RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 HSD11B1P28845 292 aa11.87□□□□□ -0.51
VTI1A-209ENST00000496445 ZNF121P58317 390 aaPredicted RBP11.87□□□□□ -0.51
VTI1A-209ENST00000496445 BOLLQ8N9W6 283 aaKnown RBP11.87□□□□□ -0.51
VTI1A-209ENST00000496445 OTULINQ96BN8 352 aa11.87□□□□□ -0.51
VTI1A-209ENST00000496445 SGK3Q96BR1 496 aa11.87□□□□□ -0.51
VTI1A-209ENST00000496445 ZMYND19Q96E35 227 aaPredicted RBP11.87□□□□□ -0.51
VTI1A-209ENST00000496445 REEP6Q96HR9 211 aa11.87□□□□□ -0.51
VTI1A-209ENST00000496445 MMADHCQ9H3L0 296 aaPredicted RBP11.87□□□□□ -0.51
VTI1A-209ENST00000496445 PPP1R3EQ9H7J1 279 aa11.87□□□□□ -0.51
VTI1A-209ENST00000496445 SMURF1Q9HCE7 757 aa11.87□□□□□ -0.51
VTI1A-209ENST00000496445 MGAM2Q2M2H8 2515 aa11.86□□□□□ -0.51
VTI1A-209ENST00000496445 MDFIC2A0A1B0GVS7 189 aa11.86□□□□□ -0.51
VTI1A-209ENST00000496445 OOEPA6NGQ2 149 aa11.86□□□□□ -0.51
VTI1A-209ENST00000496445 SELENOFO60613 162 aa11.86□□□□□ -0.51
VTI1A-209ENST00000496445 LHBP01229 141 aa11.86□□□□□ -0.51
VTI1A-209ENST00000496445 GRPP07492 148 aa11.86□□□□□ -0.51
VTI1A-209ENST00000496445 PRTN3P24158 256 aa11.86□□□□□ -0.51
VTI1A-209ENST00000496445 POU1F1P28069 291 aa11.86□□□□□ -0.51
VTI1A-209ENST00000496445 SLC15A1P46059 708 aa11.86□□□□□ -0.51
VTI1A-209ENST00000496445 BAMBIQ13145 260 aa11.86□□□□□ -0.51
VTI1A-209ENST00000496445 GINS1Q14691 196 aa11.86□□□□□ -0.51
VTI1A-209ENST00000496445 OR8B8Q15620 311 aa11.86□□□□□ -0.51
VTI1A-209ENST00000496445 TIGD6Q17RP2 521 aa11.86□□□□□ -0.51
VTI1A-209ENST00000496445 PLBD1Q6P4A8 553 aa11.86□□□□□ -0.51
VTI1A-209ENST00000496445 RBMS3Q6XE24 437 aaKnown RBP11.86□□□□□ -0.51
VTI1A-209ENST00000496445 FAM57BQ71RH2 274 aa11.86□□□□□ -0.51
VTI1A-209ENST00000496445 FAM90A1Q86YD7 464 aa11.86□□□□□ -0.51
VTI1A-209ENST00000496445 C11orf53Q8IXP5 236 aa11.86□□□□□ -0.51
VTI1A-209ENST00000496445 SPERTQ8NA61 448 aa11.86□□□□□ -0.51
VTI1A-209ENST00000496445 BBS1Q8NFJ9 593 aa11.86□□□□□ -0.51
VTI1A-209ENST00000496445 TECTBQ96PL2 329 aa11.86□□□□□ -0.51
VTI1A-209ENST00000496445 MS4A7Q9GZW8 240 aaPredicted RBP11.86□□□□□ -0.51
VTI1A-209ENST00000496445 OR51V1Q9H2C8 321 aa11.86□□□□□ -0.51
VTI1A-209ENST00000496445 A6NLC8 198 aa11.85□□□□□ -0.51
VTI1A-209ENST00000496445 GYPAP02724 150 aa11.85□□□□□ -0.51
VTI1A-209ENST00000496445 RNASE1P07998 156 aaKnown RBP11.85□□□□□ -0.51
VTI1A-209ENST00000496445 HKR1P10072 659 aa11.85□□□□□ -0.51
VTI1A-209ENST00000496445 OSMP13725 252 aa11.85□□□□□ -0.51
VTI1A-209ENST00000496445 DDOSTP39656 456 aa11.85□□□□□ -0.51
VTI1A-209ENST00000496445 NPY4RP50391 375 aa11.85□□□□□ -0.51
VTI1A-209ENST00000496445 FGF12P61328 243 aa11.85□□□□□ -0.51
VTI1A-209ENST00000496445 CDK5Q00535 292 aa11.85□□□□□ -0.51
VTI1A-209ENST00000496445 SLC9A3R2Q15599 337 aa11.85□□□□□ -0.51
VTI1A-209ENST00000496445 GFOD2Q3B7J2 385 aa11.85□□□□□ -0.51
VTI1A-209ENST00000496445 TEX36Q5VZQ5 186 aa11.85□□□□□ -0.51
VTI1A-209ENST00000496445 SHFQ7M4L6 423 aa11.85□□□□□ -0.51
VTI1A-209ENST00000496445 TRPM8Q7Z2W7 1104 aa11.85□□□□□ -0.51
VTI1A-209ENST00000496445 C3orf56Q8N813 242 aa11.85□□□□□ -0.51
VTI1A-209ENST00000496445 ZNF454Q8N9F8 522 aa11.85□□□□□ -0.51
VTI1A-209ENST00000496445 OTOSQ8NHW6 89 aa11.85□□□□□ -0.51
VTI1A-209ENST00000496445 SLC7A6OSQ96CW6 309 aaPredicted RBP11.85□□□□□ -0.51
VTI1A-209ENST00000496445 ZMAT3Q9HA38 289 aaKnown RBP11.85□□□□□ -0.51
VTI1A-209ENST00000496445 KLHDC2Q9Y2U9 406 aa11.85□□□□□ -0.51
VTI1A-209ENST00000496445 IGHV3OR15-7A0A075B7D8 119 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.84□□□□□ -0.51
VTI1A-209ENST00000496445 A0A1B0GW55 424 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 hCG_1807616A0A1W2PRN6 198 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 TCRBV3S1A0A5B6 114 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 ANKRD30BLA7E2S9 258 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 PRR23D1E9PI22 279 aaPredicted RBP11.84□□□□□ -0.51
VTI1A-209ENST00000496445 GNGT2O14610 69 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 PRODHO43272 600 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 ADAM20O43506 726 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 ENSAO43768 121 aaKnown RBP11.84□□□□□ -0.51
VTI1A-209ENST00000496445 LYNP07948 512 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 SFTPBP07988 381 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 DUX4L2P0CJ85 424 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 DUX4L3P0CJ86 424 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 DUX4L4P0CJ87 422 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 DUX4L5P0CJ88 424 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 DUX4L6P0CJ89 424 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 DUX4L7P0CJ90 424 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 PRR23D2P0DMB1 279 aaPredicted RBP11.84□□□□□ -0.51
VTI1A-209ENST00000496445 MMP9P14780 707 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 PAICSP22234 425 aaKnown RBP11.84□□□□□ -0.51
VTI1A-209ENST00000496445 PRKACGP22612 351 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 SLC2A5P22732 501 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 ACKR3P25106 362 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 CFHR2P36980 270 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 NAA10P41227 235 aaPredicted RBP11.84□□□□□ -0.51
VTI1A-209ENST00000496445 GSK3AP49840 483 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 CSNK2BP67870 215 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 ELF3P78545 371 aaPredicted RBP11.84□□□□□ -0.51
VTI1A-209ENST00000496445 CBX1P83916 185 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 FLOT2Q14254 428 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 KCNJ8Q15842 424 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 DUX4L9Q6RFH8 374 aaPredicted RBP11.84□□□□□ -0.51
VTI1A-209ENST00000496445 BRD3OSQ6XYD6 125 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 RHOUQ7L0Q8 258 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 SPATA24Q86W54 205 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 OR52H1Q8NGJ2 320 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 OR8S1Q8NH09 359 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 OR10A2Q9H208 303 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 BRD7Q9NPI1 651 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 C14orf119Q9NWQ9 140 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 FAM53CQ9NYF3 392 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 ERVK-18Q9QC07 812 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 DUX4Q9UBX2 424 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 RHBDD3Q9Y3P4 386 aa11.84□□□□□ -0.51
VTI1A-209ENST00000496445 TRAV38-1A0A0B4J264 116 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms