RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 BCL2L10Q9HD36 194 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 ZDHHC18Q9NUE0 388 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 C14orf119Q9NWQ9 140 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 THUMPD1Q9NXG2 353 aaKnown RBP5.68□□□□□ -1.5
VCAN-207ENST00000507162 ASIC5Q9NY37 505 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 HAO2Q9NYQ3 351 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 LINC00527Q9UJ94 153 aa5.68□□□□□ -1.5
VCAN-207ENST00000507162 hCG_1809904A0A1W2PP81 198 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 A0A1W2PPE2 198 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 A0A1W2PR64 198 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 A0A1W2PRV1 198 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 F5H5K5 113 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 H7C1C5 153 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 PTBP3O95758 552 aaKnown RBP5.67□□□□□ -1.5
VCAN-207ENST00000507162 CNTFRP26992 372 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 NAA10P41227 235 aaPredicted RBP5.67□□□□□ -1.5
VCAN-207ENST00000507162 ENTPD1P49961 510 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 INSL3P51460 131 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 SLC25A1P53007 311 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 WDR4P57081 412 aaKnown RBP5.67□□□□□ -1.5
VCAN-207ENST00000507162 RPL27P61353 136 aaKnown RBP5.67□□□□□ -1.5
VCAN-207ENST00000507162 UFM1P61960 85 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 LCN6P62502 163 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 CSNK2BP67870 215 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 HAGHQ16775 308 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 DPY19L1Q2PZI1 675 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 LDLRAD2Q5SZI1 272 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 ZNF613Q6PF04 617 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 CBLL1Q75N03 491 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 CPLX4Q7Z7G2 160 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.67□□□□□ -1.5
VCAN-207ENST00000507162 NAA40Q86UY6 237 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 KRT73Q86Y46 540 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 C11orf53Q8IXP5 236 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 ZNRF1Q8ND25 227 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 TMEM185AQ8NFB2 350 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 OR4Q3Q8NH05 313 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 OR8S1Q8NH09 359 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 OR8U1Q8NH10 309 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 NFKBIDQ8NI38 313 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 FNDC8Q8TC99 324 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 SLC25A33Q9BSK2 321 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 RSRP1Q9BUV0 290 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 SPATA5L1Q9BVQ7 753 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 WDR13Q9H1Z4 485 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 RAD21L1Q9H4I0 556 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 RERGLQ9H628 205 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 DCLRE1BQ9H816 532 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 RNPEPL1Q9HAU8 725 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 C19orf12Q9NSK7 152 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 MRPL15Q9P015 296 aaKnown RBP5.67□□□□□ -1.5
VCAN-207ENST00000507162 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.67□□□□□ -1.5
VCAN-207ENST00000507162 RPS6KA6Q9UK32 745 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 SLC7A7Q9UM01 511 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 POLR1DQ9Y2S0 133 aa5.67□□□□□ -1.5
VCAN-207ENST00000507162 TBL2Q9Y4P3 447 aaKnown RBP5.67□□□□□ -1.5
VCAN-207ENST00000507162 A0A1W2PPH5 198 aa5.66□□□□□ -1.5
VCAN-207ENST00000507162 FAM90A22PA8MWA6 464 aa5.66□□□□□ -1.5
VCAN-207ENST00000507162 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.66□□□□□ -1.5
VCAN-207ENST00000507162 M0R3H8 397 aa5.66□□□□□ -1.5
VCAN-207ENST00000507162 SIGLEC5O15389 551 aa5.66□□□□□ -1.5
VCAN-207ENST00000507162 CHP2O43745 196 aa5.66□□□□□ -1.5
VCAN-207ENST00000507162 OR7A10O76100 309 aa5.66□□□□□ -1.5
VCAN-207ENST00000507162 ACAA1P09110 424 aaPredicted RBP5.66□□□□□ -1.5
VCAN-207ENST00000507162 ALDOCP09972 364 aaKnown RBP5.66□□□□□ -1.5
VCAN-207ENST00000507162 PGA5P0DJD9 388 aa5.66□□□□□ -1.5
VCAN-207ENST00000507162 CTLA4P16410 223 aa5.66□□□□□ -1.5
VCAN-207ENST00000507162 CCL3L1P16619 93 aa5.66□□□□□ -1.5
VCAN-207ENST00000507162 IL12AP29459 219 aa5.66□□□□□ -1.5
VCAN-207ENST00000507162 MTNR1BP49286 362 aa5.66□□□□□ -1.5
VCAN-207ENST00000507162 POU3F4P49335 361 aa5.66□□□□□ -1.5
VCAN-207ENST00000507162 CENPAP49450 140 aa5.66□□□□□ -1.5
VCAN-207ENST00000507162 DYNLT3P51808 116 aa5.66□□□□□ -1.5
VCAN-207ENST00000507162 CAV3P56539 151 aa5.66□□□□□ -1.5
VCAN-207ENST00000507162 CTXN1P60606 82 aa5.66□□□□□ -1.5
VCAN-207ENST00000507162 GNG11P61952 73 aa5.66□□□□□ -1.5
VCAN-207ENST00000507162 AQP6Q13520 282 aa5.66□□□□□ -1.5
VCAN-207ENST00000507162 KIR2DS1Q14954 304 aa5.66□□□□□ -1.5
VCAN-207ENST00000507162 PCLAFQ15004 111 aa5.66□□□□□ -1.5
VCAN-207ENST00000507162 RGNQ15493 299 aa5.66□□□□□ -1.5
VCAN-207ENST00000507162 GTDC1Q4AE62 458 aa5.66□□□□□ -1.5
VCAN-207ENST00000507162 ENTPD8Q5MY95 495 aa5.66□□□□□ -1.5
VCAN-207ENST00000507162 STUMQ69YW2 141 aa5.66□□□□□ -1.5
VCAN-207ENST00000507162 TMEM200BQ69YZ2 307 aa5.66□□□□□ -1.5
VCAN-207ENST00000507162 ZNF788Q6ZQV5 615 aa5.66□□□□□ -1.5
VCAN-207ENST00000507162 C16orf82Q7Z2V1 217 aa5.66□□□□□ -1.5
VCAN-207ENST00000507162 EGFL6Q8IUX8 553 aa5.66□□□□□ -1.5
VCAN-207ENST00000507162 OR4M1Q8NGD0 313 aa5.66□□□□□ -1.5
VCAN-207ENST00000507162 OR13D1Q8NGV5 346 aa5.66□□□□□ -1.5
VCAN-207ENST00000507162 OR5K1Q8NHB7 308 aa5.66□□□□□ -1.5
VCAN-207ENST00000507162 NDNFQ8TB73 568 aa5.66□□□□□ -1.5
VCAN-207ENST00000507162 ST6GALNAC6Q969X2 333 aa5.66□□□□□ -1.5
VCAN-207ENST00000507162 C12orf43Q96C57 262 aaKnown RBP5.66□□□□□ -1.5
VCAN-207ENST00000507162 FAM110AQ9BQ89 295 aa5.66□□□□□ -1.5
VCAN-207ENST00000507162 RETNQ9HD89 108 aa5.66□□□□□ -1.5
VCAN-207ENST00000507162 SRRM2Q9UQ35 2752 aaKnown RBP5.66□□□□□ -1.5
VCAN-207ENST00000507162 PKHD1P08F94 4074 aa5.65□□□□□ -1.5
VCAN-207ENST00000507162 hCG_2014768A0A024R1R8 64 aa5.65□□□□□ -1.5
VCAN-207ENST00000507162 PRORSD1PA6NEY8 169 aa5.65□□□□□ -1.5
VCAN-207ENST00000507162 BHLHE40O14503 412 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms