RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 C1orf105O95561 183 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 CD160O95971 181 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 UBTFL1P0CB47 393 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-212ENST00000496458 OCM2P0CE71 109 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 OCMP0CE72 109 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-212ENST00000496458 NPR2P20594 1047 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 CNR1P21554 472 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 FOXN2P32314 431 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 RPL5P46777 297 aaKnown RBP3.53□□□□□ -1.84
SF3B1-212ENST00000496458 GNPDA1P46926 289 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 RPL29P47914 159 aaKnown RBP3.53□□□□□ -1.84
SF3B1-212ENST00000496458 CDC34P49427 236 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-212ENST00000496458 AP2S1P53680 142 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-212ENST00000496458 PKNOX1P55347 436 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 NUP107P57740 925 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 KRTAP10-1P60331 282 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 PRPS1P60891 318 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 NAA20P61599 178 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 PON2Q15165 354 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 NDUFA9Q16795 377 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 DGUOKQ16854 277 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 LRRC36Q1X8D7 754 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 ZNF630Q2M218 657 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-212ENST00000496458 SOHLH1Q5JUK2 328 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 THEM4Q5T1C6 240 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 RESP18Q5W5W9 173 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 SPESP1Q6UW49 350 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 RIBC1Q8N443 379 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-212ENST00000496458 MS4A15Q8N5U1 240 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 CCDC71LQ8N9Z2 235 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 ZNF680Q8NEM1 530 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 OR52H1Q8NGJ2 320 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 OR2A12Q8NGT7 310 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 OR9A4Q8NGU2 314 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 LHFPL5Q8TAF8 219 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 FANK1Q8TC84 345 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 LGALS14Q8TCE9 139 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 BORCS5Q969J3 196 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 IL22RA2Q969J5 263 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 ISOC2Q96AB3 205 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 CCDC126Q96EE4 140 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 OR5B2Q96R09 309 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 ULBP2Q9BZM5 246 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 UCK2Q9BZX2 261 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 ZYG11BQ9C0D3 744 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 C6orf62Q9GZU0 229 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-212ENST00000496458 OR51B5Q9H339 312 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 PIGUQ9H490 435 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 SAV1Q9H4B6 383 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-212ENST00000496458 TMBIM4Q9HC24 238 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 ANKHQ9HCJ1 492 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 TREX1Q9NSU2 369 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 CLEC2DQ9UHP7 191 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 GNPTGQ9UJJ9 305 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 CACNG2Q9Y698 323 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 CDH10Q9Y6N8 788 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 USH1CQ9Y6N9 552 aa3.53□□□□□ -1.84
SF3B1-212ENST00000496458 COL4A1P02462 1669 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 SMIM28A0A1B0GU29 152 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 TCRBV9S1A1TA0A576 114 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 SLC22A20A6NK97 555 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 H3BMQ9 156 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 HSD17B6O14756 317 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 EIF4E2O60573 245 aaKnown RBP3.52□□□□□ -1.85
SF3B1-212ENST00000496458 SLC19A2O60779 497 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 KRT16P08779 473 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 FAM228BP0C875 321 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 ABOP16442 354 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 COX5AP20674 150 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 IVDP26440 423 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 HTR2CP28335 458 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 GDI2P50395 445 aaKnown RBP3.52□□□□□ -1.85
SF3B1-212ENST00000496458 TIMM10P62072 90 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 RPL8P62917 257 aaKnown RBP3.52□□□□□ -1.85
SF3B1-212ENST00000496458 VLDLRP98155 873 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 ZNF33AQ06730 810 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 GNMTQ14749 295 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 TNXAQ16473 311 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 DUSP7Q16829 419 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 RPEL1Q2QD12 228 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 CCDC58Q4VC31 144 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 SAMD4BQ5PRF9 694 aaKnown RBP3.52□□□□□ -1.85
SF3B1-212ENST00000496458 OR8G2PQ6IF36 304 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 C1orf94Q6P1W5 598 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 MBOAT1Q6ZNC8 495 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 ZNF621Q6ZSS3 439 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 LINC00336Q6ZUF6 198 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 OR2W3Q7Z3T1 314 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 CROCCP2Q86T23 111 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 LRRC34Q8IZ02 419 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 LIX1Q8N485 282 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 TRAM1L1Q8N609 369 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 CCNYL1Q8N7R7 359 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 OR2T33Q8NG76 320 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 OR6N2Q8NGY6 317 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 NELFBQ8WX92 580 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 SMARCD2Q92925 531 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 STMN2Q93045 179 aa3.52□□□□□ -1.85
SF3B1-212ENST00000496458 RMND5BQ96G75 393 aaPredicted RBP3.52□□□□□ -1.85
SF3B1-212ENST00000496458 RNF170Q96K19 258 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms