RNA–Protein interactions for RNA: ENST00000504627.1

SQSTM1-209, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-209ENST00000504627 ENDOGQ14249 297 aaKnown RBP15.35■□□□□ 0.05
SQSTM1-209ENST00000504627 PCGF3Q3KNV8 242 aa15.35■□□□□ 0.05
SQSTM1-209ENST00000504627 ZNF718Q3SXZ3 478 aa15.35■□□□□ 0.05
SQSTM1-209ENST00000504627 ARMCX4Q5H9R4 360 aa15.35■□□□□ 0.05
SQSTM1-209ENST00000504627 OTPQ5XKR4 325 aa15.35■□□□□ 0.05
SQSTM1-209ENST00000504627 RHOUQ7L0Q8 258 aa15.35■□□□□ 0.05
SQSTM1-209ENST00000504627 DCXRQ7Z4W1 244 aa15.35■□□□□ 0.05
SQSTM1-209ENST00000504627 SYT9Q86SS6 491 aa15.35■□□□□ 0.05
SQSTM1-209ENST00000504627 LINC00346Q8IVM7 164 aa15.35■□□□□ 0.05
SQSTM1-209ENST00000504627 THEM6Q8WUY1 208 aa15.35■□□□□ 0.05
SQSTM1-209ENST00000504627 POM121L2Q96KW2 1035 aa15.35■□□□□ 0.05
SQSTM1-209ENST00000504627 OPALINQ96PE5 141 aa15.35■□□□□ 0.05
SQSTM1-209ENST00000504627 TTTY10Q9BZA0 68 aa15.35■□□□□ 0.05
SQSTM1-209ENST00000504627 DECR2Q9NUI1 292 aa15.35■□□□□ 0.05
SQSTM1-209ENST00000504627 NDUFA13Q9P0J0 144 aa15.35■□□□□ 0.05
SQSTM1-209ENST00000504627 ASH2LQ9UBL3 628 aa15.35■□□□□ 0.05
SQSTM1-209ENST00000504627 TIMM10BQ9Y5J6 103 aa15.35■□□□□ 0.05
SQSTM1-209ENST00000504627 DPPA5A6NC42 116 aa15.34■□□□□ 0.05
SQSTM1-209ENST00000504627 METTL15A6NJ78 407 aa15.34■□□□□ 0.05
SQSTM1-209ENST00000504627 B4DSR2 109 aa15.34■□□□□ 0.05
SQSTM1-209ENST00000504627 CDC14BO60729 498 aa15.34■□□□□ 0.05
SQSTM1-209ENST00000504627 ZNF254O75437 659 aa15.34■□□□□ 0.05
SQSTM1-209ENST00000504627 HSMCR30P0CW71 290 aa15.34■□□□□ 0.05
SQSTM1-209ENST00000504627 THBS2P35442 1172 aa15.34■□□□□ 0.05
SQSTM1-209ENST00000504627 SRP14P37108 136 aaKnown RBP15.34■□□□□ 0.05
SQSTM1-209ENST00000504627 OR12D2P58182 307 aa15.34■□□□□ 0.05
SQSTM1-209ENST00000504627 SCRN3Q0VDG4 424 aa15.34■□□□□ 0.05
SQSTM1-209ENST00000504627 DOC2BQ14184 412 aa15.34■□□□□ 0.05
SQSTM1-209ENST00000504627 TP53I3Q53FA7 332 aa15.34■□□□□ 0.05
SQSTM1-209ENST00000504627 SPATA46Q5T0L3 261 aa15.34■□□□□ 0.05
SQSTM1-209ENST00000504627 DEGS2Q6QHC5 323 aa15.34■□□□□ 0.05
SQSTM1-209ENST00000504627 VASH1Q7L8A9 365 aaPredicted RBP15.34■□□□□ 0.05
SQSTM1-209ENST00000504627 PHC2Q8IXK0 858 aa15.34■□□□□ 0.05
SQSTM1-209ENST00000504627 ZNF679Q8IYX0 411 aa15.34■□□□□ 0.05
SQSTM1-209ENST00000504627 CLDND2Q8NHS1 167 aa15.34■□□□□ 0.05
SQSTM1-209ENST00000504627 RNF133Q8WVZ7 376 aa15.34■□□□□ 0.05
SQSTM1-209ENST00000504627 GATAD2BQ8WXI9 593 aa15.34■□□□□ 0.05
SQSTM1-209ENST00000504627 UFD1Q92890 307 aa15.34■□□□□ 0.05
SQSTM1-209ENST00000504627 YIPF5Q969M3 257 aa15.34■□□□□ 0.05
SQSTM1-209ENST00000504627 AMELYQ99218 206 aa15.34■□□□□ 0.05
SQSTM1-209ENST00000504627 REPIN1Q9BWE0 567 aaKnown RBP15.34■□□□□ 0.05
SQSTM1-209ENST00000504627 MROQ9BYG7 248 aa15.34■□□□□ 0.05
SQSTM1-209ENST00000504627 OR2H1Q9GZK4 316 aa15.34■□□□□ 0.05
SQSTM1-209ENST00000504627 ISG20L2Q9H9L3 353 aaKnown RBP15.34■□□□□ 0.05
SQSTM1-209ENST00000504627 ACOXLQ9NUZ1 547 aa15.34■□□□□ 0.05
SQSTM1-209ENST00000504627 BABAM2Q9NXR7 383 aa15.34■□□□□ 0.05
SQSTM1-209ENST00000504627 MRM2Q9UI43 246 aaKnown RBP15.34■□□□□ 0.05
SQSTM1-209ENST00000504627 GNG8Q9UK08 70 aa15.34■□□□□ 0.05
SQSTM1-209ENST00000504627 IKZF2Q9UKS7 526 aa15.34■□□□□ 0.05
SQSTM1-209ENST00000504627 STAB1Q9NY15 2570 aa15.33■□□□□ 0.05
SQSTM1-209ENST00000504627 LOC100509620A0A075B734 347 aa15.33■□□□□ 0.04
SQSTM1-209ENST00000504627 A6NHS1 94 aa15.33■□□□□ 0.04
SQSTM1-209ENST00000504627 ZNF878C9JN71 531 aa15.33■□□□□ 0.04
SQSTM1-209ENST00000504627 J3QLW9 94 aa15.33■□□□□ 0.04
SQSTM1-209ENST00000504627 CCRL2O00421 344 aa15.33■□□□□ 0.04
SQSTM1-209ENST00000504627 ZNF19P17023 458 aa15.33■□□□□ 0.04
SQSTM1-209ENST00000504627 GBX2P52951 348 aaPredicted RBP15.33■□□□□ 0.04
SQSTM1-209ENST00000504627 HIST1H3AP68431 136 aa15.33■□□□□ 0.04
SQSTM1-209ENST00000504627 TSTQ16762 297 aaKnown RBP15.33■□□□□ 0.04
SQSTM1-209ENST00000504627 HIST2H3PS2Q5TEC6 136 aa15.33■□□□□ 0.04
SQSTM1-209ENST00000504627 CFAP77Q6ZQR2 320 aa15.33■□□□□ 0.04
SQSTM1-209ENST00000504627 HIST2H3AQ71DI3 136 aa15.33■□□□□ 0.04
SQSTM1-209ENST00000504627 KLBQ86Z14 1044 aa15.33■□□□□ 0.04
SQSTM1-209ENST00000504627 ZNF101Q8IZC7 436 aa15.33■□□□□ 0.04
SQSTM1-209ENST00000504627 GJC3Q8NFK1 279 aa15.33■□□□□ 0.04
SQSTM1-209ENST00000504627 TMIGD2Q96BF3 282 aa15.33■□□□□ 0.04
SQSTM1-209ENST00000504627 PELI1Q96FA3 418 aa15.33■□□□□ 0.04
SQSTM1-209ENST00000504627 MAP6Q96JE9 813 aa15.33■□□□□ 0.04
SQSTM1-209ENST00000504627 FAM192AQ9GZU8 254 aa15.33■□□□□ 0.04
SQSTM1-209ENST00000504627 WNT5BQ9H1J7 359 aa15.33■□□□□ 0.04
SQSTM1-209ENST00000504627 PLSCR5A0PG75 271 aa15.32■□□□□ 0.04
SQSTM1-209ENST00000504627 LALBAP00709 142 aa15.32■□□□□ 0.04
SQSTM1-209ENST00000504627 IGHV3-13P01766 116 aa15.32■□□□□ 0.04
SQSTM1-209ENST00000504627 CPEP16870 476 aa15.32■□□□□ 0.04
SQSTM1-209ENST00000504627 TGFBR2P37173 567 aa15.32■□□□□ 0.04
SQSTM1-209ENST00000504627 LIPAP38571 399 aa15.32■□□□□ 0.04
SQSTM1-209ENST00000504627 OPRL1P41146 370 aa15.32■□□□□ 0.04
SQSTM1-209ENST00000504627 WNT5AP41221 380 aa15.32■□□□□ 0.04
SQSTM1-209ENST00000504627 TGM4P49221 684 aa15.32■□□□□ 0.04
SQSTM1-209ENST00000504627 ZNF81P51508 661 aa15.32■□□□□ 0.04
SQSTM1-209ENST00000504627 RIDAP52758 137 aaKnown RBP15.32■□□□□ 0.04
SQSTM1-209ENST00000504627 DVL1P1P54792 670 aaPredicted RBP15.32■□□□□ 0.04
SQSTM1-209ENST00000504627 TPBGQ13641 420 aa15.32■□□□□ 0.04
SQSTM1-209ENST00000504627 CCDC58Q4VC31 144 aa15.32■□□□□ 0.04
SQSTM1-209ENST00000504627 ZNF774Q6NX45 483 aa15.32■□□□□ 0.04
SQSTM1-209ENST00000504627 CORO6Q6QEF8 472 aa15.32■□□□□ 0.04
SQSTM1-209ENST00000504627 ARL9Q6T311 187 aa15.32■□□□□ 0.04
SQSTM1-209ENST00000504627 KRT77Q7Z794 578 aa15.32■□□□□ 0.04
SQSTM1-209ENST00000504627 GLCCI1Q86VQ1 547 aa15.32■□□□□ 0.04
SQSTM1-209ENST00000504627 C1orf174Q8IYL3 243 aa15.32■□□□□ 0.04
SQSTM1-209ENST00000504627 YIPF7Q8N8F6 280 aa15.32■□□□□ 0.04
SQSTM1-209ENST00000504627 ABHD4Q8TB40 342 aa15.32■□□□□ 0.04
SQSTM1-209ENST00000504627 SLC25A40Q8TBP6 338 aa15.32■□□□□ 0.04
SQSTM1-209ENST00000504627 SLAMF6Q96DU3 332 aa15.32■□□□□ 0.04
SQSTM1-209ENST00000504627 YIPF6Q96EC8 236 aa15.32■□□□□ 0.04
SQSTM1-209ENST00000504627 C1orf159Q96HA4 380 aa15.32■□□□□ 0.04
SQSTM1-209ENST00000504627 RBM38Q9H0Z9 239 aaKnown RBP15.32■□□□□ 0.04
SQSTM1-209ENST00000504627 PNRC2Q9NPJ4 139 aaKnown RBP15.32■□□□□ 0.04
SQSTM1-209ENST00000504627 DDX28Q9NUL7 540 aaKnown RBP15.32■□□□□ 0.04
SQSTM1-209ENST00000504627 NDUFB11Q9NX14 153 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms