RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 IFNL4K9M1U5 179 aa13.53□□□□□ -0.24
DNMT3A-215ENST00000496570 FAM20BO75063 409 aa13.53□□□□□ -0.24
DNMT3A-215ENST00000496570 ZNF254O75437 659 aa13.53□□□□□ -0.24
DNMT3A-215ENST00000496570 ZNF205O95201 554 aa13.53□□□□□ -0.24
DNMT3A-215ENST00000496570 PNPP00491 289 aa13.53□□□□□ -0.24
DNMT3A-215ENST00000496570 FAM157CP0CG43 387 aa13.53□□□□□ -0.24
DNMT3A-215ENST00000496570 ZFP36P26651 326 aaKnown RBP13.53□□□□□ -0.24
DNMT3A-215ENST00000496570 DDOSTP39656 456 aa13.53□□□□□ -0.24
DNMT3A-215ENST00000496570 CDC42P60953 191 aa13.53□□□□□ -0.24
DNMT3A-215ENST00000496570 SEC61A1P61619 476 aaKnown RBP13.53□□□□□ -0.24
DNMT3A-215ENST00000496570 GFOD2Q3B7J2 385 aa13.53□□□□□ -0.24
DNMT3A-215ENST00000496570 SLC25A30Q5SVS4 291 aa13.53□□□□□ -0.24
DNMT3A-215ENST00000496570 ZNF684Q5T5D7 378 aa13.53□□□□□ -0.24
DNMT3A-215ENST00000496570 KCTD18Q6PI47 426 aaPredicted RBP13.53□□□□□ -0.24
DNMT3A-215ENST00000496570 ZNF322Q6U7Q0 402 aaPredicted RBP13.53□□□□□ -0.24
DNMT3A-215ENST00000496570 PEG10Q86TG7 708 aaKnown RBP13.53□□□□□ -0.24
DNMT3A-215ENST00000496570 GLCCI1Q86VQ1 547 aa13.53□□□□□ -0.24
DNMT3A-215ENST00000496570 FAM81AQ8TBF8 368 aa13.53□□□□□ -0.24
DNMT3A-215ENST00000496570 ERGIC1Q969X5 290 aa13.53□□□□□ -0.24
DNMT3A-215ENST00000496570 RAB39BQ96DA2 213 aa13.53□□□□□ -0.24
DNMT3A-215ENST00000496570 MNTQ99583 582 aa13.53□□□□□ -0.24
DNMT3A-215ENST00000496570 C9orf16Q9BUW7 83 aa13.53□□□□□ -0.24
DNMT3A-215ENST00000496570 BEX2Q9BXY8 128 aa13.53□□□□□ -0.24
DNMT3A-215ENST00000496570 MROQ9BYG7 248 aa13.53□□□□□ -0.24
DNMT3A-215ENST00000496570 FGF23Q9GZV9 251 aaPredicted RBP13.53□□□□□ -0.24
DNMT3A-215ENST00000496570 SHARPINQ9H0F6 387 aa13.53□□□□□ -0.24
DNMT3A-215ENST00000496570 TMEM165Q9HC07 324 aa13.53□□□□□ -0.24
DNMT3A-215ENST00000496570 UFSP2Q9NUQ7 469 aa13.53□□□□□ -0.24
DNMT3A-215ENST00000496570 HIF1ANQ9NWT6 349 aa13.53□□□□□ -0.24
DNMT3A-215ENST00000496570 UBAP1Q9NZ09 502 aa13.53□□□□□ -0.24
DNMT3A-215ENST00000496570 LPAR3Q9UBY5 353 aa13.53□□□□□ -0.24
DNMT3A-215ENST00000496570 MRM2Q9UI43 246 aaKnown RBP13.53□□□□□ -0.24
DNMT3A-215ENST00000496570 TMEM269A0A1B0GVZ9 245 aa13.52□□□□□ -0.25
DNMT3A-215ENST00000496570 ACOD1A6NK06 481 aa13.52□□□□□ -0.25
DNMT3A-215ENST00000496570 DLGAP1O14490 977 aa13.52□□□□□ -0.25
DNMT3A-215ENST00000496570 APOL3O95236 402 aa13.52□□□□□ -0.25
DNMT3A-215ENST00000496570 FSTL3O95633 263 aa13.52□□□□□ -0.25
DNMT3A-215ENST00000496570 GABRB1P18505 474 aa13.52□□□□□ -0.25
DNMT3A-215ENST00000496570 CFL1P23528 166 aaKnown RBP13.52□□□□□ -0.25
DNMT3A-215ENST00000496570 MDH2P40926 338 aaKnown RBP13.52□□□□□ -0.25
DNMT3A-215ENST00000496570 SNRPGP62308 76 aaKnown RBP13.52□□□□□ -0.25
DNMT3A-215ENST00000496570 C1orf229Q6ZS94 237 aaPredicted RBP13.52□□□□□ -0.25
DNMT3A-215ENST00000496570 KRT74Q7RTS7 529 aa13.52□□□□□ -0.25
DNMT3A-215ENST00000496570 KLBQ86Z14 1044 aa13.52□□□□□ -0.25
DNMT3A-215ENST00000496570 C11orf53Q8IXP5 236 aa13.52□□□□□ -0.25
DNMT3A-215ENST00000496570 OR51F2Q8NH61 342 aa13.52□□□□□ -0.25
DNMT3A-215ENST00000496570 TRUB1Q8WWH5 349 aaKnown RBP13.52□□□□□ -0.25
DNMT3A-215ENST00000496570 PBOV1Q9GZY1 135 aa13.52□□□□□ -0.25
DNMT3A-215ENST00000496570 PATZ1Q9HBE1 687 aaKnown RBP13.52□□□□□ -0.25
DNMT3A-215ENST00000496570 AASSQ9UDR5 926 aa13.52□□□□□ -0.25
DNMT3A-215ENST00000496570 ARHGAP32A7KAX9 2087 aa13.52□□□□□ -0.25
DNMT3A-215ENST00000496570 TRAV20A0A0B4J274 112 aa13.51□□□□□ -0.25
DNMT3A-215ENST00000496570 A0A0U1RQV5 110 aa13.51□□□□□ -0.25
DNMT3A-215ENST00000496570 A0A1W2PQL4 384 aaPredicted RBP13.51□□□□□ -0.25
DNMT3A-215ENST00000496570 CEACAM18A8MTB9 384 aa13.51□□□□□ -0.25
DNMT3A-215ENST00000496570 J3QRE1 110 aa13.51□□□□□ -0.25
DNMT3A-215ENST00000496570 ENTPD6O75354 484 aa13.51□□□□□ -0.25
DNMT3A-215ENST00000496570 AVPP01185 164 aa13.51□□□□□ -0.25
DNMT3A-215ENST00000496570 RIDAP52758 137 aaKnown RBP13.51□□□□□ -0.25
DNMT3A-215ENST00000496570 TMED1Q13445 227 aa13.51□□□□□ -0.25
DNMT3A-215ENST00000496570 PLEKHG7Q6ZR37 379 aa13.51□□□□□ -0.25
DNMT3A-215ENST00000496570 ZBTB49Q6ZSB9 765 aa13.51□□□□□ -0.25
DNMT3A-215ENST00000496570 PLPP7Q8NBV4 271 aa13.51□□□□□ -0.25
DNMT3A-215ENST00000496570 RNF166Q96A37 237 aaPredicted RBP13.51□□□□□ -0.25
DNMT3A-215ENST00000496570 ITPKCQ96DU7 683 aa13.51□□□□□ -0.25
DNMT3A-215ENST00000496570 TBX5Q99593 518 aa13.51□□□□□ -0.25
DNMT3A-215ENST00000496570 NUFIP1Q9UHK0 495 aaKnown RBP13.51□□□□□ -0.25
DNMT3A-215ENST00000496570 IKZF2Q9UKS7 526 aa13.51□□□□□ -0.25
DNMT3A-215ENST00000496570 NOP16Q9Y3C1 178 aaKnown RBP13.51□□□□□ -0.25
DNMT3A-215ENST00000496570 ORC6Q9Y5N6 252 aa13.51□□□□□ -0.25
DNMT3A-215ENST00000496570 ATRQ13535 2644 aa13.51□□□□□ -0.25
DNMT3A-215ENST00000496570 ANKRD30BLA7E2S9 258 aa13.5□□□□□ -0.25
DNMT3A-215ENST00000496570 ANKRD65E5RJM6 399 aa13.5□□□□□ -0.25
DNMT3A-215ENST00000496570 ZNF670-ZNF695F2Z2N8 137 aa13.5□□□□□ -0.25
DNMT3A-215ENST00000496570 PHYHO14832 338 aa13.5□□□□□ -0.25
DNMT3A-215ENST00000496570 CST4P01036 141 aa13.5□□□□□ -0.25
DNMT3A-215ENST00000496570 TTRP02766 147 aa13.5□□□□□ -0.25
DNMT3A-215ENST00000496570 WNT2P09544 360 aa13.5□□□□□ -0.25
DNMT3A-215ENST00000496570 ZNF85Q03923 595 aa13.5□□□□□ -0.25
DNMT3A-215ENST00000496570 EGR3Q06889 387 aa13.5□□□□□ -0.25
DNMT3A-215ENST00000496570 POU4F2Q12837 409 aa13.5□□□□□ -0.25
DNMT3A-215ENST00000496570 OCLNQ16625 522 aa13.5□□□□□ -0.25
DNMT3A-215ENST00000496570 ZNF404Q494X3 552 aa13.5□□□□□ -0.25
DNMT3A-215ENST00000496570 ZNF826PQ6ZT77 177 aa13.5□□□□□ -0.25
DNMT3A-215ENST00000496570 SPICQ8N5J4 248 aa13.5□□□□□ -0.25
DNMT3A-215ENST00000496570 SPERTQ8NA61 448 aa13.5□□□□□ -0.25
DNMT3A-215ENST00000496570 C19orf18Q8NEA5 215 aa13.5□□□□□ -0.25
DNMT3A-215ENST00000496570 CSNK2A3Q8NEV1 391 aa13.5□□□□□ -0.25
DNMT3A-215ENST00000496570 OR51E1Q8TCB6 317 aa13.5□□□□□ -0.25
DNMT3A-215ENST00000496570 TMEM246Q9BRR3 403 aa13.5□□□□□ -0.25
DNMT3A-215ENST00000496570 ZNF391Q9UJN7 358 aa13.5□□□□□ -0.25
DNMT3A-215ENST00000496570 POLR3KQ9Y2Y1 108 aaPredicted RBP13.5□□□□□ -0.25
DNMT3A-215ENST00000496570 PPIAL4EA0A075B759 164 aa13.49□□□□□ -0.25
DNMT3A-215ENST00000496570 LRRC30A6NM36 301 aa13.49□□□□□ -0.25
DNMT3A-215ENST00000496570 A8MXK9 166 aa13.49□□□□□ -0.25
DNMT3A-215ENST00000496570 PPIAL4DF5H284 164 aa13.49□□□□□ -0.25
DNMT3A-215ENST00000496570 TNFRSF13BO14836 293 aaPredicted RBP13.49□□□□□ -0.25
DNMT3A-215ENST00000496570 BAG2O95816 211 aa13.49□□□□□ -0.25
DNMT3A-215ENST00000496570 LHBP01229 141 aa13.49□□□□□ -0.25
DNMT3A-215ENST00000496570 OR2T7P0C7T2 308 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms