RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 GYPAP02724 150 aa11.95□□□□□ -0.5
CDC42SE2-209ENST00000506419 ANXA2P07355 339 aaKnown RBP11.95□□□□□ -0.5
CDC42SE2-209ENST00000506419 ZNF3P17036 446 aa11.95□□□□□ -0.5
CDC42SE2-209ENST00000506419 POU1F1P28069 291 aa11.95□□□□□ -0.5
CDC42SE2-209ENST00000506419 DDOSTP39656 456 aa11.95□□□□□ -0.5
CDC42SE2-209ENST00000506419 OPRL1P41146 370 aa11.95□□□□□ -0.5
CDC42SE2-209ENST00000506419 SLC15A1P46059 708 aa11.95□□□□□ -0.5
CDC42SE2-209ENST00000506419 GRB2P62993 217 aaKnown RBP11.95□□□□□ -0.5
CDC42SE2-209ENST00000506419 CDK5Q00535 292 aa11.95□□□□□ -0.5
CDC42SE2-209ENST00000506419 FAM57BQ71RH2 274 aa11.95□□□□□ -0.5
CDC42SE2-209ENST00000506419 AQP12AQ8IXF9 295 aa11.95□□□□□ -0.5
CDC42SE2-209ENST00000506419 OR6N2Q8NGY6 317 aa11.95□□□□□ -0.5
CDC42SE2-209ENST00000506419 TEX47Q8TBZ9 253 aa11.95□□□□□ -0.5
CDC42SE2-209ENST00000506419 ZMYND19Q96E35 227 aaPredicted RBP11.95□□□□□ -0.5
CDC42SE2-209ENST00000506419 REEP6Q96HR9 211 aa11.95□□□□□ -0.5
CDC42SE2-209ENST00000506419 TOR3AQ9H497 397 aa11.95□□□□□ -0.5
CDC42SE2-209ENST00000506419 SMURF1Q9HCE7 757 aa11.95□□□□□ -0.5
CDC42SE2-209ENST00000506419 DNAJC27Q9NZQ0 273 aa11.95□□□□□ -0.5
CDC42SE2-209ENST00000506419 NOP16Q9Y3C1 178 aaKnown RBP11.95□□□□□ -0.5
CDC42SE2-209ENST00000506419 ARRDC5A6NEK1 342 aa11.94□□□□□ -0.5
CDC42SE2-209ENST00000506419 OOEPA6NGQ2 149 aa11.94□□□□□ -0.5
CDC42SE2-209ENST00000506419 ADAM20O43506 726 aa11.94□□□□□ -0.5
CDC42SE2-209ENST00000506419 XRCC2O43543 280 aa11.94□□□□□ -0.5
CDC42SE2-209ENST00000506419 GSK3AP49840 483 aa11.94□□□□□ -0.5
CDC42SE2-209ENST00000506419 ZNF121P58317 390 aaPredicted RBP11.94□□□□□ -0.5
CDC42SE2-209ENST00000506419 GK3PQ14409 553 aa11.94□□□□□ -0.5
CDC42SE2-209ENST00000506419 OR8B8Q15620 311 aa11.94□□□□□ -0.5
CDC42SE2-209ENST00000506419 PLBD1Q6P4A8 553 aa11.94□□□□□ -0.5
CDC42SE2-209ENST00000506419 BRD3OSQ6XYD6 125 aa11.94□□□□□ -0.5
CDC42SE2-209ENST00000506419 SHFQ7M4L6 423 aa11.94□□□□□ -0.5
CDC42SE2-209ENST00000506419 FAM90A1Q86YD7 464 aa11.94□□□□□ -0.5
CDC42SE2-209ENST00000506419 FGFRL1Q8N441 504 aa11.94□□□□□ -0.5
CDC42SE2-209ENST00000506419 SEH1LQ96EE3 360 aa11.94□□□□□ -0.5
CDC42SE2-209ENST00000506419 PRDM13Q9H4Q3 707 aa11.94□□□□□ -0.5
CDC42SE2-209ENST00000506419 BRD7Q9NPI1 651 aa11.94□□□□□ -0.5
CDC42SE2-209ENST00000506419 ERVK-18Q9QC07 812 aa11.94□□□□□ -0.5
CDC42SE2-209ENST00000506419 RHBDD3Q9Y3P4 386 aa11.94□□□□□ -0.5
CDC42SE2-209ENST00000506419 PCDHGB1Q9Y5G3 927 aa11.94□□□□□ -0.5
CDC42SE2-209ENST00000506419 PKD1L1Q8TDX9 2849 aa11.94□□□□□ -0.5
CDC42SE2-209ENST00000506419 IGHV3OR15-7A0A075B7D8 119 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 TRAV38-1A0A0B4J264 116 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 TRAV40A0A0B4J280 105 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 hCG_38984A0A1B0GV85 526 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 A0A1B0GW55 424 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 ANKRD30BLA7E2S9 258 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 GNGT2O14610 69 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 SELENOFO60613 162 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 SFTPBP07988 381 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 RNASE1P07998 156 aaKnown RBP11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 DUX4L2P0CJ85 424 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 DUX4L3P0CJ86 424 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 DUX4L4P0CJ87 422 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 DUX4L5P0CJ88 424 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 DUX4L6P0CJ89 424 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 DUX4L7P0CJ90 424 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 OSMP13725 252 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 MMP9P14780 707 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 HSD11B1P28845 292 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 HCCSP53701 268 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 TIGD6Q17RP2 521 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 DEFB112Q30KQ8 113 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 TEX36Q5VZQ5 186 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 TMEM236Q5W0B7 351 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 DUX4L9Q6RFH8 374 aaPredicted RBP11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 RHOUQ7L0Q8 258 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 CPOQ8IVL8 374 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 BBS1Q8NFJ9 593 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 OR1M1Q8NGA1 313 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 THEM6Q8WUY1 208 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 SLC7A6OSQ96CW6 309 aaPredicted RBP11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 LYZL4Q96KX0 146 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 TECTBQ96PL2 329 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 TBX15Q96SF7 602 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 ZNF747Q9BV97 191 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 MMADHCQ9H3L0 296 aaPredicted RBP11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 OPA3Q9H6K4 179 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 C14orf119Q9NWQ9 140 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 FAM53CQ9NYF3 392 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 DUX4Q9UBX2 424 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 KLHDC2Q9Y2U9 406 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 MGAM2Q2M2H8 2515 aa11.93□□□□□ -0.5
CDC42SE2-209ENST00000506419 A6NLC8 198 aa11.92□□□□□ -0.5
CDC42SE2-209ENST00000506419 ZNF879B4DU55 563 aa11.92□□□□□ -0.5
CDC42SE2-209ENST00000506419 PRR23D1E9PI22 279 aaPredicted RBP11.92□□□□□ -0.5
CDC42SE2-209ENST00000506419 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.92□□□□□ -0.5
CDC42SE2-209ENST00000506419 CLDN34H7C241 214 aa11.92□□□□□ -0.5
CDC42SE2-209ENST00000506419 NDUFA2O43678 99 aa11.92□□□□□ -0.5
CDC42SE2-209ENST00000506419 HMGN1P05114 100 aa11.92□□□□□ -0.5
CDC42SE2-209ENST00000506419 H2BFMP0C1H6 154 aa11.92□□□□□ -0.5
CDC42SE2-209ENST00000506419 PRR23D2P0DMB1 279 aaPredicted RBP11.92□□□□□ -0.5
CDC42SE2-209ENST00000506419 AMY2BP19961 511 aa11.92□□□□□ -0.5
CDC42SE2-209ENST00000506419 ACKR3P25106 362 aa11.92□□□□□ -0.5
CDC42SE2-209ENST00000506419 CFHR2P36980 270 aa11.92□□□□□ -0.5
CDC42SE2-209ENST00000506419 MTNR1AP48039 350 aa11.92□□□□□ -0.5
CDC42SE2-209ENST00000506419 NPY4RP50391 375 aa11.92□□□□□ -0.5
CDC42SE2-209ENST00000506419 CSNK2BP67870 215 aa11.92□□□□□ -0.5
CDC42SE2-209ENST00000506419 FOXL1Q12952 345 aa11.92□□□□□ -0.5
CDC42SE2-209ENST00000506419 KCNJ8Q15842 424 aa11.92□□□□□ -0.5
CDC42SE2-209ENST00000506419 CD276Q5ZPR3 534 aa11.92□□□□□ -0.5
CDC42SE2-209ENST00000506419 RUSC1-AS1Q66K80 236 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms