RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 BRD7Q9NPI1 651 aa7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 C14orf119Q9NWQ9 140 aa7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 FAM53CQ9NYF3 392 aa7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 DNAJC27Q9NZQ0 273 aa7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 KIF17Q9P2E2 1029 aa7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 DNAJB9Q9UBS3 223 aa7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 CLN8Q9UBY8 286 aa7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 POMPQ9Y244 141 aa7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 hCG_38984A0A1B0GV85 526 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 hCG_1807616A0A1W2PRN6 198 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 LGALS8O00214 317 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 PHYHO14832 338 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 PRODHO43272 600 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 SELENOFO60613 162 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 PTBP3O95758 552 aaKnown RBP7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 GRPP07492 148 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 PPIAL4GP0DN37 164 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 CFL1P23528 166 aaKnown RBP7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 CD80P33681 288 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 PSMB10P40306 273 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 OPRL1P41146 370 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 NPY4RP50391 375 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 ZNF121P58317 390 aaPredicted RBP7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 RPS7P62081 194 aaKnown RBP7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 FAM3AP98173 230 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 HOXA4Q00056 320 aaPredicted RBP7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 PAX2Q02962 417 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 OR8B8Q15620 311 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 KCNJ8Q15842 424 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 GFOD2Q3B7J2 385 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 SLC35D3Q5M8T2 416 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 WDR25Q64LD2 544 aaPredicted RBP7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 SFRP4Q6FHJ7 346 aaPredicted RBP7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 RBMS3Q6XE24 437 aaKnown RBP7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 FAM57BQ71RH2 274 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 PRSS45Q7RTY3 260 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 CPOQ8IVL8 374 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 PARP8Q8N3A8 854 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 ZDHHC22Q8N966 263 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 BOLLQ8N9W6 283 aaKnown RBP7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 PAPD5Q8NDF8 572 aaKnown RBP7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 OR8S1Q8NH09 359 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 OTOSQ8NHW6 89 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 THEM6Q8WUY1 208 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 RAB40AQ8WXH6 277 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 DNAJC9Q8WXX5 260 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 GCDHQ92947 438 aaPredicted RBP7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 SGK3Q96BR1 496 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 PGAM5Q96HS1 289 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 TECTBQ96PL2 329 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 NUDT16L1Q9BRJ7 211 aaKnown RBP7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 TEX12Q9BXU0 123 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 MS4A7Q9GZW8 240 aaPredicted RBP7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 OR10A2Q9H208 303 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 ESM1Q9NQ30 184 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 TRIM36Q9NQ86 728 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 C1orf123Q9NWV4 160 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 ZNF69Q9UC07 566 aa7.07□□□□□ -1.28
HMGXB4-207ENST00000498212 TRAV38-1A0A0B4J264 116 aa7.06□□□□□ -1.28
HMGXB4-207ENST00000498212 TRAV40A0A0B4J280 105 aa7.06□□□□□ -1.28
HMGXB4-207ENST00000498212 KIR2DS1A0A191URI9 304 aa7.06□□□□□ -1.28
HMGXB4-207ENST00000498212 TMEM89A2RUT3 159 aa7.06□□□□□ -1.28
HMGXB4-207ENST00000498212 OOEPA6NGQ2 149 aa7.06□□□□□ -1.28
HMGXB4-207ENST00000498212 GSC2O15499 205 aa7.06□□□□□ -1.28
HMGXB4-207ENST00000498212 NDUFA2O43678 99 aa7.06□□□□□ -1.28
HMGXB4-207ENST00000498212 TIPRLO75663 272 aa7.06□□□□□ -1.28
HMGXB4-207ENST00000498212 CFPP27918 469 aa7.06□□□□□ -1.28
HMGXB4-207ENST00000498212 GNALP38405 381 aa7.06□□□□□ -1.28
HMGXB4-207ENST00000498212 NAA10P41227 235 aaPredicted RBP7.06□□□□□ -1.28
HMGXB4-207ENST00000498212 COMPP49747 757 aaPredicted RBP7.06□□□□□ -1.28
HMGXB4-207ENST00000498212 GSK3AP49840 483 aa7.06□□□□□ -1.28
HMGXB4-207ENST00000498212 UBA52P62987 128 aaKnown RBP7.06□□□□□ -1.28
HMGXB4-207ENST00000498212 SNCBQ16143 134 aa7.06□□□□□ -1.28
HMGXB4-207ENST00000498212 TUSC1Q2TAM9 212 aa7.06□□□□□ -1.28
HMGXB4-207ENST00000498212 TMEM236Q5W0B7 351 aa7.06□□□□□ -1.28
HMGXB4-207ENST00000498212 ZNF841Q6ZN19 808 aa7.06□□□□□ -1.28
HMGXB4-207ENST00000498212 ZNF826PQ6ZT77 177 aa7.06□□□□□ -1.28
HMGXB4-207ENST00000498212 DOK3Q7L591 496 aa7.06□□□□□ -1.28
HMGXB4-207ENST00000498212 BCL6BQ8N143 479 aaPredicted RBP7.06□□□□□ -1.28
HMGXB4-207ENST00000498212 GCSAMQ8N6F7 178 aa7.06□□□□□ -1.28
HMGXB4-207ENST00000498212 SIGLECL1Q8N7X8 197 aa7.06□□□□□ -1.28
HMGXB4-207ENST00000498212 CSNK2A3Q8NEV1 391 aa7.06□□□□□ -1.28
HMGXB4-207ENST00000498212 BBS1Q8NFJ9 593 aa7.06□□□□□ -1.28
HMGXB4-207ENST00000498212 DACT3Q96B18 629 aaPredicted RBP7.06□□□□□ -1.28
HMGXB4-207ENST00000498212 UPRTQ96BW1 309 aa7.06□□□□□ -1.28
HMGXB4-207ENST00000498212 NRBF2Q96F24 287 aa7.06□□□□□ -1.28
HMGXB4-207ENST00000498212 PAPOLGQ9BWT3 736 aaKnown RBP7.06□□□□□ -1.28
HMGXB4-207ENST00000498212 RGCCQ9H4X1 137 aa7.06□□□□□ -1.28
HMGXB4-207ENST00000498212 SLC25A19Q9HC21 320 aa7.06□□□□□ -1.28
HMGXB4-207ENST00000498212 PAPOLBQ9NRJ5 636 aaKnown RBP7.06□□□□□ -1.28
HMGXB4-207ENST00000498212 ZNF319Q9P2F9 582 aa7.06□□□□□ -1.28
HMGXB4-207ENST00000498212 ERVK-18Q9QC07 812 aa7.06□□□□□ -1.28
HMGXB4-207ENST00000498212 CTSZQ9UBR2 303 aa7.06□□□□□ -1.28
HMGXB4-207ENST00000498212 IGHV3OR16-10A0A075B7F0 116 aa7.05□□□□□ -1.28
HMGXB4-207ENST00000498212 C22orf46C9J442 243 aa7.05□□□□□ -1.28
HMGXB4-207ENST00000498212 ADAM20O43506 726 aa7.05□□□□□ -1.28
HMGXB4-207ENST00000498212 ENSAO43768 121 aaKnown RBP7.05□□□□□ -1.28
HMGXB4-207ENST00000498212 PLATP00750 562 aa7.05□□□□□ -1.28
HMGXB4-207ENST00000498212 GYPAP02724 150 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms