RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 GPER1Q99527 375 aa3.03□□□□□ -1.92
HMGB3P15-201ENST00000507326 KLF6Q99612 283 aaPredicted RBP3.03□□□□□ -1.92
HMGB3P15-201ENST00000507326 DOK1Q99704 481 aa3.03□□□□□ -1.92
HMGB3P15-201ENST00000507326 NKX3-1Q99801 234 aaPredicted RBP3.03□□□□□ -1.92
HMGB3P15-201ENST00000507326 FOXC2Q99958 501 aa3.03□□□□□ -1.92
HMGB3P15-201ENST00000507326 TMEM121Q9BTD3 319 aa3.03□□□□□ -1.92
HMGB3P15-201ENST00000507326 TMEM70Q9BUB7 260 aa3.03□□□□□ -1.92
HMGB3P15-201ENST00000507326 CDCA4Q9BXL8 241 aa3.03□□□□□ -1.92
HMGB3P15-201ENST00000507326 CHIAQ9BZP6 476 aa3.03□□□□□ -1.92
HMGB3P15-201ENST00000507326 Q9HAA7 133 aa3.03□□□□□ -1.92
HMGB3P15-201ENST00000507326 PLAC1Q9HBJ0 212 aa3.03□□□□□ -1.92
HMGB3P15-201ENST00000507326 APOBEC3GQ9HC16 384 aaKnown RBP3.03□□□□□ -1.92
HMGB3P15-201ENST00000507326 KCNJ16Q9NPI9 418 aa3.03□□□□□ -1.92
HMGB3P15-201ENST00000507326 MEPEQ9NQ76 525 aaPredicted RBP3.03□□□□□ -1.92
HMGB3P15-201ENST00000507326 TIGARQ9NQ88 270 aa3.03□□□□□ -1.92
HMGB3P15-201ENST00000507326 DNAJC27Q9NZQ0 273 aa3.03□□□□□ -1.92
HMGB3P15-201ENST00000507326 RWDD2AQ9UIY3 292 aa3.03□□□□□ -1.92
HMGB3P15-201ENST00000507326 CES1P1Q9UKY3 287 aa3.03□□□□□ -1.92
HMGB3P15-201ENST00000507326 AGO1Q9UL18 857 aaKnown RBP3.03□□□□□ -1.92
HMGB3P15-201ENST00000507326 NDRG2Q9UN36 371 aaKnown RBP3.03□□□□□ -1.92
HMGB3P15-201ENST00000507326 ING4Q9UNL4 249 aa3.03□□□□□ -1.92
HMGB3P15-201ENST00000507326 SLC7A11Q9UPY5 501 aa3.03□□□□□ -1.92
HMGB3P15-201ENST00000507326 RAI2Q9Y5P3 530 aa3.03□□□□□ -1.92
HMGB3P15-201ENST00000507326 MRPS18BQ9Y676 258 aaKnown RBP3.03□□□□□ -1.92
HMGB3P15-201ENST00000507326 CAMSAP1Q5T5Y3 1602 aa3.03□□□□□ -1.92
HMGB3P15-201ENST00000507326 PTPN23Q9H3S7 1636 aa3.03□□□□□ -1.92
HMGB3P15-201ENST00000507326 EHBP1L1Q8N3D4 1523 aa3.03□□□□□ -1.92
HMGB3P15-201ENST00000507326 NUP153P49790 1475 aaKnown RBP3.03□□□□□ -1.93
HMGB3P15-201ENST00000507326 MRC2Q9UBG0 1479 aa3.03□□□□□ -1.93
HMGB3P15-201ENST00000507326 SUPT6HQ7KZ85 1726 aaKnown RBP3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 MROH7Q68CQ1 1323 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 MYH10P35580 1976 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 NESP48681 1621 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 MTCL1Q9Y4B5 1905 aaKnown RBP3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 KIR2DL5BA0A0G2JN68 375 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 KIR2DL5BA0A0G2JPC4 375 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 LOC101059948A0A1B0GTJ6 334 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 ZCWPW2A0A1B0GU75 182 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 A0A1B0GUS0 222 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 OR5H15A6NDH6 313 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 B4DXG7 233 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 ANKRD63C9JTQ0 380 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 FCN1O00602 326 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 HSD17B6O14756 317 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 TAAR5O14804 337 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 AZIN1O14977 448 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 MRPS12O15235 138 aaKnown RBP3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 BUB3O43684 328 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 PDE6DO43924 150 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 ZG16O60844 167 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 DUSP11O75319 330 aaKnown RBP3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 UPK1BO75841 260 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 RENP00797 406 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 PTHP01270 115 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 ARG1P05089 322 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 KLK3P07288 261 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 UMODP07911 640 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 RBP1P09455 135 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 SULT1A3P0DMM9 295 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 SULT1A4P0DMN0 295 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 IGHV4-31P0DP07 118 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 AKR1C4P17516 323 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 GM2AP17900 193 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 TCP1P17987 556 aaKnown RBP3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 SDC1P18827 310 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 BCL3P20749 454 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 EFNA1P20827 205 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 AK4P27144 223 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 SAA4P35542 130 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 PDLIM4P50479 330 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 HLCSP50747 726 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 ATP4BP51164 291 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 RORCP51449 518 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 EFNA3P52797 238 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 CRYBA4P53673 196 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 BACE1P56817 501 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 TMEM33P57088 247 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 RAB38P57729 211 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 TAS2R41P59536 307 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 ERVFC1-1P60608 527 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 ABRAXAS2Q15018 415 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 QPRTQ15274 297 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 SNRNP35Q16560 246 aaKnown RBP3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 HLA-DRB5Q30154 266 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 FAM27D1Q5T7N8 215 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 FAM78BQ5VT40 261 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 OTPQ5XKR4 325 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 KRTAP5-1Q6L8H4 278 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 ZNF774Q6NX45 483 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 UGT2A3Q6UWM9 527 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 C4orf22Q6V702 233 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 SLC16A12Q6ZSM3 486 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 Q6ZSR3 168 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 S100A7AQ86SG5 101 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 CATSPER3Q86XQ3 398 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 KIR2DL5AQ8N109 375 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 PGBD5Q8N414 524 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 PRELID2Q8N945 189 aa3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 RELL2Q8NC24 303 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P15-201ENST00000507326 KIR2DL5BQ8NHK3 375 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms