RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 FPR2P25090 351 aa13.14□□□□□ -0.31
HDAC4-213ENST00000496347 FAM3AP98173 230 aa13.14□□□□□ -0.31
HDAC4-213ENST00000496347 PAX2Q02962 417 aa13.14□□□□□ -0.31
HDAC4-213ENST00000496347 KLHL12Q53G59 568 aa13.14□□□□□ -0.31
HDAC4-213ENST00000496347 LRRN1Q6UXK5 716 aa13.14□□□□□ -0.31
HDAC4-213ENST00000496347 FAM57BQ71RH2 274 aa13.14□□□□□ -0.31
HDAC4-213ENST00000496347 CPOQ8IVL8 374 aa13.14□□□□□ -0.31
HDAC4-213ENST00000496347 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.14□□□□□ -0.31
HDAC4-213ENST00000496347 CSNK2A3Q8NEV1 391 aa13.14□□□□□ -0.31
HDAC4-213ENST00000496347 OR8S1Q8NH09 359 aa13.14□□□□□ -0.31
HDAC4-213ENST00000496347 UTP4Q969X6 686 aaKnown RBP13.14□□□□□ -0.31
HDAC4-213ENST00000496347 AMELYQ99218 206 aa13.14□□□□□ -0.31
HDAC4-213ENST00000496347 MMADHCQ9H3L0 296 aaPredicted RBP13.14□□□□□ -0.31
HDAC4-213ENST00000496347 NIPAL2Q9H841 368 aa13.14□□□□□ -0.31
HDAC4-213ENST00000496347 NTN4Q9HB63 628 aa13.14□□□□□ -0.31
HDAC4-213ENST00000496347 DNAJC27Q9NZQ0 273 aa13.14□□□□□ -0.31
HDAC4-213ENST00000496347 CLN8Q9UBY8 286 aa13.14□□□□□ -0.31
HDAC4-213ENST00000496347 A6NLC8 198 aa13.13□□□□□ -0.31
HDAC4-213ENST00000496347 TRIM77I1YAP6 450 aa13.13□□□□□ -0.31
HDAC4-213ENST00000496347 LGALS8O00214 317 aa13.13□□□□□ -0.31
HDAC4-213ENST00000496347 TIPRLO75663 272 aa13.13□□□□□ -0.31
HDAC4-213ENST00000496347 ATP5HO75947 161 aa13.13□□□□□ -0.31
HDAC4-213ENST00000496347 PRKACGP22612 351 aa13.13□□□□□ -0.31
HDAC4-213ENST00000496347 PSMB10P40306 273 aa13.13□□□□□ -0.31
HDAC4-213ENST00000496347 NAA10P41227 235 aaPredicted RBP13.13□□□□□ -0.31
HDAC4-213ENST00000496347 NPY4RP50391 375 aa13.13□□□□□ -0.31
HDAC4-213ENST00000496347 RPS7P62081 194 aaKnown RBP13.13□□□□□ -0.31
HDAC4-213ENST00000496347 PAX8Q06710 450 aa13.13□□□□□ -0.31
HDAC4-213ENST00000496347 OR8B8Q15620 311 aa13.13□□□□□ -0.31
HDAC4-213ENST00000496347 ATP6AP1Q15904 470 aa13.13□□□□□ -0.31
HDAC4-213ENST00000496347 TUSC1Q2TAM9 212 aa13.13□□□□□ -0.31
HDAC4-213ENST00000496347 FAM201AQ5SY85 155 aa13.13□□□□□ -0.31
HDAC4-213ENST00000496347 LCN1P1Q5VSP4 162 aa13.13□□□□□ -0.31
HDAC4-213ENST00000496347 FAM216AQ8WUB2 273 aa13.13□□□□□ -0.31
HDAC4-213ENST00000496347 DVL3Q92997 716 aaPredicted RBP13.13□□□□□ -0.31
HDAC4-213ENST00000496347 ABCB9Q9NP78 766 aa13.13□□□□□ -0.31
HDAC4-213ENST00000496347 NUP50Q9UKX7 468 aa13.13□□□□□ -0.31
HDAC4-213ENST00000496347 N6AMT1Q9Y5N5 214 aa13.13□□□□□ -0.31
HDAC4-213ENST00000496347 TRAV38-1A0A0B4J264 116 aa13.12□□□□□ -0.31
HDAC4-213ENST00000496347 OOEPA6NGQ2 149 aa13.12□□□□□ -0.31
HDAC4-213ENST00000496347 RGS9O75916 674 aaPredicted RBP13.12□□□□□ -0.31
HDAC4-213ENST00000496347 FCGR1AP12314 374 aa13.12□□□□□ -0.31
HDAC4-213ENST00000496347 GNALP38405 381 aa13.12□□□□□ -0.31
HDAC4-213ENST00000496347 ESRRGP62508 458 aa13.12□□□□□ -0.31
HDAC4-213ENST00000496347 ACTG1P63261 375 aa13.12□□□□□ -0.31
HDAC4-213ENST00000496347 GFOD2Q3B7J2 385 aa13.12□□□□□ -0.31
HDAC4-213ENST00000496347 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.12□□□□□ -0.31
HDAC4-213ENST00000496347 BBS1Q8NFJ9 593 aa13.12□□□□□ -0.31
HDAC4-213ENST00000496347 OR5K1Q8NHB7 308 aa13.12□□□□□ -0.31
HDAC4-213ENST00000496347 RAB40AQ8WXH6 277 aa13.12□□□□□ -0.31
HDAC4-213ENST00000496347 SGK3Q96BR1 496 aa13.12□□□□□ -0.31
HDAC4-213ENST00000496347 UPRTQ96BW1 309 aa13.12□□□□□ -0.31
HDAC4-213ENST00000496347 PGAM5Q96HS1 289 aa13.12□□□□□ -0.31
HDAC4-213ENST00000496347 PAPOLGQ9BWT3 736 aaKnown RBP13.12□□□□□ -0.31
HDAC4-213ENST00000496347 YIPF3Q9GZM5 350 aa13.12□□□□□ -0.31
HDAC4-213ENST00000496347 ZMAT3Q9HA38 289 aaKnown RBP13.12□□□□□ -0.31
HDAC4-213ENST00000496347 C1orf123Q9NWV4 160 aa13.12□□□□□ -0.31
HDAC4-213ENST00000496347 ENOPH1Q9UHY7 261 aa13.12□□□□□ -0.31
HDAC4-213ENST00000496347 LAMP5Q9UJQ1 280 aa13.12□□□□□ -0.31
HDAC4-213ENST00000496347 hCG_1807616A0A1W2PRN6 198 aa13.11□□□□□ -0.31
HDAC4-213ENST00000496347 NDUFA2O43678 99 aa13.11□□□□□ -0.31
HDAC4-213ENST00000496347 ENSAO43768 121 aaKnown RBP13.11□□□□□ -0.31
HDAC4-213ENST00000496347 GSK3AP49840 483 aa13.11□□□□□ -0.31
HDAC4-213ENST00000496347 CRISP1P54107 249 aa13.11□□□□□ -0.31
HDAC4-213ENST00000496347 IL5RAQ01344 420 aa13.11□□□□□ -0.31
HDAC4-213ENST00000496347 APOFQ13790 326 aa13.11□□□□□ -0.31
HDAC4-213ENST00000496347 SNAPC1Q16533 368 aa13.11□□□□□ -0.31
HDAC4-213ENST00000496347 KLF17Q5JT82 389 aaPredicted RBP13.11□□□□□ -0.31
HDAC4-213ENST00000496347 C1orf146Q5VVC0 180 aa13.11□□□□□ -0.31
HDAC4-213ENST00000496347 WDR25Q64LD2 544 aaPredicted RBP13.11□□□□□ -0.31
HDAC4-213ENST00000496347 RBMS3Q6XE24 437 aaKnown RBP13.11□□□□□ -0.31
HDAC4-213ENST00000496347 THEM6Q8WUY1 208 aa13.11□□□□□ -0.31
HDAC4-213ENST00000496347 ITFG2Q969R8 447 aa13.11□□□□□ -0.31
HDAC4-213ENST00000496347 GABARAPL1Q9H0R8 117 aa13.11□□□□□ -0.31
HDAC4-213ENST00000496347 KRT84Q9NSB2 600 aa13.11□□□□□ -0.31
HDAC4-213ENST00000496347 KLHDC2Q9Y2U9 406 aa13.11□□□□□ -0.31
HDAC4-213ENST00000496347 LRP12Q9Y561 859 aa13.11□□□□□ -0.31
HDAC4-213ENST00000496347 CCDC182A6NF36 153 aa13.1□□□□□ -0.31
HDAC4-213ENST00000496347 ANXA2P2A6NMY6 339 aa13.1□□□□□ -0.31
HDAC4-213ENST00000496347 C3orf80F5H4A9 247 aa13.1□□□□□ -0.31
HDAC4-213ENST00000496347 GRPP07492 148 aa13.1□□□□□ -0.31
HDAC4-213ENST00000496347 ALOX5APP20292 161 aa13.1□□□□□ -0.31
HDAC4-213ENST00000496347 CD80P33681 288 aa13.1□□□□□ -0.31
HDAC4-213ENST00000496347 PTGES3Q15185 160 aaKnown RBP13.1□□□□□ -0.31
HDAC4-213ENST00000496347 C11orf91Q3C1V1 193 aa13.1□□□□□ -0.31
HDAC4-213ENST00000496347 TMEM236Q5W0B7 351 aa13.1□□□□□ -0.31
HDAC4-213ENST00000496347 KCTD18Q6PI47 426 aaPredicted RBP13.1□□□□□ -0.31
HDAC4-213ENST00000496347 DEGS2Q6QHC5 323 aa13.1□□□□□ -0.31
HDAC4-213ENST00000496347 C9orf139Q6ZV77 190 aa13.1□□□□□ -0.31
HDAC4-213ENST00000496347 DOK3Q7L591 496 aa13.1□□□□□ -0.31
HDAC4-213ENST00000496347 TECTBQ96PL2 329 aa13.1□□□□□ -0.31
HDAC4-213ENST00000496347 CNN2Q99439 309 aaKnown RBP13.1□□□□□ -0.31
HDAC4-213ENST00000496347 NUDT16L1Q9BRJ7 211 aaKnown RBP13.1□□□□□ -0.31
HDAC4-213ENST00000496347 TLNRD1Q9H1K6 362 aa13.1□□□□□ -0.31
HDAC4-213ENST00000496347 RNPEPL1Q9HAU8 725 aa13.1□□□□□ -0.31
HDAC4-213ENST00000496347 BRD7Q9NPI1 651 aa13.1□□□□□ -0.31
HDAC4-213ENST00000496347 TVP23BQ9NYZ1 205 aa13.1□□□□□ -0.31
HDAC4-213ENST00000496347 ZNF319Q9P2F9 582 aa13.1□□□□□ -0.31
HDAC4-213ENST00000496347 MPC1Q9Y5U8 109 aa13.1□□□□□ -0.31
HDAC4-213ENST00000496347 TMEM14AQ9Y6G1 99 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms