RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 GGT3PA6NGU5 568 aa8.57□□□□□ -1.04
NUP54-203ENST00000504173 M0R233 179 aa8.57□□□□□ -1.04
NUP54-203ENST00000504173 SPRY1O43609 319 aaPredicted RBP8.57□□□□□ -1.04
NUP54-203ENST00000504173 CD8AP01732 235 aa8.57□□□□□ -1.04
NUP54-203ENST00000504173 IGHV3-13P01766 116 aa8.57□□□□□ -1.04
NUP54-203ENST00000504173 MT-ND2P03891 347 aa8.57□□□□□ -1.04
NUP54-203ENST00000504173 ALDH3B1P43353 468 aa8.57□□□□□ -1.04
NUP54-203ENST00000504173 PRSS12P56730 875 aa8.57□□□□□ -1.04
NUP54-203ENST00000504173 GABARAPL2P60520 117 aa8.57□□□□□ -1.04
NUP54-203ENST00000504173 SWI5Q1ZZU3 235 aa8.57□□□□□ -1.04
NUP54-203ENST00000504173 MST1LQ2TV78 715 aa8.57□□□□□ -1.04
NUP54-203ENST00000504173 TMEM255AQ5JRV8 349 aa8.57□□□□□ -1.04
NUP54-203ENST00000504173 WDR38Q5JTN6 314 aa8.57□□□□□ -1.04
NUP54-203ENST00000504173 OR2T2Q6IF00 324 aa8.57□□□□□ -1.04
NUP54-203ENST00000504173 C11orf71Q6IPW1 123 aa8.57□□□□□ -1.04
NUP54-203ENST00000504173 PRSS48Q7RTY5 328 aa8.57□□□□□ -1.04
NUP54-203ENST00000504173 CATSPERDQ86XM0 798 aa8.57□□□□□ -1.04
NUP54-203ENST00000504173 OR5AS1Q8N127 324 aa8.57□□□□□ -1.04
NUP54-203ENST00000504173 OR2G2Q8NGZ5 317 aa8.57□□□□□ -1.04
NUP54-203ENST00000504173 HAVCR2Q8TDQ0 301 aa8.57□□□□□ -1.04
NUP54-203ENST00000504173 GATAD2BQ8WXI9 593 aa8.57□□□□□ -1.04
NUP54-203ENST00000504173 PIGTQ969N2 578 aa8.57□□□□□ -1.04
NUP54-203ENST00000504173 PPP1R14AQ96A00 147 aa8.57□□□□□ -1.04
NUP54-203ENST00000504173 SPSB4Q96A44 273 aa8.57□□□□□ -1.04
NUP54-203ENST00000504173 SGK3Q96BR1 496 aa8.57□□□□□ -1.04
NUP54-203ENST00000504173 HAVCR1Q96D42 359 aa8.57□□□□□ -1.04
NUP54-203ENST00000504173 MND1Q9BWT6 205 aa8.57□□□□□ -1.04
NUP54-203ENST00000504173 CDCA4Q9BXL8 241 aa8.57□□□□□ -1.04
NUP54-203ENST00000504173 CACNG6Q9BXT2 260 aa8.57□□□□□ -1.04
NUP54-203ENST00000504173 YTHDF1Q9BYJ9 559 aaKnown RBP8.57□□□□□ -1.04
NUP54-203ENST00000504173 CXorf56Q9H5V9 222 aa8.57□□□□□ -1.04
NUP54-203ENST00000504173 G6PC2Q9NQR9 355 aa8.57□□□□□ -1.04
NUP54-203ENST00000504173 GPR84Q9NQS5 396 aa8.57□□□□□ -1.04
NUP54-203ENST00000504173 FBXO9Q9UK97 447 aaPredicted RBP8.57□□□□□ -1.04
NUP54-203ENST00000504173 SLC22A13Q9Y226 551 aa8.57□□□□□ -1.04
NUP54-203ENST00000504173 LRCH1Q9Y2L9 728 aa8.57□□□□□ -1.04
NUP54-203ENST00000504173 PMF1-BGLAPU3KQ54 211 aa8.57□□□□□ -1.04
NUP54-203ENST00000504173 NBEAL2Q6ZNJ1 2754 aa8.56□□□□□ -1.04
NUP54-203ENST00000504173 hCG_38984A0A1B0GV85 526 aa8.56□□□□□ -1.04
NUP54-203ENST00000504173 PLSCR5A0PG75 271 aa8.56□□□□□ -1.04
NUP54-203ENST00000504173 CD300LBA8K4G0 201 aa8.56□□□□□ -1.04
NUP54-203ENST00000504173 E9PI62 339 aa8.56□□□□□ -1.04
NUP54-203ENST00000504173 P2RY10O00398 339 aa8.56□□□□□ -1.04
NUP54-203ENST00000504173 PHF1O43189 567 aaPredicted RBP8.56□□□□□ -1.04
NUP54-203ENST00000504173 TTRP02766 147 aa8.56□□□□□ -1.04
NUP54-203ENST00000504173 CD53P19397 219 aa8.56□□□□□ -1.04
NUP54-203ENST00000504173 KITLGP21583 273 aa8.56□□□□□ -1.04
NUP54-203ENST00000504173 CDKN1AP38936 164 aa8.56□□□□□ -1.04
NUP54-203ENST00000504173 TGM4P49221 684 aa8.56□□□□□ -1.04
NUP54-203ENST00000504173 WNT4P56705 351 aa8.56□□□□□ -1.04
NUP54-203ENST00000504173 ALKBH1Q13686 389 aaKnown RBP8.56□□□□□ -1.04
NUP54-203ENST00000504173 ODF4Q2M2E3 257 aa8.56□□□□□ -1.04
NUP54-203ENST00000504173 ZMAT1Q5H9K5 638 aa8.56□□□□□ -1.04
NUP54-203ENST00000504173 RNLSQ5VYX0 342 aa8.56□□□□□ -1.04
NUP54-203ENST00000504173 FDX2Q6P4F2 183 aa8.56□□□□□ -1.04
NUP54-203ENST00000504173 KLBQ86Z14 1044 aa8.56□□□□□ -1.04
NUP54-203ENST00000504173 ELMOD2Q8IZ81 293 aa8.56□□□□□ -1.04
NUP54-203ENST00000504173 PRSS35Q8N3Z0 413 aa8.56□□□□□ -1.04
NUP54-203ENST00000504173 NANOGP1Q8N7R0 232 aa8.56□□□□□ -1.04
NUP54-203ENST00000504173 OR56B2PQ8NGI1 322 aa8.56□□□□□ -1.04
NUP54-203ENST00000504173 OR51E1Q8TCB6 317 aa8.56□□□□□ -1.04
NUP54-203ENST00000504173 RNF166Q96A37 237 aaPredicted RBP8.56□□□□□ -1.04
NUP54-203ENST00000504173 FAM71F1Q96KD3 344 aaPredicted RBP8.56□□□□□ -1.04
NUP54-203ENST00000504173 LYZL4Q96KX0 146 aa8.56□□□□□ -1.04
NUP54-203ENST00000504173 VRK1Q99986 396 aaPredicted RBP8.56□□□□□ -1.04
NUP54-203ENST00000504173 TRIM36Q9NQ86 728 aa8.56□□□□□ -1.04
NUP54-203ENST00000504173 BABAM2Q9NXR7 383 aa8.56□□□□□ -1.04
NUP54-203ENST00000504173 CGGBP1Q9UFW8 167 aaPredicted RBP8.56□□□□□ -1.04
NUP54-203ENST00000504173 ZNF391Q9UJN7 358 aa8.56□□□□□ -1.04
NUP54-203ENST00000504173 ZNF281Q9Y2X9 895 aa8.56□□□□□ -1.04
NUP54-203ENST00000504173 A0A1B0GVI7 797 aa8.55□□□□□ -1.04
NUP54-203ENST00000504173 IQCF6A8MYZ5 107 aa8.55□□□□□ -1.04
NUP54-203ENST00000504173 MTRF1O75570 445 aaKnown RBP8.55□□□□□ -1.04
NUP54-203ENST00000504173 UBCP0CG48 685 aaKnown RBP8.55□□□□□ -1.04
NUP54-203ENST00000504173 NAT2P11245 290 aa8.55□□□□□ -1.04
NUP54-203ENST00000504173 LIPAP38571 399 aa8.55□□□□□ -1.04
NUP54-203ENST00000504173 KIR3DL2P43630 455 aa8.55□□□□□ -1.04
NUP54-203ENST00000504173 GSK3AP49840 483 aa8.55□□□□□ -1.04
NUP54-203ENST00000504173 PPOXP50336 477 aa8.55□□□□□ -1.04
NUP54-203ENST00000504173 ZNF81P51508 661 aa8.55□□□□□ -1.04
NUP54-203ENST00000504173 CCR9P51686 369 aa8.55□□□□□ -1.04
NUP54-203ENST00000504173 GTF2A1P52655 376 aaPredicted RBP8.55□□□□□ -1.04
NUP54-203ENST00000504173 CHN2P52757 468 aa8.55□□□□□ -1.04
NUP54-203ENST00000504173 NANOS3P60323 173 aaKnown RBP8.55□□□□□ -1.04
NUP54-203ENST00000504173 FAM3AP98173 230 aa8.55□□□□□ -1.04
NUP54-203ENST00000504173 IRF3Q14653 427 aa8.55□□□□□ -1.04
NUP54-203ENST00000504173 MED22Q15528 200 aa8.55□□□□□ -1.04
NUP54-203ENST00000504173 CCDC58Q4VC31 144 aa8.55□□□□□ -1.04
NUP54-203ENST00000504173 Q5PR19 223 aa8.55□□□□□ -1.04
NUP54-203ENST00000504173 TMEM244Q5VVB8 128 aa8.55□□□□□ -1.04
NUP54-203ENST00000504173 RPL22L1Q6P5R6 122 aaKnown RBP8.55□□□□□ -1.04
NUP54-203ENST00000504173 BHLHE23Q8NDY6 225 aa8.55□□□□□ -1.04
NUP54-203ENST00000504173 OR8G5Q8NG78 346 aa8.55□□□□□ -1.04
NUP54-203ENST00000504173 IGFBPL1Q8WX77 278 aa8.55□□□□□ -1.04
NUP54-203ENST00000504173 GTF3AQ92664 365 aaKnown RBP8.55□□□□□ -1.04
NUP54-203ENST00000504173 TPK1Q9H3S4 243 aa8.55□□□□□ -1.04
NUP54-203ENST00000504173 MS4A5Q9H3V2 200 aa8.55□□□□□ -1.04
NUP54-203ENST00000504173 MSL2Q9HCI7 577 aa8.55□□□□□ -1.04
NUP54-203ENST00000504173 CYSLTR2Q9NS75 346 aa8.55□□□□□ -1.04
NUP54-203ENST00000504173 FRRS1LQ9P0K9 344 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms