RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 OR2T29Q8NH02 315 aa10.41□□□□□ -0.74
VEGFA-216ENST00000512683 OR4Q3Q8NH05 313 aa10.41□□□□□ -0.74
VEGFA-216ENST00000512683 CLPTM1LQ96KA5 538 aa10.41□□□□□ -0.74
VEGFA-216ENST00000512683 TBX15Q96SF7 602 aa10.41□□□□□ -0.74
VEGFA-216ENST00000512683 NMNAT2Q9BZQ4 307 aa10.41□□□□□ -0.74
VEGFA-216ENST00000512683 UFSP2Q9NUQ7 469 aa10.41□□□□□ -0.74
VEGFA-216ENST00000512683 PDP1Q9P0J1 537 aaPredicted RBP10.41□□□□□ -0.74
VEGFA-216ENST00000512683 U3KQV3 271 aa10.41□□□□□ -0.74
VEGFA-216ENST00000512683 IGHV3-64DA0A0J9YX35 117 aa10.4□□□□□ -0.74
VEGFA-216ENST00000512683 MDFIC2A0A1B0GVS7 189 aa10.4□□□□□ -0.74
VEGFA-216ENST00000512683 C5orf63A6NC05 138 aa10.4□□□□□ -0.74
VEGFA-216ENST00000512683 TVP23AA6NH52 213 aa10.4□□□□□ -0.74
VEGFA-216ENST00000512683 ACOT8O14734 319 aa10.4□□□□□ -0.74
VEGFA-216ENST00000512683 TIPRLO75663 272 aa10.4□□□□□ -0.74
VEGFA-216ENST00000512683 SOX14O95416 240 aa10.4□□□□□ -0.74
VEGFA-216ENST00000512683 APOC1P02654 83 aa10.4□□□□□ -0.74
VEGFA-216ENST00000512683 IER3P46695 156 aa10.4□□□□□ -0.74
VEGFA-216ENST00000512683 BLVRAP53004 296 aa10.4□□□□□ -0.74
VEGFA-216ENST00000512683 RELBQ01201 579 aa10.4□□□□□ -0.74
VEGFA-216ENST00000512683 CRMP1Q14194 572 aa10.4□□□□□ -0.74
VEGFA-216ENST00000512683 OR8B8Q15620 311 aa10.4□□□□□ -0.74
VEGFA-216ENST00000512683 TAF9Q16594 264 aa10.4□□□□□ -0.74
VEGFA-216ENST00000512683 PCK2Q16822 640 aa10.4□□□□□ -0.74
VEGFA-216ENST00000512683 CDONQ4KMG0 1287 aa10.4□□□□□ -0.74
VEGFA-216ENST00000512683 FAM98BQ52LJ0 330 aaKnown RBP10.4□□□□□ -0.74
VEGFA-216ENST00000512683 TEX30Q5JUR7 227 aa10.4□□□□□ -0.74
VEGFA-216ENST00000512683 TEX36Q5VZQ5 186 aa10.4□□□□□ -0.74
VEGFA-216ENST00000512683 BRICD5Q6PL45 260 aa10.4□□□□□ -0.74
VEGFA-216ENST00000512683 METAP1DQ6UB28 335 aaPredicted RBP10.4□□□□□ -0.74
VEGFA-216ENST00000512683 C1orf122Q6ZSJ8 110 aa10.4□□□□□ -0.74
VEGFA-216ENST00000512683 PROKR2Q8NFJ6 384 aa10.4□□□□□ -0.74
VEGFA-216ENST00000512683 OR2T4Q8NH00 348 aa10.4□□□□□ -0.74
VEGFA-216ENST00000512683 C12orf43Q96C57 262 aaKnown RBP10.4□□□□□ -0.74
VEGFA-216ENST00000512683 ASB9Q96DX5 294 aa10.4□□□□□ -0.74
VEGFA-216ENST00000512683 TSSK6Q9BXA6 273 aa10.4□□□□□ -0.74
VEGFA-216ENST00000512683 DGCR6LQ9BY27 220 aa10.4□□□□□ -0.74
VEGFA-216ENST00000512683 SIRPDQ9H106 197 aa10.4□□□□□ -0.74
VEGFA-216ENST00000512683 C1orf21Q9H246 121 aa10.4□□□□□ -0.74
VEGFA-216ENST00000512683 MMADHCQ9H3L0 296 aaPredicted RBP10.4□□□□□ -0.74
VEGFA-216ENST00000512683 C16orf95Q9H693 158 aa10.4□□□□□ -0.74
VEGFA-216ENST00000512683 MARCH7Q9H992 704 aa10.4□□□□□ -0.74
VEGFA-216ENST00000512683 TBC1D23Q9NUY8 699 aa10.4□□□□□ -0.74
VEGFA-216ENST00000512683 PRPF19Q9UMS4 504 aaKnown RBP10.4□□□□□ -0.74
VEGFA-216ENST00000512683 SAMHD1Q9Y3Z3 626 aaKnown RBP10.4□□□□□ -0.74
VEGFA-216ENST00000512683 RNF114Q9Y508 228 aa10.4□□□□□ -0.74
VEGFA-216ENST00000512683 COMMD3-BMI1R4GMX3 469 aa10.4□□□□□ -0.74
VEGFA-216ENST00000512683 NOTCH1P46531 2555 aa10.39□□□□□ -0.75
VEGFA-216ENST00000512683 A0A1B0GVI7 797 aa10.39□□□□□ -0.75
VEGFA-216ENST00000512683 XRCC2O43543 280 aa10.39□□□□□ -0.75
VEGFA-216ENST00000512683 GYPBP06028 91 aa10.39□□□□□ -0.75
VEGFA-216ENST00000512683 SFTPBP07988 381 aa10.39□□□□□ -0.75
VEGFA-216ENST00000512683 CLUP10909 449 aa10.39□□□□□ -0.75
VEGFA-216ENST00000512683 CFL1P23528 166 aaKnown RBP10.39□□□□□ -0.75
VEGFA-216ENST00000512683 NAA10P41227 235 aaPredicted RBP10.39□□□□□ -0.75
VEGFA-216ENST00000512683 SLC15A1P46059 708 aa10.39□□□□□ -0.75
VEGFA-216ENST00000512683 PROK1P58294 105 aa10.39□□□□□ -0.75
VEGFA-216ENST00000512683 ZNF92Q03936 586 aa10.39□□□□□ -0.75
VEGFA-216ENST00000512683 MICBQ29980 383 aa10.39□□□□□ -0.75
VEGFA-216ENST00000512683 SNAI3Q3KNW1 292 aa10.39□□□□□ -0.75
VEGFA-216ENST00000512683 PRAMEF6Q5VXH4 476 aa10.39□□□□□ -0.75
VEGFA-216ENST00000512683 SFRP4Q6FHJ7 346 aaPredicted RBP10.39□□□□□ -0.75
VEGFA-216ENST00000512683 CD300LDQ6UXZ3 194 aa10.39□□□□□ -0.75
VEGFA-216ENST00000512683 BTN2A1Q7KYR7 527 aa10.39□□□□□ -0.75
VEGFA-216ENST00000512683 RHOUQ7L0Q8 258 aa10.39□□□□□ -0.75
VEGFA-216ENST00000512683 ADGRG5Q8IZF4 528 aa10.39□□□□□ -0.75
VEGFA-216ENST00000512683 CMTM4Q8IZR5 234 aa10.39□□□□□ -0.75
VEGFA-216ENST00000512683 DTX3Q8N9I9 347 aa10.39□□□□□ -0.75
VEGFA-216ENST00000512683 ZSCAN4Q8NAM6 433 aaPredicted RBP10.39□□□□□ -0.75
VEGFA-216ENST00000512683 ZNF511Q8NB15 262 aa10.39□□□□□ -0.75
VEGFA-216ENST00000512683 LINC01006Q8NI28 216 aa10.39□□□□□ -0.75
VEGFA-216ENST00000512683 ITFG2Q969R8 447 aa10.39□□□□□ -0.75
VEGFA-216ENST00000512683 SPSB4Q96A44 273 aa10.39□□□□□ -0.75
VEGFA-216ENST00000512683 KCNJ15Q99712 375 aa10.39□□□□□ -0.75
VEGFA-216ENST00000512683 NIPSNAP1Q9BPW8 284 aa10.39□□□□□ -0.75
VEGFA-216ENST00000512683 ADAT1Q9BUB4 502 aaKnown RBP10.39□□□□□ -0.75
VEGFA-216ENST00000512683 REEP1Q9H902 201 aa10.39□□□□□ -0.75
VEGFA-216ENST00000512683 ARMC1Q9NVT9 282 aa10.39□□□□□ -0.75
VEGFA-216ENST00000512683 C1orf123Q9NWV4 160 aa10.39□□□□□ -0.75
VEGFA-216ENST00000512683 CTSZQ9UBR2 303 aa10.39□□□□□ -0.75
VEGFA-216ENST00000512683 BAIAP2Q9UQB8 552 aa10.39□□□□□ -0.75
VEGFA-216ENST00000512683 FAM96BQ9Y3D0 163 aa10.39□□□□□ -0.75
VEGFA-216ENST00000512683 ANKRD30BLA7E2S9 258 aa10.38□□□□□ -0.75
VEGFA-216ENST00000512683 C3orf80F5H4A9 247 aa10.38□□□□□ -0.75
VEGFA-216ENST00000512683 DVL1O14640 695 aa10.38□□□□□ -0.75
VEGFA-216ENST00000512683 GPR137BO60478 399 aa10.38□□□□□ -0.75
VEGFA-216ENST00000512683 RAP2AP10114 183 aa10.38□□□□□ -0.75
VEGFA-216ENST00000512683 SPI1P17947 270 aa10.38□□□□□ -0.75
VEGFA-216ENST00000512683 SLC25A1P53007 311 aa10.38□□□□□ -0.75
VEGFA-216ENST00000512683 ARF6P62330 175 aa10.38□□□□□ -0.75
VEGFA-216ENST00000512683 GUCA2AQ02747 115 aa10.38□□□□□ -0.75
VEGFA-216ENST00000512683 ATPAF1Q5TC12 328 aaPredicted RBP10.38□□□□□ -0.75
VEGFA-216ENST00000512683 LINC01590Q5TEZ4 76 aa10.38□□□□□ -0.75
VEGFA-216ENST00000512683 ASPHD2Q6ICH7 369 aa10.38□□□□□ -0.75
VEGFA-216ENST00000512683 SLC36A1Q7Z2H8 476 aa10.38□□□□□ -0.75
VEGFA-216ENST00000512683 DCXRQ7Z4W1 244 aa10.38□□□□□ -0.75
VEGFA-216ENST00000512683 TMEM179BQ7Z7N9 219 aa10.38□□□□□ -0.75
VEGFA-216ENST00000512683 GCSAMQ8N6F7 178 aa10.38□□□□□ -0.75
VEGFA-216ENST00000512683 LY6G5BQ8NDX9 201 aa10.38□□□□□ -0.75
VEGFA-216ENST00000512683 OR2T33Q8NG76 320 aa10.38□□□□□ -0.75
VEGFA-216ENST00000512683 UBE2FQ969M7 185 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms