RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 DUX4L4P0CJ87 422 aa18.77■□□□□ 0.6
SMAD5-207ENST00000511116 DUX4L5P0CJ88 424 aa18.77■□□□□ 0.6
SMAD5-207ENST00000511116 DUX4L6P0CJ89 424 aa18.77■□□□□ 0.6
SMAD5-207ENST00000511116 DUX4L7P0CJ90 424 aa18.77■□□□□ 0.6
SMAD5-207ENST00000511116 IFNGR2P38484 337 aa18.77■□□□□ 0.6
SMAD5-207ENST00000511116 PGBD2Q6P3X8 592 aa18.77■□□□□ 0.6
SMAD5-207ENST00000511116 DUX4L9Q6RFH8 374 aaPredicted RBP18.77■□□□□ 0.6
SMAD5-207ENST00000511116 LYPD4Q6UWN0 246 aa18.77■□□□□ 0.6
SMAD5-207ENST00000511116 DCXRQ7Z4W1 244 aa18.77■□□□□ 0.6
SMAD5-207ENST00000511116 OR2T4Q8NH00 348 aa18.77■□□□□ 0.6
SMAD5-207ENST00000511116 C8orf46Q8TAG6 207 aa18.77■□□□□ 0.6
SMAD5-207ENST00000511116 ST8SIA4Q92187 359 aa18.77■□□□□ 0.6
SMAD5-207ENST00000511116 DUX4Q9UBX2 424 aa18.77■□□□□ 0.6
SMAD5-207ENST00000511116 VPREB3Q9UKI3 123 aa18.77■□□□□ 0.6
SMAD5-207ENST00000511116 hCG_1807616A0A1W2PRN6 198 aa18.76■□□□□ 0.59
SMAD5-207ENST00000511116 TVP23AA6NH52 213 aa18.76■□□□□ 0.59
SMAD5-207ENST00000511116 FBP1P09467 338 aa18.76■□□□□ 0.59
SMAD5-207ENST00000511116 POU4F2Q12837 409 aa18.76■□□□□ 0.59
SMAD5-207ENST00000511116 MICBQ29980 383 aa18.76■□□□□ 0.59
SMAD5-207ENST00000511116 WDR38Q5JTN6 314 aa18.76■□□□□ 0.59
SMAD5-207ENST00000511116 TEX30Q5JUR7 227 aa18.76■□□□□ 0.59
SMAD5-207ENST00000511116 WDR82Q6UXN9 313 aa18.76■□□□□ 0.59
SMAD5-207ENST00000511116 CYB561A3Q8NBI2 242 aa18.76■□□□□ 0.59
SMAD5-207ENST00000511116 PROKR2Q8NFJ6 384 aa18.76■□□□□ 0.59
SMAD5-207ENST00000511116 GNPDA2Q8TDQ7 276 aa18.76■□□□□ 0.59
SMAD5-207ENST00000511116 C12orf43Q96C57 262 aaKnown RBP18.76■□□□□ 0.59
SMAD5-207ENST00000511116 COPS4Q9BT78 406 aa18.76■□□□□ 0.59
SMAD5-207ENST00000511116 NSRP1Q9H0G5 558 aaKnown RBP18.76■□□□□ 0.59
SMAD5-207ENST00000511116 TLNRD1Q9H1K6 362 aa18.76■□□□□ 0.59
SMAD5-207ENST00000511116 PRPF19Q9UMS4 504 aaKnown RBP18.76■□□□□ 0.59
SMAD5-207ENST00000511116 CAB39Q9Y376 341 aaPredicted RBP18.76■□□□□ 0.59
SMAD5-207ENST00000511116 CDH10Q9Y6N8 788 aa18.76■□□□□ 0.59
SMAD5-207ENST00000511116 RNASEK-C17orf49H0YIS7 233 aa18.75■□□□□ 0.59
SMAD5-207ENST00000511116 SLC2A1P11166 492 aa18.75■□□□□ 0.59
SMAD5-207ENST00000511116 AMY2BP19961 511 aa18.75■□□□□ 0.59
SMAD5-207ENST00000511116 GRK5P34947 590 aa18.75■□□□□ 0.59
SMAD5-207ENST00000511116 TGM4P49221 684 aa18.75■□□□□ 0.59
SMAD5-207ENST00000511116 PRKXP51817 358 aa18.75■□□□□ 0.59
SMAD5-207ENST00000511116 ELF3P78545 371 aaPredicted RBP18.75■□□□□ 0.59
SMAD5-207ENST00000511116 FAM3AP98173 230 aa18.75■□□□□ 0.59
SMAD5-207ENST00000511116 ATPAF1Q5TC12 328 aaPredicted RBP18.75■□□□□ 0.59
SMAD5-207ENST00000511116 RPL13AP3Q6NVV1 102 aa18.75■□□□□ 0.59
SMAD5-207ENST00000511116 PDZD9Q8IXQ8 264 aa18.75■□□□□ 0.59
SMAD5-207ENST00000511116 Q8N7P7 452 aa18.75■□□□□ 0.59
SMAD5-207ENST00000511116 OR1M1Q8NGA1 313 aa18.75■□□□□ 0.59
SMAD5-207ENST00000511116 LRRC29Q8WV35 223 aa18.75■□□□□ 0.59
SMAD5-207ENST00000511116 TNFRSF14Q92956 283 aa18.75■□□□□ 0.59
SMAD5-207ENST00000511116 SLAMF6Q96DU3 332 aa18.75■□□□□ 0.59
SMAD5-207ENST00000511116 CCL13Q99616 98 aa18.75■□□□□ 0.59
SMAD5-207ENST00000511116 NMNAT2Q9BZQ4 307 aa18.75■□□□□ 0.59
SMAD5-207ENST00000511116 MYLK2Q9H1R3 596 aa18.75■□□□□ 0.59
SMAD5-207ENST00000511116 SEMA6AQ9H2E6 1030 aa18.75■□□□□ 0.59
SMAD5-207ENST00000511116 EGLN3Q9H6Z9 239 aa18.75■□□□□ 0.59
SMAD5-207ENST00000511116 IL20Q9NYY1 176 aa18.75■□□□□ 0.59
SMAD5-207ENST00000511116 FAM96BQ9Y3D0 163 aa18.75■□□□□ 0.59
SMAD5-207ENST00000511116 ZNF878C9JN71 531 aa18.74■□□□□ 0.59
SMAD5-207ENST00000511116 TIPRLO75663 272 aa18.74■□□□□ 0.59
SMAD5-207ENST00000511116 RRM2P31350 389 aa18.74■□□□□ 0.59
SMAD5-207ENST00000511116 ENTPD1P49961 510 aa18.74■□□□□ 0.59
SMAD5-207ENST00000511116 HMGA2P52926 109 aa18.74■□□□□ 0.59
SMAD5-207ENST00000511116 GUCA2AQ02747 115 aa18.74■□□□□ 0.59
SMAD5-207ENST00000511116 C2orf68Q2NKX9 166 aa18.74■□□□□ 0.59
SMAD5-207ENST00000511116 DHRS7BQ6IAN0 325 aaPredicted RBP18.74■□□□□ 0.59
SMAD5-207ENST00000511116 SLC16A9Q7RTY1 509 aa18.74■□□□□ 0.59
SMAD5-207ENST00000511116 PRSS45Q7RTY3 260 aa18.74■□□□□ 0.59
SMAD5-207ENST00000511116 SLC36A1Q7Z2H8 476 aa18.74■□□□□ 0.59
SMAD5-207ENST00000511116 CMTM5Q96DZ9 223 aa18.74■□□□□ 0.59
SMAD5-207ENST00000511116 DCTN5Q9BTE1 182 aa18.74■□□□□ 0.59
SMAD5-207ENST00000511116 IL1RAPQ9NPH3 570 aa18.74■□□□□ 0.59
SMAD5-207ENST00000511116 V9GYQ6 96 aa18.74■□□□□ 0.59
SMAD5-207ENST00000511116 ANKRD30BLA7E2S9 258 aa18.73■□□□□ 0.59
SMAD5-207ENST00000511116 GMNNO75496 209 aa18.73■□□□□ 0.59
SMAD5-207ENST00000511116 HSD17B1P14061 328 aa18.73■□□□□ 0.59
SMAD5-207ENST00000511116 TGFBR2P37173 567 aa18.73■□□□□ 0.59
SMAD5-207ENST00000511116 CSNK2BP67870 215 aa18.73■□□□□ 0.59
SMAD5-207ENST00000511116 STUMQ69YW2 141 aa18.73■□□□□ 0.59
SMAD5-207ENST00000511116 C1orf122Q6ZSJ8 110 aa18.73■□□□□ 0.59
SMAD5-207ENST00000511116 DPY19L4Q7Z388 723 aa18.73■□□□□ 0.59
SMAD5-207ENST00000511116 CMTM4Q8IZR5 234 aa18.73■□□□□ 0.59
SMAD5-207ENST00000511116 RNF148Q8N7C7 305 aa18.73■□□□□ 0.59
SMAD5-207ENST00000511116 FAM216BQ8N7L0 139 aa18.73■□□□□ 0.59
SMAD5-207ENST00000511116 SLC37A3Q8NCC5 494 aa18.73■□□□□ 0.59
SMAD5-207ENST00000511116 OR52L1Q8NGH7 329 aa18.73■□□□□ 0.59
SMAD5-207ENST00000511116 OR51L1Q8NGJ5 315 aa18.73■□□□□ 0.59
SMAD5-207ENST00000511116 OR8D4Q8NGM9 314 aa18.73■□□□□ 0.59
SMAD5-207ENST00000511116 OR8S1Q8NH09 359 aa18.73■□□□□ 0.59
SMAD5-207ENST00000511116 DNTTIP1Q9H147 329 aa18.73■□□□□ 0.59
SMAD5-207ENST00000511116 ONECUT1Q9UBC0 465 aa18.73■□□□□ 0.59
SMAD5-207ENST00000511116 MAGEL2Q9UJ55 1249 aa18.73■□□□□ 0.59
SMAD5-207ENST00000511116 ZNF816-ZNF321PA0A0X1KG74 233 aa18.72■□□□□ 0.59
SMAD5-207ENST00000511116 hCG_38984A0A1B0GV85 526 aa18.72■□□□□ 0.59
SMAD5-207ENST00000511116 ACOT8O14734 319 aa18.72■□□□□ 0.59
SMAD5-207ENST00000511116 NPFFO15130 113 aa18.72■□□□□ 0.59
SMAD5-207ENST00000511116 FABP3P05413 133 aa18.72■□□□□ 0.59
SMAD5-207ENST00000511116 PRDX6P30041 224 aa18.72■□□□□ 0.59
SMAD5-207ENST00000511116 KLHL12Q53G59 568 aa18.72■□□□□ 0.59
SMAD5-207ENST00000511116 ZNF770Q6IQ21 691 aaPredicted RBP18.72■□□□□ 0.59
SMAD5-207ENST00000511116 C1QL4Q86Z23 238 aa18.72■□□□□ 0.59
SMAD5-207ENST00000511116 LNX2Q8N448 690 aa18.72■□□□□ 0.59
SMAD5-207ENST00000511116 GALNT4Q8N4A0 578 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms