RNA–Protein interactions for RNA: ENST00000498528.1

KDM3A-215, Transcript of lysine demethylase 3A, human

TSL 3

Gene KDM3A, Length 352 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KDM3A-215	ENST00000498528	LMO1	P25800	156 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	SDHA	P31040	664 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	GNAL	P38405	381 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	IDH3A	P50213	366 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	CRYBA2	P53672	197 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	PRKCD	Q05655	676 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	CNN3	Q15417	329 aa	Known RBP	4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	RSPO1	Q2MKA7	263 aa	Predicted RBP	4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	VMAC	Q2NL98	169 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	GFOD2	Q3B7J2	385 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	C11orf91	Q3C1V1	193 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	CYBRD1	Q53TN4	286 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	RABL3	Q5HYI8	236 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	GLYATL3	Q5SZD4	288 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	TEX36	Q5VZQ5	186 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	DNM1P34	Q6PK57	102 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528		Q6ZS46	218 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	COLCA1	Q6ZS62	124 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	CPLX4	Q7Z7G2	160 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	PLPP7	Q8NBV4	271 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	PAPD5	Q8NDF8	572 aa	Known RBP	4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	WFDC9	Q8NEX5	89 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	TMEM185A	Q8NFB2	350 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	OR56B2P	Q8NGI1	322 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	OR5D13	Q8NGL4	314 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	TFAP2C	Q92754	450 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	SPTSSA	Q969W0	71 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	ZNF799	Q96GE5	643 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	CGREF1	Q99674	301 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	EBF4	Q9BQW3	602 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	ZNF649	Q9BS31	505 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	FNDC11	Q9BVV2	318 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	POLR2J2	Q9GZM3	115 aa	Known RBP	4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	POLR2J3	Q9H1A7	115 aa	Known RBP	4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	MUC13	Q9H3R2	512 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	NMNAT1	Q9HAN9	279 aa	Predicted RBP	4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	VSX1	Q9NZR4	365 aa	Predicted RBP	4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	ATPIF1	Q9UII2	106 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	IER3IP1	Q9Y5U9	82 aa		4.87	□□□□□ -1.63
KDM3A-215	ENST00000498528	SACS	Q9NZJ4	4579 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528		M0R1W7	72 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	DCTN6	O00399	190 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	CDC42EP2	O14613	210 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	CDIPT	O14735	213 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	SYNGR1	O43759	233 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	AHCYL1	O43865	530 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	GLCE	O94923	617 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	DUS4L	O95620	317 aa	Known RBP	4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	LHB	P01229	141 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	IFNA14	P01570	189 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	NHLRC4	P0CG21	123 aa	Predicted RBP	4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	AMY2B	P19961	511 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	ANOS1	P23352	680 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	CRABP1	P29762	137 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	MDH1	P40925	334 aa	Known RBP	4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	NAA10	P41227	235 aa	Predicted RBP	4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	RPS27	P42677	84 aa	Known RBP	4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	CDKN2A	P42771	156 aa	Known RBP	4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	PRKX	P51817	358 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	SLC7A2	P52569	658 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	RAB25	P57735	213 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	BLCAP	P62952	87 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	HIST1H3A	P68431	136 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	DCTN2	Q13561	401 aa	Known RBP	4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	FHL1	Q13642	323 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	TRAM2	Q15035	370 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	TAF13	Q15543	124 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	DGUOK	Q16854	277 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	RFX4	Q33E94	735 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	ANKDD1A	Q495B1	522 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	ZBED5	Q49AG3	693 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	HIST2H3PS2	Q5TEC6	136 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	STUM	Q69YW2	141 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	SLC18B1	Q6NT16	456 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	PGM2L1	Q6PCE3	622 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	CRIP3	Q6Q6R5	217 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	TBPL2	Q6SJ96	375 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	WDR82	Q6UXN9	313 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	ZNF782	Q6ZMW2	699 aa	Predicted RBP	4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	LIAT1	Q6ZQX7	453 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	PTCHD4	Q6ZW05	846 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	KCTD8	Q6ZWB6	473 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	HIST2H3A	Q71DI3	136 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	CCDC80	Q76M96	950 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	MEPCE	Q7L2J0	689 aa	Known RBP	4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	FAM122B	Q7Z309	247 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	TSEN54	Q7Z6J9	526 aa	Known RBP	4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	LHFPL4	Q7Z7J7	247 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	WDR86	Q86TI4	376 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	MKX	Q8IYA7	352 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	OR6V1	Q8N148	313 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	MREG	Q8N565	214 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	SDR9C7	Q8NEX9	313 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	OR1M1	Q8NGA1	313 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	RPS4Y2	Q8TD47	263 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	MYDGF	Q969H8	173 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	FAM46A	Q96IP4	442 aa	Known RBP	4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	PRRC1	Q96M27	445 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	GAFA1	Q96PS6	74 aa		4.86	□□□□□ -1.63
KDM3A-215	ENST00000498528	TMEM109	Q9BVC6	243 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms