RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 NTN1O95631 604 aa15.5■□□□□ 0.07
HMGXB3-201ENST00000502717 FABP4P15090 132 aa15.5■□□□□ 0.07
HMGXB3-201ENST00000502717 CD46P15529 392 aa15.5■□□□□ 0.07
HMGXB3-201ENST00000502717 CLDN17P56750 224 aa15.5■□□□□ 0.07
HMGXB3-201ENST00000502717 AWAT1Q58HT5 328 aa15.5■□□□□ 0.07
HMGXB3-201ENST00000502717 ZNF429Q86V71 674 aa15.5■□□□□ 0.07
HMGXB3-201ENST00000502717 SLC25A42Q86VD7 318 aa15.5■□□□□ 0.07
HMGXB3-201ENST00000502717 OR1E3Q8WZA6 343 aa15.5■□□□□ 0.07
HMGXB3-201ENST00000502717 FER1L6-AS2Q96M78 137 aa15.5■□□□□ 0.07
HMGXB3-201ENST00000502717 CTSFQ9UBX1 484 aa15.5■□□□□ 0.07
HMGXB3-201ENST00000502717 SERPINE3A8MV23 424 aa15.49■□□□□ 0.07
HMGXB3-201ENST00000502717 PLXDC2Q6UX71 529 aa15.49■□□□□ 0.07
HMGXB3-201ENST00000502717 PUSL1Q8N0Z8 303 aaKnown RBP15.49■□□□□ 0.07
HMGXB3-201ENST00000502717 LRRC18Q8N456 261 aa15.49■□□□□ 0.07
HMGXB3-201ENST00000502717 RTN4IP1Q8WWV3 396 aaPredicted RBP15.49■□□□□ 0.07
HMGXB3-201ENST00000502717 RSC1A1Q92681 617 aa15.49■□□□□ 0.07
HMGXB3-201ENST00000502717 NKX3-1Q99801 234 aaPredicted RBP15.49■□□□□ 0.07
HMGXB3-201ENST00000502717 PLK3Q9H4B4 646 aa15.49■□□□□ 0.07
HMGXB3-201ENST00000502717 MRM2Q9UI43 246 aaKnown RBP15.49■□□□□ 0.07
HMGXB3-201ENST00000502717 OLFM2O95897 454 aa15.49■□□□□ 0.07
HMGXB3-201ENST00000502717 CDKN2AP42771 156 aaKnown RBP15.49■□□□□ 0.07
HMGXB3-201ENST00000502717 TMEM176BQ3YBM2 270 aaPredicted RBP15.49■□□□□ 0.07
HMGXB3-201ENST00000502717 COL13A1Q5TAT6 717 aaPredicted RBP15.49■□□□□ 0.07
HMGXB3-201ENST00000502717 MRPS24Q96EL2 167 aaKnown RBP15.49■□□□□ 0.07
HMGXB3-201ENST00000502717 GPR84Q9NQS5 396 aa15.49■□□□□ 0.07
HMGXB3-201ENST00000502717 A0A1W2PPH5 198 aa15.49■□□□□ 0.07
HMGXB3-201ENST00000502717 MFNGO00587 321 aa15.49■□□□□ 0.07
HMGXB3-201ENST00000502717 VSIG10L2P0DP72 767 aa15.49■□□□□ 0.07
HMGXB3-201ENST00000502717 GLULP15104 373 aa15.49■□□□□ 0.07
HMGXB3-201ENST00000502717 RAB5AP20339 215 aa15.49■□□□□ 0.07
HMGXB3-201ENST00000502717 APOBEC1P41238 236 aaKnown RBP15.49■□□□□ 0.07
HMGXB3-201ENST00000502717 PIGPP57054 158 aa15.49■□□□□ 0.07
HMGXB3-201ENST00000502717 BAGE3Q86Y29 109 aa15.49■□□□□ 0.07
HMGXB3-201ENST00000502717 BAGE2Q86Y30 109 aa15.49■□□□□ 0.07
HMGXB3-201ENST00000502717 PIK3IP1Q96FE7 263 aa15.49■□□□□ 0.07
HMGXB3-201ENST00000502717 RSRP1Q9BUV0 290 aa15.49■□□□□ 0.07
HMGXB3-201ENST00000502717 CHST11Q9NPF2 352 aa15.49■□□□□ 0.07
HMGXB3-201ENST00000502717 TMEM9BQ9NQ34 198 aa15.49■□□□□ 0.07
HMGXB3-201ENST00000502717 A0A1B0GTH9 108 aa15.49■□□□□ 0.07
HMGXB3-201ENST00000502717 PRAMEF25A6NGN4 478 aa15.49■□□□□ 0.07
HMGXB3-201ENST00000502717 SNCAP37840 140 aa15.49■□□□□ 0.07
HMGXB3-201ENST00000502717 RPL7L1Q6DKI1 246 aaKnown RBP15.49■□□□□ 0.07
HMGXB3-201ENST00000502717 TNFRSF10CO14798 259 aa15.48■□□□□ 0.07
HMGXB3-201ENST00000502717 XRCC2O43543 280 aa15.48■□□□□ 0.07
HMGXB3-201ENST00000502717 GLI4P10075 376 aa15.48■□□□□ 0.07
HMGXB3-201ENST00000502717 BCKDHBP21953 392 aa15.48■□□□□ 0.07
HMGXB3-201ENST00000502717 LINC01555Q8NAE3 123 aa15.48■□□□□ 0.07
HMGXB3-201ENST00000502717 OR51A2Q8NGJ7 313 aa15.48■□□□□ 0.07
HMGXB3-201ENST00000502717 SUCNR1Q9BXA5 334 aa15.48■□□□□ 0.07
HMGXB3-201ENST00000502717 CHRNA9Q9UGM1 479 aa15.48■□□□□ 0.07
HMGXB3-201ENST00000502717 C7orf77A4D0Y5 90 aa15.48■□□□□ 0.07
HMGXB3-201ENST00000502717 CD27P26842 260 aa15.48■□□□□ 0.07
HMGXB3-201ENST00000502717 ZIC1Q15915 447 aa15.48■□□□□ 0.07
HMGXB3-201ENST00000502717 FAM109BQ6ICB4 259 aaPredicted RBP15.48■□□□□ 0.07
HMGXB3-201ENST00000502717 FAM185AQ8N0U4 392 aa15.48■□□□□ 0.07
HMGXB3-201ENST00000502717 AKR7A3O95154 331 aa15.48■□□□□ 0.07
HMGXB3-201ENST00000502717 PTGFRP43088 359 aa15.48■□□□□ 0.07
HMGXB3-201ENST00000502717 NAAAQ02083 359 aa15.48■□□□□ 0.07
HMGXB3-201ENST00000502717 ELAVL1Q15717 326 aaKnown RBP15.48■□□□□ 0.07
HMGXB3-201ENST00000502717 PRTGQ2VWP7 1150 aa15.48■□□□□ 0.07
HMGXB3-201ENST00000502717 FAM209BQ5JX69 171 aa15.48■□□□□ 0.07
HMGXB3-201ENST00000502717 NGBQ9NPG2 151 aa15.48■□□□□ 0.07
HMGXB3-201ENST00000502717 GUCA2BQ16661 112 aa15.48■□□□□ 0.07
HMGXB3-201ENST00000502717 TMEM268Q5VZI3 342 aa15.48■□□□□ 0.07
HMGXB3-201ENST00000502717 OTPQ5XKR4 325 aa15.48■□□□□ 0.07
HMGXB3-201ENST00000502717 TMEM184BQ9Y519 407 aaPredicted RBP15.48■□□□□ 0.07
HMGXB3-201ENST00000502717 NSG1A0A0A6YYJ2 146 aa15.47■□□□□ 0.07
HMGXB3-201ENST00000502717 ABCD4O14678 606 aa15.47■□□□□ 0.07
HMGXB3-201ENST00000502717 ZFAND5O76080 213 aa15.47■□□□□ 0.07
HMGXB3-201ENST00000502717 THEM4Q5T1C6 240 aa15.47■□□□□ 0.07
HMGXB3-201ENST00000502717 DCAF12L2Q5VW00 463 aa15.47■□□□□ 0.07
HMGXB3-201ENST00000502717 SHISA6Q6ZSJ9 500 aa15.47■□□□□ 0.07
HMGXB3-201ENST00000502717 FRRS1LQ9P0K9 344 aa15.47■□□□□ 0.07
HMGXB3-201ENST00000502717 PDGFBP01127 241 aaPredicted RBP15.47■□□□□ 0.07
HMGXB3-201ENST00000502717 METTL15P1P0C7V9 234 aa15.47■□□□□ 0.07
HMGXB3-201ENST00000502717 HTR5AP47898 357 aa15.47■□□□□ 0.07
HMGXB3-201ENST00000502717 NOVA1P51513 510 aaKnown RBP15.47■□□□□ 0.07
HMGXB3-201ENST00000502717 PDLIM3Q53GG5 364 aaPredicted RBP15.47■□□□□ 0.07
HMGXB3-201ENST00000502717 NUBPLQ8TB37 319 aa15.47■□□□□ 0.07
HMGXB3-201ENST00000502717 ELOA3CA0A087WX78 387 aaPredicted RBP15.47■□□□□ 0.07
HMGXB3-201ENST00000502717 LRP5LA4QPB2 252 aa15.47■□□□□ 0.07
HMGXB3-201ENST00000502717 ANKRD30BLA7E2S9 258 aa15.47■□□□□ 0.07
HMGXB3-201ENST00000502717 PTP4A3O75365 173 aa15.47■□□□□ 0.07
HMGXB3-201ENST00000502717 GSK3AP49840 483 aa15.47■□□□□ 0.07
HMGXB3-201ENST00000502717 OR2A2Q6IF42 318 aa15.47■□□□□ 0.07
HMGXB3-201ENST00000502717 SPEM1Q8N4L4 309 aa15.47■□□□□ 0.07
HMGXB3-201ENST00000502717 MITD1Q8WV92 249 aa15.47■□□□□ 0.07
HMGXB3-201ENST00000502717 EMC6Q9BV81 110 aa15.47■□□□□ 0.07
HMGXB3-201ENST00000502717 NRSN2Q9GZP1 204 aa15.47■□□□□ 0.07
HMGXB3-201ENST00000502717 WWTR1Q9GZV5 400 aa15.47■□□□□ 0.07
HMGXB3-201ENST00000502717 FBXL17Q9UF56 701 aa15.47■□□□□ 0.07
HMGXB3-201ENST00000502717 MBP02144 154 aa15.47■□□□□ 0.07
HMGXB3-201ENST00000502717 ERVK-16P61578 105 aa15.47■□□□□ 0.07
HMGXB3-201ENST00000502717 C9orf152Q5JTZ5 239 aa15.47■□□□□ 0.07
HMGXB3-201ENST00000502717 NCMAPQ5T1S8 102 aa15.47■□□□□ 0.07
HMGXB3-201ENST00000502717 LCN15Q6UWW0 184 aa15.47■□□□□ 0.07
HMGXB3-201ENST00000502717 ZNF547Q8IVP9 402 aa15.47■□□□□ 0.07
HMGXB3-201ENST00000502717 OR4N2Q8NGD1 307 aa15.47■□□□□ 0.07
HMGXB3-201ENST00000502717 ADAM19Q9H013 955 aa15.47■□□□□ 0.07
HMGXB3-201ENST00000502717 TP53TG5Q9Y2B4 290 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms