RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 ZNF841Q6ZN19 808 aa15.45■□□□□ 0.06
PRKCB-209ENST00000498058 OR4Q3Q8NH05 313 aa15.45■□□□□ 0.06
PRKCB-209ENST00000498058 NEIL1Q96FI4 390 aaPredicted RBP15.45■□□□□ 0.06
PRKCB-209ENST00000498058 HRASLS5Q96KN8 279 aa15.45■□□□□ 0.06
PRKCB-209ENST00000498058 APOL4Q9BPW4 351 aa15.45■□□□□ 0.06
PRKCB-209ENST00000498058 CDADC1Q9BWV3 514 aa15.45■□□□□ 0.06
PRKCB-209ENST00000498058 ZNF696Q9H7X3 374 aa15.45■□□□□ 0.06
PRKCB-209ENST00000498058 RPRD1BQ9NQG5 326 aaKnown RBP15.45■□□□□ 0.06
PRKCB-209ENST00000498058 TMEM100Q9NV29 134 aa15.45■□□□□ 0.06
PRKCB-209ENST00000498058 FAM118AQ9NWS6 357 aa15.45■□□□□ 0.06
PRKCB-209ENST00000498058 MRPL22Q9NWU5 206 aaKnown RBP15.45■□□□□ 0.06
PRKCB-209ENST00000498058 IMPAD1Q9NX62 359 aa15.45■□□□□ 0.06
PRKCB-209ENST00000498058 MIOXQ9UGB7 285 aa15.45■□□□□ 0.06
PRKCB-209ENST00000498058 GMPPBQ9Y5P6 360 aa15.45■□□□□ 0.06
PRKCB-209ENST00000498058 KIR2DS1A0A191URI9 304 aa15.44■□□□□ 0.06
PRKCB-209ENST00000498058 LOC100130705A0A1B0GUX0 176 aa15.44■□□□□ 0.06
PRKCB-209ENST00000498058 OR6C68A6NDL8 312 aa15.44■□□□□ 0.06
PRKCB-209ENST00000498058 F5H5K5 113 aa15.44■□□□□ 0.06
PRKCB-209ENST00000498058 CLDN34H7C241 214 aa15.44■□□□□ 0.06
PRKCB-209ENST00000498058 PPIAL4GP0DN37 164 aa15.44■□□□□ 0.06
PRKCB-209ENST00000498058 GATA4P43694 442 aa15.44■□□□□ 0.06
PRKCB-209ENST00000498058 AQP4P55087 323 aa15.44■□□□□ 0.06
PRKCB-209ENST00000498058 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.44■□□□□ 0.06
PRKCB-209ENST00000498058 IL18R1Q13478 541 aa15.44■□□□□ 0.06
PRKCB-209ENST00000498058 SNAPC1Q16533 368 aa15.44■□□□□ 0.06
PRKCB-209ENST00000498058 SLC35F1Q5T1Q4 408 aa15.44■□□□□ 0.06
PRKCB-209ENST00000498058 TMEM236Q5W0B7 351 aa15.44■□□□□ 0.06
PRKCB-209ENST00000498058 ZBTB46Q86UZ6 589 aa15.44■□□□□ 0.06
PRKCB-209ENST00000498058 OR10S1Q8NGN2 331 aa15.44■□□□□ 0.06
PRKCB-209ENST00000498058 ZNRF4Q8WWF5 429 aa15.44■□□□□ 0.06
PRKCB-209ENST00000498058 MAP6Q96JE9 813 aa15.44■□□□□ 0.06
PRKCB-209ENST00000498058 ADI1Q9BV57 179 aa15.44■□□□□ 0.06
PRKCB-209ENST00000498058 ZMAT3Q9HA38 289 aaKnown RBP15.44■□□□□ 0.06
PRKCB-209ENST00000498058 CMC2Q9NRP2 79 aa15.44■□□□□ 0.06
PRKCB-209ENST00000498058 TVP23BQ9NYZ1 205 aa15.44■□□□□ 0.06
PRKCB-209ENST00000498058 CYB5R1Q9UHQ9 305 aa15.44■□□□□ 0.06
PRKCB-209ENST00000498058 C22orf46C9J442 243 aa15.43■□□□□ 0.06
PRKCB-209ENST00000498058 DLGAP1O14490 977 aa15.43■□□□□ 0.06
PRKCB-209ENST00000498058 MPZL2O60487 215 aa15.43■□□□□ 0.06
PRKCB-209ENST00000498058 FAM20BO75063 409 aa15.43■□□□□ 0.06
PRKCB-209ENST00000498058 FSTL3O95633 263 aa15.43■□□□□ 0.06
PRKCB-209ENST00000498058 MDKP21741 143 aaPredicted RBP15.43■□□□□ 0.06
PRKCB-209ENST00000498058 POLR2IP36954 125 aaKnown RBP15.43■□□□□ 0.06
PRKCB-209ENST00000498058 CAPGP40121 348 aa15.43■□□□□ 0.06
PRKCB-209ENST00000498058 RPS27P42677 84 aaKnown RBP15.43■□□□□ 0.06
PRKCB-209ENST00000498058 PITPNBP48739 271 aa15.43■□□□□ 0.06
PRKCB-209ENST00000498058 WDR25Q64LD2 544 aaPredicted RBP15.43■□□□□ 0.06
PRKCB-209ENST00000498058 C12orf73Q69YU5 71 aa15.43■□□□□ 0.06
PRKCB-209ENST00000498058 DNM1P34Q6PK57 102 aa15.43■□□□□ 0.06
PRKCB-209ENST00000498058 BTNL3Q6UXE8 466 aa15.43■□□□□ 0.06
PRKCB-209ENST00000498058 BRD3OSQ6XYD6 125 aa15.43■□□□□ 0.06
PRKCB-209ENST00000498058 SETD9Q8NE22 299 aa15.43■□□□□ 0.06
PRKCB-209ENST00000498058 SDR9C7Q8NEX9 313 aa15.43■□□□□ 0.06
PRKCB-209ENST00000498058 Q8TCH9 128 aa15.43■□□□□ 0.06
PRKCB-209ENST00000498058 TRUB1Q8WWH5 349 aaKnown RBP15.43■□□□□ 0.06
PRKCB-209ENST00000498058 ZNF184Q99676 751 aaPredicted RBP15.43■□□□□ 0.06
PRKCB-209ENST00000498058 PITX2Q99697 317 aa15.43■□□□□ 0.06
PRKCB-209ENST00000498058 NUDT16L1Q9BRJ7 211 aaKnown RBP15.43■□□□□ 0.06
PRKCB-209ENST00000498058 Q9H521 79 aa15.43■□□□□ 0.06
PRKCB-209ENST00000498058 UFSP2Q9NUQ7 469 aa15.43■□□□□ 0.06
PRKCB-209ENST00000498058 OMGP23515 440 aa15.42■□□□□ 0.06
PRKCB-209ENST00000498058 CPT2P23786 658 aa15.42■□□□□ 0.06
PRKCB-209ENST00000498058 EPHA2P29317 976 aa15.42■□□□□ 0.06
PRKCB-209ENST00000498058 CD200P41217 278 aa15.42■□□□□ 0.06
PRKCB-209ENST00000498058 DEFB112Q30KQ8 113 aa15.42■□□□□ 0.06
PRKCB-209ENST00000498058 LYPD4Q6UWN0 246 aa15.42■□□□□ 0.06
PRKCB-209ENST00000498058 OR8B3Q8NGG8 313 aa15.42■□□□□ 0.06
PRKCB-209ENST00000498058 FAM81AQ8TBF8 368 aa15.42■□□□□ 0.06
PRKCB-209ENST00000498058 SLC25A28Q96A46 364 aa15.42■□□□□ 0.06
PRKCB-209ENST00000498058 OR8B2Q96RD0 313 aa15.42■□□□□ 0.06
PRKCB-209ENST00000498058 DDOQ99489 341 aa15.42■□□□□ 0.06
PRKCB-209ENST00000498058 ATF6BQ99941 703 aa15.42■□□□□ 0.06
PRKCB-209ENST00000498058 HCAR1Q9BXC0 346 aa15.42■□□□□ 0.06
PRKCB-209ENST00000498058 CTSZQ9UBR2 303 aa15.42■□□□□ 0.06
PRKCB-209ENST00000498058 PRR23D1E9PI22 279 aaPredicted RBP15.41■□□□□ 0.06
PRKCB-209ENST00000498058 FCN3O75636 299 aa15.41■□□□□ 0.06
PRKCB-209ENST00000498058 LCATP04180 440 aa15.41■□□□□ 0.06
PRKCB-209ENST00000498058 PRR23D2P0DMB1 279 aaPredicted RBP15.41■□□□□ 0.06
PRKCB-209ENST00000498058 PYCR1P32322 319 aa15.41■□□□□ 0.06
PRKCB-209ENST00000498058 PSMB10P40306 273 aa15.41■□□□□ 0.06
PRKCB-209ENST00000498058 FGF12P61328 243 aa15.41■□□□□ 0.06
PRKCB-209ENST00000498058 ADARB1P78563 741 aaKnown RBP15.41■□□□□ 0.06
PRKCB-209ENST00000498058 SNAI3Q3KNW1 292 aa15.41■□□□□ 0.06
PRKCB-209ENST00000498058 RUSC1-AS1Q66K80 236 aa15.41■□□□□ 0.06
PRKCB-209ENST00000498058 OR8J1Q8NGP2 316 aa15.41■□□□□ 0.06
PRKCB-209ENST00000498058 PRDM13Q9H4Q3 707 aa15.41■□□□□ 0.06
PRKCB-209ENST00000498058 RAB26Q9ULW5 256 aa15.41■□□□□ 0.06
PRKCB-209ENST00000498058 E9PQ18 207 aa15.4■□□□□ 0.06
PRKCB-209ENST00000498058 TNFRSF13BO14836 293 aaPredicted RBP15.4■□□□□ 0.06
PRKCB-209ENST00000498058 HOXA3O43365 443 aaPredicted RBP15.4■□□□□ 0.06
PRKCB-209ENST00000498058 CA6P23280 308 aa15.4■□□□□ 0.06
PRKCB-209ENST00000498058 MTNR1AP48039 350 aa15.4■□□□□ 0.06
PRKCB-209ENST00000498058 IL13RA1P78552 427 aa15.4■□□□□ 0.06
PRKCB-209ENST00000498058 SRSF4Q08170 494 aaKnown RBP15.4■□□□□ 0.06
PRKCB-209ENST00000498058 C16orf87Q6PH81 154 aa15.4■□□□□ 0.06
PRKCB-209ENST00000498058 DCDC5Q6ZRR9 648 aa15.4■□□□□ 0.06
PRKCB-209ENST00000498058 C8orf59Q8N0T1 100 aaPredicted RBP15.4■□□□□ 0.06
PRKCB-209ENST00000498058 C1orf87Q8N0U7 546 aa15.4■□□□□ 0.06
PRKCB-209ENST00000498058 CELF2-AS1Q8N7Q2 184 aa15.4■□□□□ 0.06
PRKCB-209ENST00000498058 SLC37A3Q8NCC5 494 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms