RNA–Protein interactions for RNA: ENST00000509112.1

CALCOCO2-213, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 459 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-213ENST00000509112 INIPQ9NRY2 104 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 SLC13A4Q9UKG4 626 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 VPREB3Q9UKI3 123 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 KPTNQ9Y664 436 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 USH1CQ9Y6N9 552 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 DYNC2H1Q8NCM8 4307 aaKnown RBP3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 IGHV3OR16-10A0A075B7F0 116 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 IGKV1D-43A0A0B4J1Z2 117 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 A0A1B0GVI7 797 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 TRAPPC13A5PLN9 417 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 BTBD17A6NE02 478 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 SMIM23A6NLE4 172 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 C12orf71A8MTZ7 269 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 IQCF6A8MYZ5 107 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 MCIDASD6RGH6 385 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 SPAG7O75391 227 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 SERPINI2O75830 405 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 NUDT3O95989 172 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 CH25HO95992 272 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 IGHV4-59P01825 116 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 MT-ND1P03886 318 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 THY1P04216 161 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 FBP1P09467 338 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 THRBP10828 461 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 MSR1P21757 451 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 LAP3P28838 519 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 CD200P41217 278 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 GUCA1AP43080 201 aaPredicted RBP3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 PCP4P48539 62 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 POLR2JP52435 117 aaKnown RBP3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 EFNB2P52799 333 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 RAD23AP54725 363 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 EMX1Q04741 257 aaPredicted RBP3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 RPL18Q07020 188 aaKnown RBP3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 COX10Q12887 443 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 STX3Q13277 289 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 SCARB2Q14108 478 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 ENDOGQ14249 297 aaKnown RBP3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 FAM189A2Q15884 450 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 AANATQ16613 207 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 GTDC1Q4AE62 458 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 ENTPD8Q5MY95 495 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 SPATA46Q5T0L3 261 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 METTL11BQ5VVY1 283 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 DHRS7BQ6IAN0 325 aaPredicted RBP3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 Q6ZTK2 550 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 ARMC8Q8IUR7 673 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 SLC30A8Q8IWU4 369 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 C10orf53Q8N6V4 93 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 WFDC9Q8NEX5 89 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 OR4S1Q8NGB4 309 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 OR5L1Q8NGL2 311 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 NFKBIDQ8NI38 313 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 ADAMTS16Q8TE57 1224 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 RASSF5Q8WWW0 418 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 HDAC2Q92769 488 aaKnown RBP3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 MAL2Q969L2 176 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 CMBLQ96DG6 245 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 ZNF583Q96ND8 569 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 RBP7Q96R05 134 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 PRSS27Q9BQR3 290 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 SLC22A4Q9H015 551 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 POLE4Q9NR33 117 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 SLC25A37Q9NYZ2 338 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 ZNRD1Q9P1U0 126 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 ERVK-18Q9QC07 812 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 KAAG1Q9UBP8 84 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 BAG5Q9UL15 447 aa3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 NOP16Q9Y3C1 178 aaKnown RBP3.56□□□□□ -1.84
CALCOCO2-213ENST00000509112 TRAV38-1A0A0B4J264 116 aa3.55□□□□□ -1.84
CALCOCO2-213ENST00000509112 A0A0U1RQK1 487 aa3.55□□□□□ -1.84
CALCOCO2-213ENST00000509112 ZNF816-ZNF321PA0A0X1KG74 233 aa3.55□□□□□ -1.84
CALCOCO2-213ENST00000509112 OR6C6A6NF89 314 aa3.55□□□□□ -1.84
CALCOCO2-213ENST00000509112 FAM90A20PA6NIJ5 464 aa3.55□□□□□ -1.84
CALCOCO2-213ENST00000509112 A6NIZ1 184 aa3.55□□□□□ -1.84
CALCOCO2-213ENST00000509112 EVPLLA8MZ36 301 aa3.55□□□□□ -1.84
CALCOCO2-213ENST00000509112 BLOC1S5-TXNDC5H3BN57 136 aa3.55□□□□□ -1.84
CALCOCO2-213ENST00000509112 LGALS8O00214 317 aa3.55□□□□□ -1.84
CALCOCO2-213ENST00000509112 MLNRO43193 412 aa3.55□□□□□ -1.84
CALCOCO2-213ENST00000509112 SGCEO43556 437 aa3.55□□□□□ -1.84
CALCOCO2-213ENST00000509112 SHOX2O60902 331 aaPredicted RBP3.55□□□□□ -1.84
CALCOCO2-213ENST00000509112 SNNO75324 88 aaPredicted RBP3.55□□□□□ -1.84
CALCOCO2-213ENST00000509112 OR7A10O76100 309 aa3.55□□□□□ -1.84
CALCOCO2-213ENST00000509112 OR5F1O95221 314 aa3.55□□□□□ -1.84
CALCOCO2-213ENST00000509112 SLC2A10O95528 541 aa3.55□□□□□ -1.84
CALCOCO2-213ENST00000509112 CYB5R3P00387 301 aaPredicted RBP3.55□□□□□ -1.84
CALCOCO2-213ENST00000509112 IRF2P14316 349 aa3.55□□□□□ -1.84
CALCOCO2-213ENST00000509112 FUT1P19526 365 aa3.55□□□□□ -1.84
CALCOCO2-213ENST00000509112 BGNP21810 368 aa3.55□□□□□ -1.84
CALCOCO2-213ENST00000509112 CDAP32320 146 aa3.55□□□□□ -1.84
CALCOCO2-213ENST00000509112 GRK5P34947 590 aa3.55□□□□□ -1.84
CALCOCO2-213ENST00000509112 PMELP40967 661 aa3.55□□□□□ -1.84
CALCOCO2-213ENST00000509112 SLC18A1P54219 525 aa3.55□□□□□ -1.84
CALCOCO2-213ENST00000509112 NME5P56597 212 aa3.55□□□□□ -1.84
CALCOCO2-213ENST00000509112 RAP1BP61224 184 aa3.55□□□□□ -1.84
CALCOCO2-213ENST00000509112 RPL27P61353 136 aaKnown RBP3.55□□□□□ -1.84
CALCOCO2-213ENST00000509112 LSM6P62312 80 aaKnown RBP3.55□□□□□ -1.84
CALCOCO2-213ENST00000509112 RAP1AP62834 184 aa3.55□□□□□ -1.84
CALCOCO2-213ENST00000509112 ERVK-25P63136 954 aa3.55□□□□□ -1.84
CALCOCO2-213ENST00000509112 ACSM1Q08AH1 577 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms