RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, human

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-210	ENST00000496840	LINC00336	Q6ZUF6	198 aa		2.58	□□□□□ -2
TARDBP-210	ENST00000496840	CMTM8	Q8IZV2	173 aa		2.58	□□□□□ -2
TARDBP-210	ENST00000496840	CSGALNACT2	Q8N6G5	542 aa		2.58	□□□□□ -2
TARDBP-210	ENST00000496840	NAT6	Q93015	286 aa		2.58	□□□□□ -2
TARDBP-210	ENST00000496840	APH1A	Q96BI3	265 aa		2.58	□□□□□ -2
TARDBP-210	ENST00000496840	HAUS1	Q96CS2	278 aa		2.58	□□□□□ -2
TARDBP-210	ENST00000496840	AGMAT	Q9BSE5	352 aa		2.58	□□□□□ -2
TARDBP-210	ENST00000496840	DEFB129	Q9H1M3	183 aa		2.58	□□□□□ -2
TARDBP-210	ENST00000496840	C1orf198	Q9H425	327 aa		2.58	□□□□□ -2
TARDBP-210	ENST00000496840	CD209	Q9NNX6	404 aa		2.58	□□□□□ -2
TARDBP-210	ENST00000496840	PEF1	Q9UBV8	284 aa	Known RBP	2.58	□□□□□ -2
TARDBP-210	ENST00000496840	SIGLEC9	Q9Y336	463 aa		2.58	□□□□□ -2
TARDBP-210	ENST00000496840	AHDC1	Q5TGY3	1603 aa	Predicted RBP	2.57	□□□□□ -2
TARDBP-210	ENST00000496840	IGHV7-4-1	A0A0J9YVY3	117 aa		2.57	□□□□□ -2
TARDBP-210	ENST00000496840	CHST10	O43529	356 aa		2.57	□□□□□ -2
TARDBP-210	ENST00000496840	XRCC2	O43543	280 aa		2.57	□□□□□ -2
TARDBP-210	ENST00000496840	SERPINB7	O75635	380 aa		2.57	□□□□□ -2
TARDBP-210	ENST00000496840	IGHV3-11	P01762	117 aa		2.57	□□□□□ -2
TARDBP-210	ENST00000496840	IL4	P05112	153 aa		2.57	□□□□□ -2
TARDBP-210	ENST00000496840	ZNF688	P0C7X2	276 aa		2.57	□□□□□ -2
TARDBP-210	ENST00000496840	GPR1	P46091	355 aa		2.57	□□□□□ -2
TARDBP-210	ENST00000496840	DAOA	P59103	153 aa		2.57	□□□□□ -2
TARDBP-210	ENST00000496840	ATP6V0D1	P61421	351 aa		2.57	□□□□□ -2
TARDBP-210	ENST00000496840	DNAJC3	Q13217	504 aa		2.57	□□□□□ -2
TARDBP-210	ENST00000496840	RTL4	Q6ZR62	310 aa		2.57	□□□□□ -2
TARDBP-210	ENST00000496840	ZNF645	Q8N7E2	425 aa		2.57	□□□□□ -2
TARDBP-210	ENST00000496840	INO80E	Q8NBZ0	244 aa	Predicted RBP	2.57	□□□□□ -2
TARDBP-210	ENST00000496840	PROKR2	Q8NFJ6	384 aa		2.57	□□□□□ -2
TARDBP-210	ENST00000496840	KCNS1	Q96KK3	526 aa		2.57	□□□□□ -2
TARDBP-210	ENST00000496840	SULT4A1	Q9BR01	284 aa		2.57	□□□□□ -2
TARDBP-210	ENST00000496840	TIMM29	Q9BSF4	260 aa		2.57	□□□□□ -2
TARDBP-210	ENST00000496840	CYP3A43	Q9HB55	503 aa		2.57	□□□□□ -2
TARDBP-210	ENST00000496840	ZNF257	Q9Y2Q1	563 aa		2.57	□□□□□ -2
TARDBP-210	ENST00000496840	ADGRA3	Q8IWK6	1321 aa		2.57	□□□□□ -2
TARDBP-210	ENST00000496840	TNFRSF11B	O00300	401 aa		2.56	□□□□□ -2
TARDBP-210	ENST00000496840	RAD1	O60671	282 aa		2.56	□□□□□ -2
TARDBP-210	ENST00000496840	HLA-DQB1	P01920	261 aa		2.56	□□□□□ -2
TARDBP-210	ENST00000496840	CAT	P04040	527 aa	Known RBP	2.56	□□□□□ -2
TARDBP-210	ENST00000496840	TCP1	P17987	556 aa	Known RBP	2.56	□□□□□ -2
TARDBP-210	ENST00000496840	RAB5A	P20339	215 aa		2.56	□□□□□ -2
TARDBP-210	ENST00000496840	ME2	P23368	584 aa		2.56	□□□□□ -2
TARDBP-210	ENST00000496840	COL8A2	P25067	703 aa		2.56	□□□□□ -2
TARDBP-210	ENST00000496840	TALDO1	P37837	337 aa		2.56	□□□□□ -2
TARDBP-210	ENST00000496840	PITPNA	Q00169	270 aa		2.56	□□□□□ -2
TARDBP-210	ENST00000496840	PPID	Q08752	370 aa	Known RBP	2.56	□□□□□ -2
TARDBP-210	ENST00000496840	PNOC	Q13519	176 aa		2.56	□□□□□ -2
TARDBP-210	ENST00000496840	KLHL40	Q2TBA0	621 aa		2.56	□□□□□ -2
TARDBP-210	ENST00000496840	UNC93A	Q86WB7	457 aa		2.56	□□□□□ -2
TARDBP-210	ENST00000496840	TMEM256	Q8N2U0	113 aa		2.56	□□□□□ -2
TARDBP-210	ENST00000496840	TRAM1L1	Q8N609	369 aa		2.56	□□□□□ -2
TARDBP-210	ENST00000496840	C19orf18	Q8NEA5	215 aa		2.56	□□□□□ -2
TARDBP-210	ENST00000496840	TTL	Q8NG68	377 aa		2.56	□□□□□ -2
TARDBP-210	ENST00000496840	ITFG1	Q8TB96	612 aa		2.56	□□□□□ -2
TARDBP-210	ENST00000496840	SLC25A46	Q96AG3	418 aa		2.56	□□□□□ -2
TARDBP-210	ENST00000496840	C18orf15	Q96N68	181 aa		2.56	□□□□□ -2
TARDBP-210	ENST00000496840	CSPG4P5	Q96PW8	444 aa		2.56	□□□□□ -2
TARDBP-210	ENST00000496840	GPR21	Q99679	349 aa		2.56	□□□□□ -2
TARDBP-210	ENST00000496840	NAA50	Q9GZZ1	169 aa	Known RBP	2.56	□□□□□ -2
TARDBP-210	ENST00000496840	RPRD1B	Q9NQG5	326 aa	Known RBP	2.56	□□□□□ -2
TARDBP-210	ENST00000496840	MCUB	Q9NWR8	336 aa		2.56	□□□□□ -2
TARDBP-210	ENST00000496840	SLC22A20	A6NK97	555 aa		2.55	□□□□□ -2
TARDBP-210	ENST00000496840	OR5H1	A6NKK0	313 aa		2.55	□□□□□ -2
TARDBP-210	ENST00000496840		K7EM74	188 aa		2.55	□□□□□ -2
TARDBP-210	ENST00000496840	CTNS	O60931	367 aa		2.55	□□□□□ -2
TARDBP-210	ENST00000496840	MPDU1	O75352	247 aa		2.55	□□□□□ -2
TARDBP-210	ENST00000496840	FARS2	O95363	451 aa	Known RBP	2.55	□□□□□ -2
TARDBP-210	ENST00000496840	HTR1D	P28221	377 aa		2.55	□□□□□ -2
TARDBP-210	ENST00000496840	SCN1A	P35498	2009 aa		2.55	□□□□□ -2
TARDBP-210	ENST00000496840	GGT2	P36268	569 aa		2.55	□□□□□ -2
TARDBP-210	ENST00000496840	OR1G1	P47890	313 aa		2.55	□□□□□ -2
TARDBP-210	ENST00000496840	TSC22D1	Q15714	1073 aa		2.55	□□□□□ -2
TARDBP-210	ENST00000496840	KRTAP6-3	Q3LI67	103 aa		2.55	□□□□□ -2
TARDBP-210	ENST00000496840	TTC19	Q6DKK2	380 aa	Predicted RBP	2.55	□□□□□ -2
TARDBP-210	ENST00000496840	H3F3C	Q6NXT2	135 aa		2.55	□□□□□ -2
TARDBP-210	ENST00000496840	ANGPTL8	Q6UXH0	198 aa		2.55	□□□□□ -2
TARDBP-210	ENST00000496840	OR4M1	Q8NGD0	313 aa		2.55	□□□□□ -2
TARDBP-210	ENST00000496840	OR1J4	Q8NGS1	313 aa		2.55	□□□□□ -2
TARDBP-210	ENST00000496840	SHROOM3	Q8TF72	1996 aa		2.55	□□□□□ -2
TARDBP-210	ENST00000496840	CERS2	Q96G23	380 aa		2.55	□□□□□ -2
TARDBP-210	ENST00000496840	FAM19A4	Q96LR4	140 aa		2.55	□□□□□ -2
TARDBP-210	ENST00000496840	CDX2	Q99626	313 aa	Predicted RBP	2.55	□□□□□ -2
TARDBP-210	ENST00000496840	RSG1	Q9BU20	258 aa		2.55	□□□□□ -2
TARDBP-210	ENST00000496840	TOLLIP	Q9H0E2	274 aa		2.55	□□□□□ -2
TARDBP-210	ENST00000496840	BLZF1	Q9H2G9	400 aa		2.55	□□□□□ -2
TARDBP-210	ENST00000496840	FBXO6	Q9NRD1	293 aa	Predicted RBP	2.55	□□□□□ -2
TARDBP-210	ENST00000496840	CARHSP1	Q9Y2V2	147 aa	Known RBP	2.55	□□□□□ -2
TARDBP-210	ENST00000496840	TRAV6	A0A075B6T7	132 aa		2.54	□□□□□ -2
TARDBP-210	ENST00000496840	TAAR5	O14804	337 aa		2.54	□□□□□ -2
TARDBP-210	ENST00000496840	SLC19A2	O60779	497 aa		2.54	□□□□□ -2
TARDBP-210	ENST00000496840	GZMA	P12544	262 aa		2.54	□□□□□ -2
TARDBP-210	ENST00000496840	CCT6A	P40227	531 aa	Known RBP	2.54	□□□□□ -2
TARDBP-210	ENST00000496840	CCNG1	P51959	295 aa		2.54	□□□□□ -2
TARDBP-210	ENST00000496840	UBE2E1	P51965	193 aa		2.54	□□□□□ -2
TARDBP-210	ENST00000496840	OR2B8P	P59922	312 aa		2.54	□□□□□ -2
TARDBP-210	ENST00000496840	DOC2A	Q14183	400 aa		2.54	□□□□□ -2
TARDBP-210	ENST00000496840	TFDP2	Q14188	446 aa		2.54	□□□□□ -2
TARDBP-210	ENST00000496840	C5orf64	Q2M2E5	130 aa		2.54	□□□□□ -2
TARDBP-210	ENST00000496840	TEX30	Q5JUR7	227 aa		2.54	□□□□□ -2
TARDBP-210	ENST00000496840	AP1AR	Q63HQ0	302 aa		2.54	□□□□□ -2
TARDBP-210	ENST00000496840	RWDD4	Q6NW29	188 aa	Known RBP	2.54	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms