RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 GPR61Q9BZJ8 451 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 PBOV1Q9GZY1 135 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 BANF2Q9H503 90 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 NXT2Q9NPJ8 142 aaKnown RBP8.06□□□□□ -1.12
VCAN-208ENST00000512590 PSENENQ9NZ42 101 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 SHPKQ9UHJ6 478 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 IGHV3OR16-10A0A075B7F0 116 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 M0R082 166 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 CACNG3O60359 315 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 OR5AL1P0C617 328 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 DUSP1P28562 367 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 HNRNPA3P51991 378 aaKnown RBP8.06□□□□□ -1.12
VCAN-208ENST00000512590 AQP4P55087 323 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 KIAA0141Q14154 515 aaPredicted RBP8.06□□□□□ -1.12
VCAN-208ENST00000512590 KRTCAP3Q53RY4 240 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 ACER2Q5QJU3 275 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 TMUB2Q71RG4 321 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 OR4S1Q8NGB4 309 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 OR4C13Q8NGP0 309 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 OR1L3Q8NH93 324 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 ZNF516Q92618 1163 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 TMEM101Q96IK0 257 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 MRGPRX4Q96LA9 322 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 DERL3Q96Q80 235 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 SLC2A9Q9NRM0 540 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 RYDENQ9NUL5 291 aaKnown RBP8.06□□□□□ -1.12
VCAN-208ENST00000512590 WASHC3Q9Y3C0 194 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 CACNG2Q9Y698 323 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 HYAL3O43820 417 aaPredicted RBP8.06□□□□□ -1.12
VCAN-208ENST00000512590 CGB3P0DN86 165 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 CST5P28325 142 aaPredicted RBP8.06□□□□□ -1.12
VCAN-208ENST00000512590 LTBRP36941 435 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 WNT4P56705 351 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 PGGHGQ32M88 737 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 H3F3CQ6NXT2 135 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 MDP1Q86V88 176 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 ANGPTL5Q86XS5 388 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 RNF113BQ8IZP6 322 aaKnown RBP8.06□□□□□ -1.12
VCAN-208ENST00000512590 ZBTB34Q8NCN2 500 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 EAF1Q96JC9 268 aaPredicted RBP8.06□□□□□ -1.12
VCAN-208ENST00000512590 C16orf92Q96LL3 132 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 FCGR3BO75015 233 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 CGB7P0DN87 165 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 CDKN2DP55273 166 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 IGFBP7Q16270 282 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 RNF151Q2KHN1 245 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 TRMT12Q53H54 448 aaKnown RBP8.06□□□□□ -1.12
VCAN-208ENST00000512590 MRGPRX3Q96LB0 322 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 CABLES2Q9BTV7 478 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 MAGIXQ9H6Y5 334 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 MRPL22Q9NWU5 206 aaKnown RBP8.06□□□□□ -1.12
VCAN-208ENST00000512590 FETUBQ9UGM5 382 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 RCL1Q9Y2P8 373 aaKnown RBP8.06□□□□□ -1.12
VCAN-208ENST00000512590 DIP2BQ9P265 1576 aa8.06□□□□□ -1.12
VCAN-208ENST00000512590 FAM72CH0Y354 149 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 RGS13O14921 159 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 CEACAM8P31997 349 aaPredicted RBP8.05□□□□□ -1.12
VCAN-208ENST00000512590 NKX2-5P52952 324 aaPredicted RBP8.05□□□□□ -1.12
VCAN-208ENST00000512590 FAM72AQ5TYM5 149 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 FAM72DQ6L9T8 149 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 FAM72BQ86X60 149 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 STXBP6Q8NFX7 210 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 OR1N2Q8NGR9 330 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 ITLN2Q8WWU7 325 aaPredicted RBP8.05□□□□□ -1.12
VCAN-208ENST00000512590 MRGPRX1Q96LB2 322 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 NIPSNAP3BQ9BS92 247 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 ASB4Q9Y574 426 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 LOC100289279A0A1B0GTE1 492 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 PGPA6NDG6 321 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 FAM159BA6NKW6 160 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 SLC25A4P12235 298 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 HOXD9P28356 352 aaPredicted RBP8.05□□□□□ -1.12
VCAN-208ENST00000512590 PTGFRP43088 359 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 CFAP161Q6P656 301 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 Q6ZS52 159 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 PELI3Q8N2H9 469 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 SIGLECL1Q8N7X8 197 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 OR2G3Q8NGZ4 309 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 ARRDC2Q8TBH0 407 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 FOXB1Q99853 325 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 POFUT1Q9H488 388 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 PRAF2O60831 178 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 SBK3P0C264 359 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 FOXK2Q01167 660 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 PAQR6Q6TCH4 344 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 DPY19L2P2Q6ZN68 376 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 CCDC71Q8IV32 467 aaPredicted RBP8.05□□□□□ -1.12
VCAN-208ENST00000512590 OR52H1Q8NGJ2 320 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 AKR7LQ8NHP1 331 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 OR51E1Q8TCB6 317 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 SFT2D1Q8WV19 159 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 ADAMTS14Q8WXS8 1223 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 NPAS1Q99742 590 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 EBF4Q9BQW3 602 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 PPIL3Q9H2H8 161 aaKnown RBP8.05□□□□□ -1.12
VCAN-208ENST00000512590 FSCN3Q9NQT6 498 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.05□□□□□ -1.12
VCAN-208ENST00000512590 ASH2LQ9UBL3 628 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 ZNF230Q9UIE0 474 aaPredicted RBP8.05□□□□□ -1.12
VCAN-208ENST00000512590 PHLPP1O60346 1717 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms