RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 LRRC30A6NM36 301 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 MYL12BO14950 172 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 SERPINA3P01011 423 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 MT-ND2P03891 347 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 CD2P06729 351 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 HEXAP06865 529 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 MRPL3P09001 348 aaKnown RBP7.22□□□□□ -1.25
PDGFC-205ENST00000506880 ACAA1P09110 424 aaPredicted RBP7.22□□□□□ -1.25
PDGFC-205ENST00000506880 GNAO1P09471 354 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 LIMS3P0CW19 117 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 LIMS4P0CW20 117 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 CCL2P13500 99 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 GALP22466 123 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 CRHBPP24387 322 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 MAPK3P27361 379 aaPredicted RBP7.22□□□□□ -1.25
PDGFC-205ENST00000506880 GNALP38405 381 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 CRYBB2P43320 205 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 GSK3AP49840 483 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 PDLIM4P50479 330 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 PRKXP51817 358 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 WNT4P56705 351 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 FAM3AP98173 230 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 ZNF92Q03936 586 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 ALKBH1Q13686 389 aaKnown RBP7.22□□□□□ -1.25
PDGFC-205ENST00000506880 TBCEQ15813 527 aaPredicted RBP7.22□□□□□ -1.25
PDGFC-205ENST00000506880 KCNJ8Q15842 424 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 KCTD21Q4G0X4 260 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 FAM76BQ5HYJ3 339 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 C6orf52Q5T4I8 152 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 DMRTA1Q5VZB9 504 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 TMEM42Q69YG0 159 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 FAM57BQ71RH2 274 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 PEG10Q86TG7 708 aaKnown RBP7.22□□□□□ -1.25
PDGFC-205ENST00000506880 CDH26Q8IXH8 852 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 DNAAF1Q8NEP3 725 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 SEMA6DQ8NFY4 1073 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 OR8B12Q8NGG6 310 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 OR2G2Q8NGZ5 317 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 CNIH3Q8TBE1 160 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 UBASH3BQ8TF42 649 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 HTRA1Q92743 480 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 RORBQ92753 470 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 GGHQ92820 318 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 UBE2FQ969M7 185 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 SGK3Q96BR1 496 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 PELI1Q96FA3 418 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 DMRTB1Q96MA1 342 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 SIGLEC11Q96RL6 698 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 AMELYQ99218 206 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 SAP30LQ9HAJ7 183 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 DECR2Q9NUI1 292 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 BABAM2Q9NXR7 383 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 ENPP5Q9UJA9 477 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 GNG8Q9UK08 70 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 HHLA2Q9UM44 414 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 PLEKHA6Q9Y2H5 1048 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 V9GYS6 101 aa7.22□□□□□ -1.25
PDGFC-205ENST00000506880 DYSFO75923 2080 aa7.21□□□□□ -1.25
PDGFC-205ENST00000506880 MAP1AP78559 2803 aaPredicted RBP7.21□□□□□ -1.25
PDGFC-205ENST00000506880 TRIM64A6NGJ6 449 aa7.21□□□□□ -1.26
PDGFC-205ENST00000506880 M0R129 80 aa7.21□□□□□ -1.26
PDGFC-205ENST00000506880 OGG1O15527 345 aa7.21□□□□□ -1.26
PDGFC-205ENST00000506880 RGS10O43665 173 aa7.21□□□□□ -1.26
PDGFC-205ENST00000506880 NDUFA2O43678 99 aa7.21□□□□□ -1.26
PDGFC-205ENST00000506880 PLPP2O43688 288 aa7.21□□□□□ -1.26
PDGFC-205ENST00000506880 TTRP02766 147 aa7.21□□□□□ -1.26
PDGFC-205ENST00000506880 PSKH1P11801 424 aa7.21□□□□□ -1.26
PDGFC-205ENST00000506880 RPS27P42677 84 aaKnown RBP7.21□□□□□ -1.26
PDGFC-205ENST00000506880 SNAI3Q3KNW1 292 aa7.21□□□□□ -1.26
PDGFC-205ENST00000506880 YIF1BQ5BJH7 314 aa7.21□□□□□ -1.26
PDGFC-205ENST00000506880 CLVS2Q5SYC1 327 aa7.21□□□□□ -1.26
PDGFC-205ENST00000506880 GLYATL3Q5SZD4 288 aa7.21□□□□□ -1.26
PDGFC-205ENST00000506880 VHLLQ6RSH7 139 aa7.21□□□□□ -1.26
PDGFC-205ENST00000506880 BCDIN3DQ7Z5W3 292 aaKnown RBP7.21□□□□□ -1.26
PDGFC-205ENST00000506880 NANOGP1Q8N7R0 232 aa7.21□□□□□ -1.26
PDGFC-205ENST00000506880 ZNF485Q8NCK3 441 aa7.21□□□□□ -1.26
PDGFC-205ENST00000506880 OR5A2Q8NGI9 324 aa7.21□□□□□ -1.26
PDGFC-205ENST00000506880 OR10Z1Q8NGY1 313 aa7.21□□□□□ -1.26
PDGFC-205ENST00000506880 SLC7A6Q92536 515 aa7.21□□□□□ -1.26
PDGFC-205ENST00000506880 NEUROG1Q92886 237 aa7.21□□□□□ -1.26
PDGFC-205ENST00000506880 SPSB1Q96BD6 273 aa7.21□□□□□ -1.26
PDGFC-205ENST00000506880 SMIM19Q96E16 107 aa7.21□□□□□ -1.26
PDGFC-205ENST00000506880 TIMD4Q96H15 378 aa7.21□□□□□ -1.26
PDGFC-205ENST00000506880 POM121Q96HA1 1249 aa7.21□□□□□ -1.26
PDGFC-205ENST00000506880 C4orf36Q96KX1 117 aa7.21□□□□□ -1.26
PDGFC-205ENST00000506880 HIST1H2AAQ96QV6 131 aa7.21□□□□□ -1.26
PDGFC-205ENST00000506880 MICU1Q9BPX6 476 aa7.21□□□□□ -1.26
PDGFC-205ENST00000506880 RHNO1Q9BSD3 238 aa7.21□□□□□ -1.26
PDGFC-205ENST00000506880 RTL8AQ9BWD3 113 aa7.21□□□□□ -1.26
PDGFC-205ENST00000506880 TLNRD1Q9H1K6 362 aa7.21□□□□□ -1.26
PDGFC-205ENST00000506880 SEBOXQ9HB31 216 aaPredicted RBP7.21□□□□□ -1.26
PDGFC-205ENST00000506880 LRCH1Q9Y2L9 728 aa7.21□□□□□ -1.26
PDGFC-205ENST00000506880 KLHDC2Q9Y2U9 406 aa7.21□□□□□ -1.26
PDGFC-205ENST00000506880 IGHV1-69-2A0A0G2JMI3 117 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 OR4C45A6NMZ5 311 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 TBX1O43435 398 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 SYT7O43581 403 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 GPX5O75715 221 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 TNFAIP8O95379 198 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 CLIC3O95833 236 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms