RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 CPSF4O95639 269 aaKnown RBP1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 IGKV1-39P01597 117 aa1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 IGKV1D-39P04432 117 aa1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 USF1P22415 310 aaPredicted RBP1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 TNNT2P45379 298 aaPredicted RBP1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 KLF3P57682 345 aaPredicted RBP1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 ZNF121P58317 390 aaPredicted RBP1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 ZNF829Q3KNS6 432 aaPredicted RBP1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 ZNF678Q5SXM1 525 aa1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 CPTPQ5TA50 214 aa1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 ORMDL3Q8N138 153 aa1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 SLC25A29Q8N8R3 303 aa1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 NECAB1Q8N987 351 aa1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 OR5K2Q8NHB8 316 aa1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 LYPD6BQ8NI32 183 aa1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 ENKURQ8TC29 256 aa1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 SLC2A14Q8TDB8 520 aa1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 RSPH1Q8WYR4 309 aa1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 RERGQ96A58 199 aaPredicted RBP1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 S100PBPQ96BU1 408 aa1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 OTUB2Q96DC9 234 aa1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 BTN2A3PQ96KV6 586 aa1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 TOLLIPQ9H0E2 274 aa1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 RBFOX1Q9NWB1 397 aaKnown RBP1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 SLC17A4Q9Y2C5 497 aa1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 COL22A1Q8NFW1 1626 aaPredicted RBP1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 CCL15-CCL14A0A0B4J2E2 113 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 IGKV1-6A0A0C4DH72 117 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 RAD1O60671 282 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 CCDC22O60826 627 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 SCO1O75880 301 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 IGHV1-46P01743 117 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 IGHG2P01859 326 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 IFI30P13284 250 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 HTR1DP28221 377 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 PPP1R7Q15435 360 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 CCL15Q16663 113 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 PDZD11Q5EBL8 140 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 LDLRAD2Q5SZI1 272 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 C22orf42Q6IC83 251 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 SPNS3Q6ZMD2 512 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 Q6ZSR6 202 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 CDH26Q8IXH8 852 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 OR4A4PQ8NGN8 299 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 FBXO32Q969P5 355 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 DYNLL2Q96FJ2 89 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 CENPKQ9BS16 269 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 VSIRQ9H7M9 311 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 CA10Q9NS85 328 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 CLN8Q9UBY8 286 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 HMGXB4Q9UGU5 601 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 HMCN1Q96RW7 5635 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 VWDEQ8N2E2 1590 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 LOXHD1Q8IVV2 1947 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 TRBV9A0A0B4J1U6 114 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 A6NDN8 102 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 A8MWL6 223 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 CENPBD1B2RD01 187 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 NME4O00746 187 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 CPLX1O14810 134 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 HPRT1P00492 218 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 NRASP01111 189 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 HRASP01112 189 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 KRASP01116 189 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 IGKV1-16P04430 117 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 CBR1P16152 277 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 RAB4AP20338 218 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 PFN2P35080 140 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 RAB10P61026 200 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 IL5RAQ01344 420 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 IFITM3Q01628 133 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 OR7G2Q8NG99 324 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 OR10W1Q8NGF6 305 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 DCAKDQ8WVC6 231 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 SGTBQ96EQ0 304 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 PDCD1LG2Q9BQ51 273 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 MS4A8Q9BY19 250 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 ANKRA2Q9H9E1 313 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 ACP6Q9NPH0 428 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 LTBP2Q14767 1821 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 BRCA1P38398 1863 aaKnown RBP0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 GOLGA6L4A6NEF3 574 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 AP3B1O00203 1094 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 NDUFAB1O14561 156 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 DNALI1O14645 258 aaPredicted RBP0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 LSM8O95777 96 aaKnown RBP0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 MAS1P04201 325 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 THRAP10827 490 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 PBLDP30039 288 aaPredicted RBP0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 RRM2P31350 389 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 MYCNOSP40205 109 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 PPICP45877 212 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 FMODQ06828 376 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 NAB1Q13506 487 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 ZNF181Q2M3W8 571 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 C6orf99Q4VX62 202 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 PCOTHQ58A44 107 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 XKR7Q5GH72 579 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 TBC1D21Q8IYX1 336 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 ARL6IP6Q8N6S5 226 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms