RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 ZNF629Q9UEG4 869 aaPredicted RBP9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 LOXL2Q9Y4K0 774 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 NBASA2RRP1 2371 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 TMEM200CA6NKL6 621 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 HS3ST1O14792 307 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 SPINT1O43278 529 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 KLF4O43474 513 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 CTAG2O75638 210 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 NKX2-2O95096 273 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 SNRNP70P08621 437 aaKnown RBP9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 CT62P0C5K7 136 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 CDAP32320 146 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 EDDM3AQ14507 147 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 TAF9Q16594 264 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 NHLRC3Q5JS37 347 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 AVPI1Q5T686 147 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 SHEQ5VZ18 495 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 OVCH2Q7RTZ1 564 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 VN1R1Q9GZP7 353 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 B9D1Q9UPM9 204 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 PTP4A3O75365 173 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 HOXD4P09016 255 aaPredicted RBP9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 ALOX5APP20292 161 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 NME2P22392 152 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 ALDH3B1P43353 468 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 PPT1P50897 306 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 IDH3GP51553 393 aaPredicted RBP9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 IL10RAQ13651 578 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 SLC17A1Q14916 467 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 ZNF425Q6IV72 752 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 CBLN3Q6UW01 205 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 DOK3Q7L591 496 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 FAM122BQ7Z309 247 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 VASH2Q86V25 355 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 OR5M9Q8NGP3 310 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 SLC25A38Q96DW6 304 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 ZNF275Q9NSD4 429 aaPredicted RBP9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 UFSP2Q9NUQ7 469 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 C1orf123Q9NWV4 160 aa9.73□□□□□ -0.85
PCDHGA1-202ENST00000517417 MSTNO14793 375 aa9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 EML2O95834 649 aa9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 IFNA4P05014 189 aa9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 VSIG10L2P0DP72 767 aa9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 CDKN2AP42771 156 aaKnown RBP9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 PLA2G7Q13093 441 aa9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 THEM4Q5T1C6 240 aa9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 RGS7BPQ6MZT1 257 aaPredicted RBP9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 GNRHR2Q96P88 292 aa9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 C12orf57Q99622 126 aa9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 PRRX2Q99811 253 aa9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 SCPEP1Q9HB40 452 aa9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 K7EQS6 105 aa9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 SIGLEC5O15389 551 aa9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 TUSC2O75896 110 aa9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 RBP2P50120 134 aa9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 SNRPNP63162 240 aaKnown RBP9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 SIGLEC14Q08ET2 396 aa9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 PCK2Q16822 640 aa9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 OR52W1Q6IF63 320 aa9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 ANKRD16Q6P6B7 361 aa9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 OR2W3Q7Z3T1 314 aa9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 OR1N1Q8NGS0 311 aa9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 OR52N5Q8NH56 324 aa9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 OR51F2Q8NH61 342 aa9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 OR1L3Q8NH93 324 aa9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 ROBO4Q8WZ75 1007 aa9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 IER2Q9BTL4 223 aa9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 TMPRSS13Q9BYE2 586 aa9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 OR6C76A6NM76 312 aa9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 ARPC3O15145 178 aa9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 GPR137BO60478 399 aa9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 CLDN15P56746 228 aa9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 NANOS3P60323 173 aaKnown RBP9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 TFF2Q03403 129 aa9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 EGR3Q06889 387 aa9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 PRICKLE4Q2TBC4 344 aa9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 NPEPL1Q8NDH3 523 aa9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 TMED6Q8WW62 240 aa9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 ALKBH3Q96Q83 286 aaPredicted RBP9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 CSAG2Q9Y5P2 127 aa9.72□□□□□ -0.85
PCDHGA1-202ENST00000517417 A0A1W2PPV4 95 aa9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 MOSPD3O75425 235 aa9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 ZIC2O95409 532 aaPredicted RBP9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 GPANK1O95872 356 aa9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 B4GALT1P15291 398 aa9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 PTGER4P35408 488 aa9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 CLN3Q13286 438 aa9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 PEA15Q15121 130 aa9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 MPPED2Q15777 294 aa9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 PAN3Q58A45 887 aaKnown RBP9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 DCAF12L2Q5VW00 463 aa9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 C11orf87Q6NUJ2 197 aa9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 MDGA2Q7Z553 956 aa9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 FJX1Q86VR8 437 aa9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 WDR5BQ86VZ2 330 aa9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 DMBX1Q8NFW5 382 aa9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 OR51H1Q8NH63 302 aa9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 ZPLD1Q8TCW7 415 aa9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 ASB13Q8WXK3 278 aa9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 RDH5Q92781 318 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms