RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 VANGL2Q9ULK5 521 aa3.93□□□□□ -1.78
HERC4-213ENST00000506515 SPG11Q96JI7 2443 aa3.93□□□□□ -1.78
HERC4-213ENST00000506515 CELSR1Q9NYQ6 3014 aa3.92□□□□□ -1.78
HERC4-213ENST00000506515 SEC16AO15027 2179 aa3.92□□□□□ -1.78
HERC4-213ENST00000506515 A0A0U1RQS6 177 aa3.92□□□□□ -1.78
HERC4-213ENST00000506515 XKRY2A2RUG3 117 aa3.92□□□□□ -1.78
HERC4-213ENST00000506515 M0QYV0 167 aa3.92□□□□□ -1.78
HERC4-213ENST00000506515 RAD51BO15315 384 aa3.92□□□□□ -1.78
HERC4-213ENST00000506515 IGLV3-25P01717 112 aa3.92□□□□□ -1.78
HERC4-213ENST00000506515 KRT6AP02538 564 aa3.92□□□□□ -1.78
HERC4-213ENST00000506515 FGF1P05230 155 aa3.92□□□□□ -1.78
HERC4-213ENST00000506515 CTSLP07711 333 aa3.92□□□□□ -1.78
HERC4-213ENST00000506515 COX6B1P14854 86 aa3.92□□□□□ -1.78
HERC4-213ENST00000506515 MGMTP16455 207 aa3.92□□□□□ -1.78
HERC4-213ENST00000506515 TEAD1P28347 426 aa3.92□□□□□ -1.78
HERC4-213ENST00000506515 RORAP35398 523 aa3.92□□□□□ -1.78
HERC4-213ENST00000506515 SLC26A3P40879 764 aa3.92□□□□□ -1.78
HERC4-213ENST00000506515 RPS10P46783 165 aaKnown RBP3.92□□□□□ -1.78
HERC4-213ENST00000506515 YAP1P46937 504 aaKnown RBP3.92□□□□□ -1.78
HERC4-213ENST00000506515 GNA12Q03113 381 aa3.92□□□□□ -1.78
HERC4-213ENST00000506515 EIF4EBP2Q13542 120 aaPredicted RBP3.92□□□□□ -1.78
HERC4-213ENST00000506515 MPPED2Q15777 294 aa3.92□□□□□ -1.78
HERC4-213ENST00000506515 CCDC183Q5T5S1 534 aa3.92□□□□□ -1.78
HERC4-213ENST00000506515 IGFL3Q6UXB1 125 aa3.92□□□□□ -1.78
HERC4-213ENST00000506515 COX15Q7KZN9 410 aa3.92□□□□□ -1.78
HERC4-213ENST00000506515 CDH26Q8IXH8 852 aa3.92□□□□□ -1.78
HERC4-213ENST00000506515 CCDC54Q8NEL0 328 aa3.92□□□□□ -1.78
HERC4-213ENST00000506515 OR4F15Q8NGB8 312 aa3.92□□□□□ -1.78
HERC4-213ENST00000506515 STMN2Q93045 179 aa3.92□□□□□ -1.78
HERC4-213ENST00000506515 UCK1Q9HA47 277 aa3.92□□□□□ -1.78
HERC4-213ENST00000506515 RMND1Q9NWS8 449 aa3.92□□□□□ -1.78
HERC4-213ENST00000506515 SLC2A8Q9NY64 477 aa3.92□□□□□ -1.78
HERC4-213ENST00000506515 SLC25A37Q9NYZ2 338 aa3.92□□□□□ -1.78
HERC4-213ENST00000506515 SPATA7Q9P0W8 599 aa3.92□□□□□ -1.78
HERC4-213ENST00000506515 NUFIP1Q9UHK0 495 aaKnown RBP3.92□□□□□ -1.78
HERC4-213ENST00000506515 FARSAQ9Y285 508 aaKnown RBP3.92□□□□□ -1.78
HERC4-213ENST00000506515 HEBP2Q9Y5Z4 205 aa3.92□□□□□ -1.78
HERC4-213ENST00000506515 TACC2O95359 2948 aa3.92□□□□□ -1.78
HERC4-213ENST00000506515 OTOGQ6ZRI0 2925 aa3.92□□□□□ -1.78
HERC4-213ENST00000506515 MYO7BQ6PIF6 2116 aa3.92□□□□□ -1.78
HERC4-213ENST00000506515 SPENQ96T58 3664 aaKnown RBP3.92□□□□□ -1.78
HERC4-213ENST00000506515 CNTRLQ7Z7A1 2325 aa3.92□□□□□ -1.78
HERC4-213ENST00000506515 CHD5Q8TDI0 1954 aa3.91□□□□□ -1.78
HERC4-213ENST00000506515 ZGRF1Q86YA3 2104 aa3.91□□□□□ -1.78
HERC4-213ENST00000506515 PKDREJQ9NTG1 2253 aa3.91□□□□□ -1.78
HERC4-213ENST00000506515 PSMD11O00231 422 aa3.91□□□□□ -1.78
HERC4-213ENST00000506515 CCL21O00585 134 aa3.91□□□□□ -1.78
HERC4-213ENST00000506515 KDELR3O43731 214 aa3.91□□□□□ -1.78
HERC4-213ENST00000506515 MGRN1O60291 552 aa3.91□□□□□ -1.78
HERC4-213ENST00000506515 YEATS4O95619 227 aa3.91□□□□□ -1.78
HERC4-213ENST00000506515 FGFR1OPO95684 399 aaKnown RBP3.91□□□□□ -1.78
HERC4-213ENST00000506515 IGHV2-5P01817 119 aa3.91□□□□□ -1.78
HERC4-213ENST00000506515 SERPIND1P05546 499 aa3.91□□□□□ -1.78
HERC4-213ENST00000506515 IVLP07476 585 aa3.91□□□□□ -1.78
HERC4-213ENST00000506515 PLEKP08567 350 aaPredicted RBP3.91□□□□□ -1.78
HERC4-213ENST00000506515 CRISP2P16562 243 aa3.91□□□□□ -1.78
HERC4-213ENST00000506515 KITLGP21583 273 aa3.91□□□□□ -1.78
HERC4-213ENST00000506515 MDKP21741 143 aaPredicted RBP3.91□□□□□ -1.78
HERC4-213ENST00000506515 VHLP40337 213 aa3.91□□□□□ -1.78
HERC4-213ENST00000506515 UQCRFS1P47985 274 aa3.91□□□□□ -1.78
HERC4-213ENST00000506515 NPBWR2P48146 333 aa3.91□□□□□ -1.78
HERC4-213ENST00000506515 CSNK1DP48730 415 aa3.91□□□□□ -1.78
HERC4-213ENST00000506515 KCNJ2P63252 427 aa3.91□□□□□ -1.78
HERC4-213ENST00000506515 SRSF6Q13247 344 aaKnown RBP3.91□□□□□ -1.78
HERC4-213ENST00000506515 IRF4Q15306 451 aa3.91□□□□□ -1.78
HERC4-213ENST00000506515 ZNF658BQ4V348 819 aaPredicted RBP3.91□□□□□ -1.78
HERC4-213ENST00000506515 SYPL2Q5VXT5 272 aa3.91□□□□□ -1.78
HERC4-213ENST00000506515 FRMPD2BQ6IN97 320 aa3.91□□□□□ -1.78
HERC4-213ENST00000506515 TAC4Q86UU9 113 aa3.91□□□□□ -1.78
HERC4-213ENST00000506515 RAB43Q86YS6 212 aa3.91□□□□□ -1.78
HERC4-213ENST00000506515 PUSL1Q8N0Z8 303 aaKnown RBP3.91□□□□□ -1.78
HERC4-213ENST00000506515 BBS5Q8N3I7 341 aa3.91□□□□□ -1.78
HERC4-213ENST00000506515 CYYR1Q96J86 154 aa3.91□□□□□ -1.78
HERC4-213ENST00000506515 ILKAPQ9H0C8 392 aaPredicted RBP3.91□□□□□ -1.78
HERC4-213ENST00000506515 LHX9Q9NQ69 397 aa3.91□□□□□ -1.78
HERC4-213ENST00000506515 ZNF331Q9NQX6 463 aaPredicted RBP3.91□□□□□ -1.78
HERC4-213ENST00000506515 EXD2Q9NVH0 621 aa3.91□□□□□ -1.78
HERC4-213ENST00000506515 TRAPPC4Q9Y296 219 aa3.91□□□□□ -1.78
HERC4-213ENST00000506515 PDZD2O15018 2839 aa3.91□□□□□ -1.78
HERC4-213ENST00000506515 CSMD1Q96PZ7 3565 aa3.91□□□□□ -1.78
HERC4-213ENST00000506515 HIVEP1P15822 2718 aa3.9□□□□□ -1.78
HERC4-213ENST00000506515 TRIM64CA6NLI5 447 aa3.9□□□□□ -1.79
HERC4-213ENST00000506515 GOSR2O14653 212 aa3.9□□□□□ -1.79
HERC4-213ENST00000506515 C2P06681 752 aa3.9□□□□□ -1.79
HERC4-213ENST00000506515 GKN3PP0CG01 181 aa3.9□□□□□ -1.79
HERC4-213ENST00000506515 CD99P14209 185 aa3.9□□□□□ -1.79
HERC4-213ENST00000506515 CRYBB2P43320 205 aa3.9□□□□□ -1.79
HERC4-213ENST00000506515 GPR6P46095 362 aaPredicted RBP3.9□□□□□ -1.79
HERC4-213ENST00000506515 PLP1P60201 277 aa3.9□□□□□ -1.79
HERC4-213ENST00000506515 RHOAP61586 193 aa3.9□□□□□ -1.79
HERC4-213ENST00000506515 PSG5Q15238 335 aa3.9□□□□□ -1.79
HERC4-213ENST00000506515 TGFBIQ15582 683 aa3.9□□□□□ -1.79
HERC4-213ENST00000506515 RFX4Q33E94 735 aa3.9□□□□□ -1.79
HERC4-213ENST00000506515 KRTAP5-1Q6L8H4 278 aa3.9□□□□□ -1.79
HERC4-213ENST00000506515 RNASEKQ6P5S7 137 aaKnown RBP3.9□□□□□ -1.79
HERC4-213ENST00000506515 IGFL2Q6UWQ7 119 aa3.9□□□□□ -1.79
HERC4-213ENST00000506515 ZNF621Q6ZSS3 439 aa3.9□□□□□ -1.79
HERC4-213ENST00000506515 DEFB106AQ8N104 65 aa3.9□□□□□ -1.79
HERC4-213ENST00000506515 ZNF433Q8N7K0 673 aaPredicted RBP3.9□□□□□ -1.79
HERC4-213ENST00000506515 ARIH2OSQ8N7S6 290 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms