ31 491 aa2.37□□□□□ -2.03
SQLE-202ENST00000518604 NCOR1P1Q9H4R4 102 aa2.37□□□□□ -2.03
SQLE-202ENST00000518604 ZSCAN16Q9H4T2 348 aaPredicted RBP2.37□□□□□ -2.03
SQLE-202ENST00000518604 ADGRA3Q8IWK6 1321 aa2.37□□□□□ -2.03
SQLE-202ENST00000518604 PLEKHG2Q9H7P9 1386 aa2.36□□□□□ -2.03
SQLE-202ENST00000518604 BRWD3Q6RI45 1802 aa2.36□□□□□ -2.03
SQLE-202ENST00000518604 BTNL10A8MVZ5 291 aa2.36□□□□□ -2.03
SQLE-202ENST00000518604 LGALS9O00182 355 aa2.36□□□□□ -2.03
SQLE-202ENST00000518604 MANBAO00462 879 aa2.36□□□□□ -2.03
SQLE-202ENST00000518604 ZBTB5O15062 677 aa2.36□□□□□ -2.03
SQLE-202ENST00000518604 HSBP1O75506 76 aa2.36□□□□□ -2.03
SQLE-202ENST00000518604 SERPINB7O75635 380 aa2.36□□□□□ -2.03
SQLE-202ENST00000518604 SCO1O75880 301 aa2.36□□□□□ -2.03
SQLE-202ENST00000518604 GABRG2P18507 467 aa2.36□□□□□ -2.03
SQLE-202ENST00000518604 APLNRP35414 380 aa2.36□□□□□ -2.03
SQLE-202ENST00000518604 ERFP50548 548 aa2.36□□□□□ -2.03
SQLE-202ENST00000518604 CCNG1P51959 295 aa2.36□□□□□ -2.03
SQLE-202ENST00000518604 YWHAEP62258 255 aaKnown RBP2.36□□□□□ -2.03
SQLE-202ENST00000518604 SPAG1Q07617 926 aa2.36□□□□□ -2.03
SQLE-202ENST00000518604 IGFBP7Q16270 282 aa2.36□□□□□ -2.03
SQLE-202ENST00000518604 C5orf64Q2M2E5 130 aa2.36□□□□□ -2.03
SQLE-202ENST00000518604 OPN5Q6U736 354 aa2.36□□□□□ -2.03
SQLE-202ENST00000518604 TMCO2Q7Z6W1 182 aaPredicted RBP2.36□□□□□ -2.03
SQLE-202ENST00000518604 LRRC75AQ8NAA5 344 aa2.36□□□□□ -2.03
SQLE-202ENST00000518604 DCAKDQ8WVC6 231 aa2.36□□□□□ -2.03
SQLE-202ENST00000518604 GHSRQ92847 366 aa2.36□□□□□ -2.03
SQLE-202ENST00000518604 DYNLL2Q96FJ2 89 aa2.36□□□□□ -2.03
SQLE-202ENST00000518604 KCNS1Q96KK3 526 aa2.36□□□□□ -2.03
SQLE-202ENST00000518604 OR4K3Q96R72 315 aa2.36□□□□□ -2.03
SQLE-202ENST00000518604 AHSPQ9NZD4 102 aa2.36□□□□□ -2.03
SQLE-202ENST00000518604 ZNF257Q9Y2Q1 563 aa2.36□□□□□ -2.03
SQLE-202ENST00000518604 UBIAD1Q9Y5Z9 338 aa2.36□□□□□ -2.03
SQLE-202ENST00000518604 WDR19Q8NEZ3 1342 aa2.36□□□□□ -2.03
SQLE-202ENST00000518604 COL27A1Q8IZC6 1860 aaPredicted RBP2.35□□□□□ -2.03
SQLE-202ENST00000518604 ADGRL1O94910 1474 aa2.35□□□□□ -2.03
SQLE-202ENST00000518604 IGHV3OR16-8A0A075B7F1 116 aa2.35□□□□□ -2.03
SQLE-202ENST00000518604 A0A1B0GTQ1 180 aa2.35□□□□□ -2.03
SQLE-202ENST00000518604 GOLGA8JA6NMD2 632 aa2.35□□□□□ -2.03
SQLE-202ENST00000518604 CENPBD1B2RD01 187 aa2.35□□□□□ -2.03
SQLE-202ENST00000518604 CTNSO60931 367 aa2.35□□□□□ -2.03
SQLE-202ENST00000518604 FARS2O95363 451 aaKnown RBP2.35□□□□□ -2.03
SQLE-202ENST00000518604 GOLGA8HP0CJ92 632 aa2.35□□□□□ -2.03
SQLE-202ENST00000518604 STAG3L3P0CL85 134 aa2.35□□□□□ -2.03
SQLE-202ENST00000518604 RNASE2P10153 161 aaKnown RBP2.35□□□□□ -2.03
SQLE-202ENST00000518604 HSPD1P10809 573 aaKnown RBP2.35□□□□□ -2.03
SQLE-202ENST00000518604 RALBP11234 206 aa2.35□□□□□ -2.03
SQLE-202ENST00000518604 BMI1P35226 326 aa2.35□□□□□ -2.03
SQLE-202ENST00000518604 GGT2P36268 569 aa2.35□□□□□ -2.03
SQLE-202ENST00000518604 CLDN8P56748 225 aa2.35□□□□□ -2.03
SQLE-202ENST00000518604 RAB11AP62491 216 aa2.35□□□□□ -2.03
SQLE-202ENST00000518604 RAB11BQ15907 218 aa2.35□□□□□ -2.03
SQLE-202ENST00000518604 ZNF101Q8IZC7 436 aa2.35□□□□□ -2.03
SQLE-202ENST00000518604 KLF14Q8TD94 323 aaPredicted RBP2.35□□□□□ -2.03
SQLE-202ENST00000518604 CA5BP1Q8WTZ4 195 aa2.35□□□□□ -2.03
SQLE-202ENST00000518604 NAT6Q93015 286 aa2.35□□□□□ -2.03
SQLE-202ENST00000518604 APH1AQ96BI3 265 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms