RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 AMELYQ99218 206 aa13.51□□□□□ -0.25
LMNA-222ENST00000508500 MRI1Q9BV20 369 aa13.51□□□□□ -0.25
LMNA-222ENST00000508500 PPP1R3EQ9H7J1 279 aa13.51□□□□□ -0.25
LMNA-222ENST00000508500 CENPMQ9NSP4 180 aa13.51□□□□□ -0.25
LMNA-222ENST00000508500 BAIAP2Q9UQB8 552 aa13.51□□□□□ -0.25
LMNA-222ENST00000508500 TRRAPQ9Y4A5 3859 aa13.51□□□□□ -0.25
LMNA-222ENST00000508500 KIR2DS1A0A191URI9 304 aa13.5□□□□□ -0.25
LMNA-222ENST00000508500 DNAJC9-AS1A6NH13 148 aa13.5□□□□□ -0.25
LMNA-222ENST00000508500 G3V2T6 193 aa13.5□□□□□ -0.25
LMNA-222ENST00000508500 SPRY1O43609 319 aaPredicted RBP13.5□□□□□ -0.25
LMNA-222ENST00000508500 PLATP00750 562 aa13.5□□□□□ -0.25
LMNA-222ENST00000508500 PITPNBP48739 271 aa13.5□□□□□ -0.25
LMNA-222ENST00000508500 WDR25Q64LD2 544 aaPredicted RBP13.5□□□□□ -0.25
LMNA-222ENST00000508500 IZUMO2Q6UXV1 221 aa13.5□□□□□ -0.25
LMNA-222ENST00000508500 DCDC5Q6ZRR9 648 aa13.5□□□□□ -0.25
LMNA-222ENST00000508500 ZNF826PQ6ZT77 177 aa13.5□□□□□ -0.25
LMNA-222ENST00000508500 PRSS45Q7RTY3 260 aa13.5□□□□□ -0.25
LMNA-222ENST00000508500 PARP8Q8N3A8 854 aa13.5□□□□□ -0.25
LMNA-222ENST00000508500 OR56B2PQ8NGI1 322 aa13.5□□□□□ -0.25
LMNA-222ENST00000508500 SPSB4Q96A44 273 aa13.5□□□□□ -0.25
LMNA-222ENST00000508500 FEVQ99581 238 aa13.5□□□□□ -0.25
LMNA-222ENST00000508500 COPS4Q9BT78 406 aa13.5□□□□□ -0.25
LMNA-222ENST00000508500 ADAT1Q9BUB4 502 aaKnown RBP13.5□□□□□ -0.25
LMNA-222ENST00000508500 GABARAPL1Q9H0R8 117 aa13.5□□□□□ -0.25
LMNA-222ENST00000508500 Q9H521 79 aa13.5□□□□□ -0.25
LMNA-222ENST00000508500 MARCH7Q9H992 704 aa13.5□□□□□ -0.25
LMNA-222ENST00000508500 CMC2Q9NRP2 79 aa13.5□□□□□ -0.25
LMNA-222ENST00000508500 USE1Q9NZ43 259 aa13.5□□□□□ -0.25
LMNA-222ENST00000508500 ZNF319Q9P2F9 582 aa13.5□□□□□ -0.25
LMNA-222ENST00000508500 RAB26Q9ULW5 256 aa13.5□□□□□ -0.25
LMNA-222ENST00000508500 OAZ3Q9UMX2 235 aa13.5□□□□□ -0.25
LMNA-222ENST00000508500 N6AMT1Q9Y5N5 214 aa13.5□□□□□ -0.25
LMNA-222ENST00000508500 ARRDC5A6NEK1 342 aa13.49□□□□□ -0.25
LMNA-222ENST00000508500 GGT3PA6NGU5 568 aa13.49□□□□□ -0.25
LMNA-222ENST00000508500 C22orf46C9J442 243 aa13.49□□□□□ -0.25
LMNA-222ENST00000508500 ZNF878C9JN71 531 aa13.49□□□□□ -0.25
LMNA-222ENST00000508500 GMDSO60547 372 aa13.49□□□□□ -0.25
LMNA-222ENST00000508500 E2F6O75461 281 aa13.49□□□□□ -0.25
LMNA-222ENST00000508500 PPIAL4GP0DN37 164 aa13.49□□□□□ -0.25
LMNA-222ENST00000508500 PRTN3P24158 256 aa13.49□□□□□ -0.25
LMNA-222ENST00000508500 ALDH3A2P51648 485 aa13.49□□□□□ -0.25
LMNA-222ENST00000508500 AWAT1Q58HT5 328 aa13.49□□□□□ -0.25
LMNA-222ENST00000508500 SFRP4Q6FHJ7 346 aaPredicted RBP13.49□□□□□ -0.25
LMNA-222ENST00000508500 LRRN1Q6UXK5 716 aa13.49□□□□□ -0.25
LMNA-222ENST00000508500 DPY19L4Q7Z388 723 aa13.49□□□□□ -0.25
LMNA-222ENST00000508500 WDR86Q86TI4 376 aa13.49□□□□□ -0.25
LMNA-222ENST00000508500 C11orf53Q8IXP5 236 aa13.49□□□□□ -0.25
LMNA-222ENST00000508500 OR8B3Q8NGG8 313 aa13.49□□□□□ -0.25
LMNA-222ENST00000508500 OR6K6Q8NGW6 343 aa13.49□□□□□ -0.25
LMNA-222ENST00000508500 OR11L1Q8NGX0 322 aa13.49□□□□□ -0.25
LMNA-222ENST00000508500 TAF15Q92804 592 aaKnown RBP eCLIP13.49□□□□□ -0.25
LMNA-222ENST00000508500 SGK3Q96BR1 496 aa13.49□□□□□ -0.25
LMNA-222ENST00000508500 OR8B2Q96RD0 313 aa13.49□□□□□ -0.25
LMNA-222ENST00000508500 CIB1Q99828 191 aa13.49□□□□□ -0.25
LMNA-222ENST00000508500 RBM4BQ9BQ04 359 aaKnown RBP13.49□□□□□ -0.25
LMNA-222ENST00000508500 ABHD6Q9BV23 337 aa13.49□□□□□ -0.25
LMNA-222ENST00000508500 SLC22A4Q9H015 551 aa13.49□□□□□ -0.25
LMNA-222ENST00000508500 MRPL15Q9P015 296 aaKnown RBP13.49□□□□□ -0.25
LMNA-222ENST00000508500 RNF7Q9UBF6 113 aa13.49□□□□□ -0.25
LMNA-222ENST00000508500 IRF2P14316 349 aa13.48□□□□□ -0.25
LMNA-222ENST00000508500 FAM3AP98173 230 aa13.48□□□□□ -0.25
LMNA-222ENST00000508500 EIF2B1Q14232 305 aaKnown RBP13.48□□□□□ -0.25
LMNA-222ENST00000508500 LRRC36Q1X8D7 754 aa13.48□□□□□ -0.25
LMNA-222ENST00000508500 KLHL12Q53G59 568 aa13.48□□□□□ -0.25
LMNA-222ENST00000508500 C9orf139Q6ZV77 190 aa13.48□□□□□ -0.25
LMNA-222ENST00000508500 TIGD4Q8IY51 512 aa13.48□□□□□ -0.25
LMNA-222ENST00000508500 GCSAMQ8N6F7 178 aa13.48□□□□□ -0.25
LMNA-222ENST00000508500 GIPC3Q8TF64 312 aa13.48□□□□□ -0.25
LMNA-222ENST00000508500 PLEKHA8Q96JA3 519 aa13.48□□□□□ -0.25
LMNA-222ENST00000508500 NUDT16L1Q9BRJ7 211 aaKnown RBP13.48□□□□□ -0.25
LMNA-222ENST00000508500 FN3KRPQ9HA64 309 aa13.48□□□□□ -0.25
LMNA-222ENST00000508500 SMURF1Q9HCE7 757 aa13.48□□□□□ -0.25
LMNA-222ENST00000508500 CLN8Q9UBY8 286 aa13.48□□□□□ -0.25
LMNA-222ENST00000508500 CMYA5Q8N3K9 4069 aa13.48□□□□□ -0.25
LMNA-222ENST00000508500 TRAV40A0A0B4J280 105 aa13.47□□□□□ -0.25
LMNA-222ENST00000508500 MDFIC2A0A1B0GVS7 189 aa13.47□□□□□ -0.25
LMNA-222ENST00000508500 SAC3D1A6NKF1 404 aa13.47□□□□□ -0.25
LMNA-222ENST00000508500 RIIAD1A6NNX1 92 aa13.47□□□□□ -0.25
LMNA-222ENST00000508500 C3orf80F5H4A9 247 aa13.47□□□□□ -0.25
LMNA-222ENST00000508500 LGALS8O00214 317 aa13.47□□□□□ -0.25
LMNA-222ENST00000508500 GLCEO94923 617 aa13.47□□□□□ -0.25
LMNA-222ENST00000508500 LHBP01229 141 aa13.47□□□□□ -0.25
LMNA-222ENST00000508500 HKR1P10072 659 aa13.47□□□□□ -0.25
LMNA-222ENST00000508500 GRK5P34947 590 aa13.47□□□□□ -0.25
LMNA-222ENST00000508500 CX3CR1P49238 355 aa13.47□□□□□ -0.25
LMNA-222ENST00000508500 TAF13Q15543 124 aa13.47□□□□□ -0.25
LMNA-222ENST00000508500 BTNL3Q6UXE8 466 aa13.47□□□□□ -0.25
LMNA-222ENST00000508500 SLC16A9Q7RTY1 509 aa13.47□□□□□ -0.25
LMNA-222ENST00000508500 ERI1Q8IV48 349 aaKnown RBP13.47□□□□□ -0.25
LMNA-222ENST00000508500 HS3ST5Q8IZT8 346 aa13.47□□□□□ -0.25
LMNA-222ENST00000508500 CBR4Q8N4T8 237 aa13.47□□□□□ -0.25
LMNA-222ENST00000508500 C3orf56Q8N813 242 aa13.47□□□□□ -0.25
LMNA-222ENST00000508500 BOLLQ8N9W6 283 aaKnown RBP13.47□□□□□ -0.25
LMNA-222ENST00000508500 PLPP7Q8NBV4 271 aa13.47□□□□□ -0.25
LMNA-222ENST00000508500 OR6N2Q8NGY6 317 aa13.47□□□□□ -0.25
LMNA-222ENST00000508500 RNF133Q8WVZ7 376 aa13.47□□□□□ -0.25
LMNA-222ENST00000508500 MS4A7Q9GZW8 240 aaPredicted RBP13.47□□□□□ -0.25
LMNA-222ENST00000508500 C1orf123Q9NWV4 160 aa13.47□□□□□ -0.25
LMNA-222ENST00000508500 PHYHO14832 338 aa13.46□□□□□ -0.25
LMNA-222ENST00000508500 TBX1O43435 398 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms