RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 CPSF4O95639 269 aaKnown RBP1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 IGKV1-39P01597 117 aa1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 IGKV1D-39P04432 117 aa1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 USF1P22415 310 aaPredicted RBP1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 TNNT2P45379 298 aaPredicted RBP1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 KLF3P57682 345 aaPredicted RBP1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 ZNF121P58317 390 aaPredicted RBP1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 ZNF829Q3KNS6 432 aaPredicted RBP1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 ZNF678Q5SXM1 525 aa1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 CPTPQ5TA50 214 aa1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 ORMDL3Q8N138 153 aa1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 SLC25A29Q8N8R3 303 aa1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 NECAB1Q8N987 351 aa1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 OR5K2Q8NHB8 316 aa1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 LYPD6BQ8NI32 183 aa1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 ENKURQ8TC29 256 aa1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 SLC2A14Q8TDB8 520 aa1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 RSPH1Q8WYR4 309 aa1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 RERGQ96A58 199 aaPredicted RBP1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 S100PBPQ96BU1 408 aa1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 OTUB2Q96DC9 234 aa1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 BTN2A3PQ96KV6 586 aa1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 TOLLIPQ9H0E2 274 aa1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 RBFOX1Q9NWB1 397 aaKnown RBP1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 SLC17A4Q9Y2C5 497 aa1.02□□□□□ -2.25
HMGB1P29-201ENST00000505659 COL22A1Q8NFW1 1626 aaPredicted RBP1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 CCL15-CCL14A0A0B4J2E2 113 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 IGKV1-6A0A0C4DH72 117 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 RAD1O60671 282 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 CCDC22O60826 627 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 SCO1O75880 301 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 IGHV1-46P01743 117 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 IGHG2P01859 326 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 IFI30P13284 250 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 HTR1DP28221 377 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 PPP1R7Q15435 360 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 CCL15Q16663 113 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 PDZD11Q5EBL8 140 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 LDLRAD2Q5SZI1 272 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 C22orf42Q6IC83 251 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 SPNS3Q6ZMD2 512 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 Q6ZSR6 202 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 CDH26Q8IXH8 852 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 OR4A4PQ8NGN8 299 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 FBXO32Q969P5 355 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 DYNLL2Q96FJ2 89 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 CENPKQ9BS16 269 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 VSIRQ9H7M9 311 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 CA10Q9NS85 328 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 CLN8Q9UBY8 286 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 HMGXB4Q9UGU5 601 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 HMCN1Q96RW7 5635 aa1.01□□□□□ -2.25
HMGB1P29-201ENST00000505659 VWDEQ8N2E2 1590 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 LOXHD1Q8IVV2 1947 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 TRBV9A0A0B4J1U6 114 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 A6NDN8 102 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 A8MWL6 223 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 CENPBD1B2RD01 187 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 NME4O00746 187 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 CPLX1O14810 134 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 HPRT1P00492 218 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 NRASP01111 189 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 HRASP01112 189 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 KRASP01116 189 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 IGKV1-16P04430 117 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 CBR1P16152 277 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 RAB4AP20338 218 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 PFN2P35080 140 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 RAB10P61026 200 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 IL5RAQ01344 420 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 IFITM3Q01628 133 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 OR7G2Q8NG99 324 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 OR10W1Q8NGF6 305 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 DCAKDQ8WVC6 231 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 SGTBQ96EQ0 304 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 PDCD1LG2Q9BQ51 273 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 MS4A8Q9BY19 250 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 ANKRA2Q9H9E1 313 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 ACP6Q9NPH0 428 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 LTBP2Q14767 1821 aa1□□□□□ -2.25
HMGB1P29-201ENST00000505659 BRCA1P38398 1863 aaKnown RBP0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 GOLGA6L4A6NEF3 574 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 AP3B1O00203 1094 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 NDUFAB1O14561 156 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 DNALI1O14645 258 aaPredicted RBP0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 LSM8O95777 96 aaKnown RBP0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 MAS1P04201 325 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 THRAP10827 490 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 PBLDP30039 288 aaPredicted RBP0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 RRM2P31350 389 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 MYCNOSP40205 109 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 PPICP45877 212 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 FMODQ06828 376 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 NAB1Q13506 487 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 ZNF181Q2M3W8 571 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 C6orf99Q4VX62 202 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 PCOTHQ58A44 107 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 XKR7Q5GH72 579 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 TBC1D21Q8IYX1 336 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 ARL6IP6Q8N6S5 226 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms