RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 RNF13O43567 381 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 OR6A2O95222 327 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 CH25HO95992 272 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 IGHV1-46P01743 117 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 IDO1P14902 403 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 ETS2P15036 469 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 AQP1P29972 269 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 MPV17P39210 176 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 RGS8P57771 180 aaPredicted RBP4.31□□□□□ -1.72
PTCD3-219ENST00000494323 SEC61A1P61619 476 aaKnown RBP4.31□□□□□ -1.72
PTCD3-219ENST00000494323 VSNL1P62760 191 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 MELKQ14680 651 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 SLC9A3R2Q15599 337 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 MOGQ16653 247 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 KRT71Q3SY84 523 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 ZNF260Q3ZCT1 412 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 TMEM255AQ5JRV8 349 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 KLF17Q5JT82 389 aaPredicted RBP4.31□□□□□ -1.72
PTCD3-219ENST00000494323 CEP85LQ5SZL2 805 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 AWAT2Q6E213 333 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 DHRS7BQ6IAN0 325 aaPredicted RBP4.31□□□□□ -1.72
PTCD3-219ENST00000494323 REEP3Q6NUK4 255 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 C8orf82Q6P1X6 216 aaPredicted RBP4.31□□□□□ -1.72
PTCD3-219ENST00000494323 TMEM53Q6P2H8 277 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 LEG1Q6P5S2 330 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 C5orf46Q6UWT4 87 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 SLC16A14Q7RTX9 510 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 ZNF101Q8IZC7 436 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 PRR26Q8N8Z3 221 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 SMYD1Q8NB12 490 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 SYT14Q8NB59 555 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 CSNK2A3Q8NEV1 391 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 OR1J1Q8NGS3 322 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 OR5J2Q8NH18 312 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 OR6X1Q8NH79 312 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 BBS10Q8TAM1 723 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 ST7LQ8TDW4 575 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 GEMIN6Q8WXD5 167 aaKnown RBP4.31□□□□□ -1.72
PTCD3-219ENST00000494323 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.31□□□□□ -1.72
PTCD3-219ENST00000494323 GTF2H4Q92759 462 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 EPYCQ99645 322 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 LRMDAQ9H2I8 198 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 KCNK15Q9H427 330 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 RMND5AQ9H871 391 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 C12orf10Q9HB07 376 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 A4GALTQ9NPC4 353 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 TNFRSF19Q9NS68 423 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 TMEM38BQ9NVV0 291 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 DCAF16Q9NXF7 216 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 THUMPD1Q9NXG2 353 aaKnown RBP4.31□□□□□ -1.72
PTCD3-219ENST00000494323 MRPL39Q9NYK5 338 aaKnown RBP4.31□□□□□ -1.72
PTCD3-219ENST00000494323 SLC25A37Q9NYZ2 338 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 NUP50Q9UKX7 468 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 AUP1Q9Y679 476 aa4.31□□□□□ -1.72
PTCD3-219ENST00000494323 PLSCR5A0PG75 271 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 C5orf49A4QMS7 147 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 CPSF4LA6NMK7 179 aaKnown RBP4.3□□□□□ -1.72
PTCD3-219ENST00000494323 FAM90A26D6RGX4 464 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 BLOC1S5-TXNDC5H3BN57 136 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 KPNA4O00629 521 aaPredicted RBP4.3□□□□□ -1.72
PTCD3-219ENST00000494323 TM9SF1O15321 606 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 FARS2O95363 451 aaKnown RBP4.3□□□□□ -1.72
PTCD3-219ENST00000494323 NGFP01138 241 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 IGHV3-13P01766 116 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 THY1P04216 161 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 UMPSP11172 480 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 MDKP21741 143 aaPredicted RBP4.3□□□□□ -1.72
PTCD3-219ENST00000494323 STOMP27105 288 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 C21orf33P30042 268 aaPredicted RBP4.3□□□□□ -1.72
PTCD3-219ENST00000494323 APLNRP35414 380 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 MMP15P51511 669 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 NCALDP61601 193 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 CDK6Q00534 326 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 HSF2Q03933 536 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 ZNF154Q13106 437 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 SGCAQ16586 387 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 DUSP7Q16829 419 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 TBC1D28Q2M2D7 210 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 ZNF718Q3SXZ3 478 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 SLC36A2Q495M3 483 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 FAM98BQ52LJ0 330 aaKnown RBP4.3□□□□□ -1.72
PTCD3-219ENST00000494323 ARMCX4Q5H9R4 360 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 PABPC1L2AQ5JQF8 200 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 PAPPA-AS1Q5QFB9 102 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 GCNT6Q5T4J0 391 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 HHATQ5VTY9 493 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 CST9LP1Q5W188 147 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 FAM91A1Q658Y4 838 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 KCTD18Q6PI47 426 aaPredicted RBP4.3□□□□□ -1.72
PTCD3-219ENST00000494323 DHRS4L2Q6PKH6 230 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 C9orf47Q6ZRZ4 202 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 CCDC190Q86UF4 302 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 RBM45Q8IUH3 476 aaKnown RBP4.3□□□□□ -1.72
PTCD3-219ENST00000494323 MSRB3Q8IXL7 192 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 DEFB108BQ8NET1 73 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 OR6S1Q8NH40 331 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 AKR7LQ8NHP1 331 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 SLC25A40Q8TBP6 338 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 AENQ8WTP8 325 aaKnown RBP4.3□□□□□ -1.72
PTCD3-219ENST00000494323 HIST1H2ACQ93077 130 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms