RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 CLN8Q9UBY8 286 aa13.52□□□□□ -0.25
SCLT1-204ENST00000503215 IGHV3OR15-7A0A075B7D8 119 aa13.51□□□□□ -0.25
SCLT1-204ENST00000503215 TRAV40A0A0B4J280 105 aa13.51□□□□□ -0.25
SCLT1-204ENST00000503215 H3BN98 237 aa13.51□□□□□ -0.25
SCLT1-204ENST00000503215 LGALS8O00214 317 aa13.51□□□□□ -0.25
SCLT1-204ENST00000503215 TBX1O43435 398 aa13.51□□□□□ -0.25
SCLT1-204ENST00000503215 PLATP00750 562 aa13.51□□□□□ -0.25
SCLT1-204ENST00000503215 ANXA2P07355 339 aaKnown RBP13.51□□□□□ -0.25
SCLT1-204ENST00000503215 ZNF3P17036 446 aa13.51□□□□□ -0.25
SCLT1-204ENST00000503215 PRKACGP22612 351 aa13.51□□□□□ -0.25
SCLT1-204ENST00000503215 CPT2P23786 658 aa13.51□□□□□ -0.25
SCLT1-204ENST00000503215 PRTN3P24158 256 aa13.51□□□□□ -0.25
SCLT1-204ENST00000503215 GRK5P34947 590 aa13.51□□□□□ -0.25
SCLT1-204ENST00000503215 FGF12P61328 243 aa13.51□□□□□ -0.25
SCLT1-204ENST00000503215 FAM3AP98173 230 aa13.51□□□□□ -0.25
SCLT1-204ENST00000503215 BAMBIQ13145 260 aa13.51□□□□□ -0.25
SCLT1-204ENST00000503215 BRD3OSQ6XYD6 125 aa13.51□□□□□ -0.25
SCLT1-204ENST00000503215 FAM57BQ71RH2 274 aa13.51□□□□□ -0.25
SCLT1-204ENST00000503215 SLC16A9Q7RTY1 509 aa13.51□□□□□ -0.25
SCLT1-204ENST00000503215 TIGD4Q8IY51 512 aa13.51□□□□□ -0.25
SCLT1-204ENST00000503215 TEX47Q8TBZ9 253 aa13.51□□□□□ -0.25
SCLT1-204ENST00000503215 RNF133Q8WVZ7 376 aa13.51□□□□□ -0.25
SCLT1-204ENST00000503215 ZMYND19Q96E35 227 aaPredicted RBP13.51□□□□□ -0.25
SCLT1-204ENST00000503215 INTS14Q96SY0 518 aa13.51□□□□□ -0.25
SCLT1-204ENST00000503215 SLC22A4Q9H015 551 aa13.51□□□□□ -0.25
SCLT1-204ENST00000503215 MMADHCQ9H3L0 296 aaPredicted RBP13.51□□□□□ -0.25
SCLT1-204ENST00000503215 SMURF1Q9HCE7 757 aa13.51□□□□□ -0.25
SCLT1-204ENST00000503215 BRD7Q9NPI1 651 aa13.51□□□□□ -0.25
SCLT1-204ENST00000503215 PDP1Q9P0J1 537 aaPredicted RBP13.51□□□□□ -0.25
SCLT1-204ENST00000503215 A6NLC8 198 aa13.5□□□□□ -0.25
SCLT1-204ENST00000503215 SELENOFO60613 162 aa13.5□□□□□ -0.25
SCLT1-204ENST00000503215 GYPAP02724 150 aa13.5□□□□□ -0.25
SCLT1-204ENST00000503215 SFTPBP07988 381 aa13.5□□□□□ -0.25
SCLT1-204ENST00000503215 ZNF121P58317 390 aaPredicted RBP13.5□□□□□ -0.25
SCLT1-204ENST00000503215 GINS1Q14691 196 aa13.5□□□□□ -0.25
SCLT1-204ENST00000503215 SLC9A3R2Q15599 337 aa13.5□□□□□ -0.25
SCLT1-204ENST00000503215 OR8B8Q15620 311 aa13.5□□□□□ -0.25
SCLT1-204ENST00000503215 PLBD1Q6P4A8 553 aa13.5□□□□□ -0.25
SCLT1-204ENST00000503215 FGFRL1Q8N441 504 aa13.5□□□□□ -0.25
SCLT1-204ENST00000503215 GCSAMQ8N6F7 178 aa13.5□□□□□ -0.25
SCLT1-204ENST00000503215 SEH1LQ96EE3 360 aa13.5□□□□□ -0.25
SCLT1-204ENST00000503215 REEP6Q96HR9 211 aa13.5□□□□□ -0.25
SCLT1-204ENST00000503215 MARCH7Q9H992 704 aa13.5□□□□□ -0.25
SCLT1-204ENST00000503215 KLHDC2Q9Y2U9 406 aa13.5□□□□□ -0.25
SCLT1-204ENST00000503215 PCDHGB1Q9Y5G3 927 aa13.5□□□□□ -0.25
SCLT1-204ENST00000503215 A0A1B0GW55 424 aa13.49□□□□□ -0.25
SCLT1-204ENST00000503215 A6NHS1 94 aa13.49□□□□□ -0.25
SCLT1-204ENST00000503215 PHYHO14832 338 aa13.49□□□□□ -0.25
SCLT1-204ENST00000503215 ADAM20O43506 726 aa13.49□□□□□ -0.25
SCLT1-204ENST00000503215 GLCEO94923 617 aa13.49□□□□□ -0.25
SCLT1-204ENST00000503215 LHBP01229 141 aa13.49□□□□□ -0.25
SCLT1-204ENST00000503215 DUX4L2P0CJ85 424 aa13.49□□□□□ -0.25
SCLT1-204ENST00000503215 DUX4L3P0CJ86 424 aa13.49□□□□□ -0.25
SCLT1-204ENST00000503215 DUX4L4P0CJ87 422 aa13.49□□□□□ -0.25
SCLT1-204ENST00000503215 DUX4L5P0CJ88 424 aa13.49□□□□□ -0.25
SCLT1-204ENST00000503215 DUX4L6P0CJ89 424 aa13.49□□□□□ -0.25
SCLT1-204ENST00000503215 DUX4L7P0CJ90 424 aa13.49□□□□□ -0.25
SCLT1-204ENST00000503215 PPIAL4GP0DN37 164 aa13.49□□□□□ -0.25
SCLT1-204ENST00000503215 HKR1P10072 659 aa13.49□□□□□ -0.25
SCLT1-204ENST00000503215 OPRL1P41146 370 aa13.49□□□□□ -0.25
SCLT1-204ENST00000503215 GRB2P62993 217 aaKnown RBP13.49□□□□□ -0.25
SCLT1-204ENST00000503215 CSNK2BP67870 215 aa13.49□□□□□ -0.25
SCLT1-204ENST00000503215 TMEM236Q5W0B7 351 aa13.49□□□□□ -0.25
SCLT1-204ENST00000503215 DUX4L9Q6RFH8 374 aaPredicted RBP13.49□□□□□ -0.25
SCLT1-204ENST00000503215 ASRGL1Q7L266 308 aa13.49□□□□□ -0.25
SCLT1-204ENST00000503215 FAM90A1Q86YD7 464 aa13.49□□□□□ -0.25
SCLT1-204ENST00000503215 PLPP7Q8NBV4 271 aa13.49□□□□□ -0.25
SCLT1-204ENST00000503215 BBS1Q8NFJ9 593 aa13.49□□□□□ -0.25
SCLT1-204ENST00000503215 TECTBQ96PL2 329 aa13.49□□□□□ -0.25
SCLT1-204ENST00000503215 C1orf21Q9H246 121 aa13.49□□□□□ -0.25
SCLT1-204ENST00000503215 DUX4Q9UBX2 424 aa13.49□□□□□ -0.25
SCLT1-204ENST00000503215 RHBDD3Q9Y3P4 386 aa13.49□□□□□ -0.25
SCLT1-204ENST00000503215 LRRC42Q9Y546 428 aa13.49□□□□□ -0.25
SCLT1-204ENST00000503215 hCG_38984A0A1B0GV85 526 aa13.48□□□□□ -0.25
SCLT1-204ENST00000503215 hCG_1807616A0A1W2PRN6 198 aa13.48□□□□□ -0.25
SCLT1-204ENST00000503215 OOEPA6NGQ2 149 aa13.48□□□□□ -0.25
SCLT1-204ENST00000503215 XRCC2O43543 280 aa13.48□□□□□ -0.25
SCLT1-204ENST00000503215 HSD11B1P28845 292 aa13.48□□□□□ -0.25
SCLT1-204ENST00000503215 SLC15A1P46059 708 aa13.48□□□□□ -0.25
SCLT1-204ENST00000503215 GSK3AP49840 483 aa13.48□□□□□ -0.25
SCLT1-204ENST00000503215 BLVRAP53004 296 aa13.48□□□□□ -0.25
SCLT1-204ENST00000503215 HCCSP53701 268 aa13.48□□□□□ -0.25
SCLT1-204ENST00000503215 TIGD6Q17RP2 521 aa13.48□□□□□ -0.25
SCLT1-204ENST00000503215 DEFB112Q30KQ8 113 aa13.48□□□□□ -0.25
SCLT1-204ENST00000503215 GFOD2Q3B7J2 385 aa13.48□□□□□ -0.25
SCLT1-204ENST00000503215 RUSC1-AS1Q66K80 236 aa13.48□□□□□ -0.25
SCLT1-204ENST00000503215 C9orf139Q6ZV77 190 aa13.48□□□□□ -0.25
SCLT1-204ENST00000503215 CPOQ8IVL8 374 aa13.48□□□□□ -0.25
SCLT1-204ENST00000503215 NOP16Q9Y3C1 178 aaKnown RBP13.48□□□□□ -0.25
SCLT1-204ENST00000503215 ARRDC5A6NEK1 342 aa13.47□□□□□ -0.25
SCLT1-204ENST00000503215 AQP12BA6NM10 295 aa13.47□□□□□ -0.25
SCLT1-204ENST00000503215 ANKRD30BLA7E2S9 258 aa13.47□□□□□ -0.25
SCLT1-204ENST00000503215 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.47□□□□□ -0.25
SCLT1-204ENST00000503215 GNGT2O14610 69 aa13.47□□□□□ -0.25
SCLT1-204ENST00000503215 RASSF2P50749 326 aa13.47□□□□□ -0.25
SCLT1-204ENST00000503215 AQP12AQ8IXF9 295 aa13.47□□□□□ -0.25
SCLT1-204ENST00000503215 SPERTQ8NA61 448 aa13.47□□□□□ -0.25
SCLT1-204ENST00000503215 OR8S1Q8NH09 359 aa13.47□□□□□ -0.25
SCLT1-204ENST00000503215 LRRC29Q8WV35 223 aa13.47□□□□□ -0.25
SCLT1-204ENST00000503215 TBX15Q96SF7 602 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms