RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 ZNF529Q6P280 563 aa11.89□□□□□ -0.51
SNCAIP-209ENST00000508017 KLHL24Q6TFL4 600 aa11.89□□□□□ -0.51
SNCAIP-209ENST00000508017 OR5AS1Q8N127 324 aa11.89□□□□□ -0.51
SNCAIP-209ENST00000508017 MAFIPQ8WZ33 124 aa11.89□□□□□ -0.51
SNCAIP-209ENST00000508017 ARHGAP5-AS1Q96IT6 56 aa11.89□□□□□ -0.51
SNCAIP-209ENST00000508017 SLC26A1Q9H2B4 701 aa11.89□□□□□ -0.51
SNCAIP-209ENST00000508017 MMACHCQ9Y4U1 282 aa11.89□□□□□ -0.51
SNCAIP-209ENST00000508017 SHISA8B8ZZ34 492 aa11.89□□□□□ -0.51
SNCAIP-209ENST00000508017 CDC14BO60729 498 aa11.89□□□□□ -0.51
SNCAIP-209ENST00000508017 GLRA1P23415 457 aa11.89□□□□□ -0.51
SNCAIP-209ENST00000508017 CD80P33681 288 aa11.89□□□□□ -0.51
SNCAIP-209ENST00000508017 F2RL1P55085 397 aa11.89□□□□□ -0.51
SNCAIP-209ENST00000508017 SNRPEP62304 92 aaKnown RBP11.89□□□□□ -0.51
SNCAIP-209ENST00000508017 HSF1Q00613 529 aa11.89□□□□□ -0.51
SNCAIP-209ENST00000508017 PEA15Q15121 130 aa11.89□□□□□ -0.51
SNCAIP-209ENST00000508017 POC1AQ8NBT0 407 aa11.89□□□□□ -0.51
SNCAIP-209ENST00000508017 FANCFQ9NPI8 374 aa11.89□□□□□ -0.51
SNCAIP-209ENST00000508017 ANAPC10Q9UM13 185 aa11.89□□□□□ -0.51
SNCAIP-209ENST00000508017 FER1L5A0AVI2 2057 aa11.89□□□□□ -0.51
SNCAIP-209ENST00000508017 HOXB1P14653 301 aaPredicted RBP11.88□□□□□ -0.51
SNCAIP-209ENST00000508017 ZNF20P17024 532 aa11.88□□□□□ -0.51
SNCAIP-209ENST00000508017 GSK3AP49840 483 aa11.88□□□□□ -0.51
SNCAIP-209ENST00000508017 DCAF7P61962 342 aa11.88□□□□□ -0.51
SNCAIP-209ENST00000508017 NSDHLQ15738 373 aa11.88□□□□□ -0.51
SNCAIP-209ENST00000508017 SWI5Q1ZZU3 235 aa11.88□□□□□ -0.51
SNCAIP-209ENST00000508017 AADACL3Q5VUY0 350 aa11.88□□□□□ -0.51
SNCAIP-209ENST00000508017 OR2A2Q6IF42 318 aa11.88□□□□□ -0.51
SNCAIP-209ENST00000508017 NAA40Q86UY6 237 aa11.88□□□□□ -0.51
SNCAIP-209ENST00000508017 COMMD2Q86X83 199 aa11.88□□□□□ -0.51
SNCAIP-209ENST00000508017 OR10H5Q8NGA6 315 aa11.88□□□□□ -0.51
SNCAIP-209ENST00000508017 TAF9BQ9HBM6 251 aa11.88□□□□□ -0.51
SNCAIP-209ENST00000508017 FBLN5Q9UBX5 448 aa11.88□□□□□ -0.51
SNCAIP-209ENST00000508017 CYP8B1Q9UNU6 501 aa11.88□□□□□ -0.51
SNCAIP-209ENST00000508017 PMS2P1A4D2B8 440 aa11.88□□□□□ -0.51
SNCAIP-209ENST00000508017 TO15178 435 aa11.88□□□□□ -0.51
SNCAIP-209ENST00000508017 FBXO24O75426 580 aa11.88□□□□□ -0.51
SNCAIP-209ENST00000508017 SCGNO76038 276 aa11.88□□□□□ -0.51
SNCAIP-209ENST00000508017 CBR1P16152 277 aa11.88□□□□□ -0.51
SNCAIP-209ENST00000508017 DAP3P51398 398 aaKnown RBP11.88□□□□□ -0.51
SNCAIP-209ENST00000508017 BIDP55957 195 aa11.88□□□□□ -0.51
SNCAIP-209ENST00000508017 TLE3Q04726 772 aa11.88□□□□□ -0.51
SNCAIP-209ENST00000508017 RBMS3Q6XE24 437 aaKnown RBP11.88□□□□□ -0.51
SNCAIP-209ENST00000508017 ARRDC1Q8N5I2 433 aa11.88□□□□□ -0.51
SNCAIP-209ENST00000508017 OR5H2Q8NGV7 314 aa11.88□□□□□ -0.51
SNCAIP-209ENST00000508017 NANPQ8TBE9 248 aa11.88□□□□□ -0.51
SNCAIP-209ENST00000508017 SAT2Q96F10 170 aaPredicted RBP11.88□□□□□ -0.51
SNCAIP-209ENST00000508017 C2orf50Q96LR7 162 aa11.88□□□□□ -0.51
SNCAIP-209ENST00000508017 CLCC1Q96S66 551 aa11.88□□□□□ -0.51
SNCAIP-209ENST00000508017 ST6GALNAC5Q9BVH7 336 aa11.88□□□□□ -0.51
SNCAIP-209ENST00000508017 SEC61A2Q9H9S3 476 aa11.88□□□□□ -0.51
SNCAIP-209ENST00000508017 ZNF319Q9P2F9 582 aa11.88□□□□□ -0.51
SNCAIP-209ENST00000508017 SRPK3Q9UPE1 567 aa11.88□□□□□ -0.51
SNCAIP-209ENST00000508017 PIAS3Q9Y6X2 628 aa11.88□□□□□ -0.51
SNCAIP-209ENST00000508017 CFAP54Q96N23 3096 aa11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 EPOPA6NHQ4 379 aa11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 CEACAM18A8MTB9 384 aa11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 IFNA4P05014 189 aa11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 SFTPBP07988 381 aa11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 CHRM2P08172 466 aa11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 FCGR3AP08637 254 aa11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 GSTP1P09211 210 aaKnown RBP11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 RPS2P15880 293 aaKnown RBP11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 AMY2BP19961 511 aa11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 FPR2P25090 351 aa11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 P2RY4P51582 365 aa11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 IL15RAQ13261 267 aa11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 ARFRP1Q13795 201 aa11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 DHRS11Q6UWP2 260 aa11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 H1FNTQ75WM6 255 aaPredicted RBP11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 SLC16A13Q7RTY0 426 aa11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 PEG10Q86TG7 708 aaKnown RBP11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 MISPQ8IVT2 679 aa11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 PNLDC1Q8NA58 520 aaKnown RBP11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 C14orf79Q96F83 325 aa11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 FAM71F1Q96KD3 344 aaPredicted RBP11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 C5orf34Q96MH7 638 aa11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 NUDT16L1Q9BRJ7 211 aaKnown RBP11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 TMEM59Q9BXS4 323 aa11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 PARP12Q9H0J9 701 aaKnown RBP11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 EDARQ9UNE0 448 aa11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 VDAC3Q9Y277 283 aa11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 WIF1Q9Y5W5 379 aa11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 RTTNQ86VV8 2226 aa11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 ASXL3Q9C0F0 2248 aa11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 MYO7BQ6PIF6 2116 aa11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 FAM157AC9JC47 383 aa11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 CRTAPO75718 401 aaPredicted RBP11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 CD5P06127 495 aa11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 HKR1P10072 659 aa11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 S100A12P80511 92 aa11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 SPEM2Q0P670 501 aa11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 KIAA0895LQ68EN5 471 aa11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 BTNL8Q6UX41 500 aa11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 SHISA6Q6ZSJ9 500 aa11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 LANCL3Q6ZV70 420 aa11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 ABHD12BQ7Z5M8 362 aaPredicted RBP11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 LHFPL1Q86WI0 220 aa11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 SKA3Q8IX90 412 aa11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 AKR1E2Q96JD6 320 aa11.87□□□□□ -0.51
SNCAIP-209ENST00000508017 MESP1Q9BRJ9 268 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms