RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 CDK5R1Q15078 307 aa12.44□□□□□ -0.42
BRCA1-223ENST00000494123 OR8B8Q15620 311 aa12.44□□□□□ -0.42
BRCA1-223ENST00000494123 TBCEQ15813 527 aaPredicted RBP12.44□□□□□ -0.42
BRCA1-223ENST00000494123 XAF1Q6GPH4 301 aa12.44□□□□□ -0.42
BRCA1-223ENST00000494123 DOK3Q7L591 496 aa12.44□□□□□ -0.42
BRCA1-223ENST00000494123 CSNK2A3Q8NEV1 391 aa12.44□□□□□ -0.42
BRCA1-223ENST00000494123 SEMA6DQ8NFY4 1073 aa12.44□□□□□ -0.42
BRCA1-223ENST00000494123 OR5M11Q96RB7 305 aa12.44□□□□□ -0.42
BRCA1-223ENST00000494123 SOX7Q9BT81 388 aa12.44□□□□□ -0.42
BRCA1-223ENST00000494123 PLEKHA1Q9HB21 404 aa12.44□□□□□ -0.42
BRCA1-223ENST00000494123 MSL2Q9HCI7 577 aa12.44□□□□□ -0.42
BRCA1-223ENST00000494123 ANKRD17O75179 2603 aaKnown RBP12.44□□□□□ -0.42
BRCA1-223ENST00000494123 SPG11Q96JI7 2443 aa12.43□□□□□ -0.42
BRCA1-223ENST00000494123 OR4C45A6NMZ5 311 aa12.43□□□□□ -0.42
BRCA1-223ENST00000494123 LALBAP00709 142 aa12.43□□□□□ -0.42
BRCA1-223ENST00000494123 IGLV3-1P01715 115 aa12.43□□□□□ -0.42
BRCA1-223ENST00000494123 RPSAP08865 295 aaKnown RBP12.43□□□□□ -0.42
BRCA1-223ENST00000494123 HSMCR30P0CW71 290 aa12.43□□□□□ -0.42
BRCA1-223ENST00000494123 ATP6V1B1P15313 513 aa12.43□□□□□ -0.42
BRCA1-223ENST00000494123 ZNF12P17014 697 aa12.43□□□□□ -0.42
BRCA1-223ENST00000494123 ZNF773Q6PK81 442 aa12.43□□□□□ -0.42
BRCA1-223ENST00000494123 CDH24Q86UP0 819 aa12.43□□□□□ -0.42
BRCA1-223ENST00000494123 RDH10Q8IZV5 341 aa12.43□□□□□ -0.42
BRCA1-223ENST00000494123 ZFP41Q8N8Y5 198 aa12.43□□□□□ -0.42
BRCA1-223ENST00000494123 NINJ1Q92982 152 aa12.43□□□□□ -0.42
BRCA1-223ENST00000494123 ITFG2Q969R8 447 aa12.43□□□□□ -0.42
BRCA1-223ENST00000494123 SMIM19Q96E16 107 aa12.43□□□□□ -0.42
BRCA1-223ENST00000494123 TRMT61AQ96FX7 289 aaKnown RBP12.43□□□□□ -0.42
BRCA1-223ENST00000494123 RAB1BQ9H0U4 201 aa12.43□□□□□ -0.42
BRCA1-223ENST00000494123 TPK1Q9H3S4 243 aa12.43□□□□□ -0.42
BRCA1-223ENST00000494123 TMEM100Q9NV29 134 aa12.43□□□□□ -0.42
BRCA1-223ENST00000494123 MRPL15Q9P015 296 aaKnown RBP12.43□□□□□ -0.42
BRCA1-223ENST00000494123 LSM2Q9Y333 95 aaKnown RBP12.43□□□□□ -0.42
BRCA1-223ENST00000494123 A0A1B0GTI1 187 aa12.42□□□□□ -0.42
BRCA1-223ENST00000494123 PNMA8CA0A1B0GUJ8 204 aa12.42□□□□□ -0.42
BRCA1-223ENST00000494123 LOC390937A0A1W2PQ73 354 aa12.42□□□□□ -0.42
BRCA1-223ENST00000494123 ZSCAN5BA6NJL1 495 aa12.42□□□□□ -0.42
BRCA1-223ENST00000494123 C17orf100A8MU93 164 aa12.42□□□□□ -0.42
BRCA1-223ENST00000494123 H7C417 338 aa12.42□□□□□ -0.42
BRCA1-223ENST00000494123 OVOL3O00110 214 aa12.42□□□□□ -0.42
BRCA1-223ENST00000494123 OGG1O15527 345 aa12.42□□□□□ -0.42
BRCA1-223ENST00000494123 SPRY3O43610 288 aa12.42□□□□□ -0.42
BRCA1-223ENST00000494123 ZFPL1O95159 310 aa12.42□□□□□ -0.42
BRCA1-223ENST00000494123 ISG15P05161 165 aa12.42□□□□□ -0.42
BRCA1-223ENST00000494123 ACHEP22303 614 aa12.42□□□□□ -0.42
BRCA1-223ENST00000494123 CCL1P22362 96 aa12.42□□□□□ -0.42
BRCA1-223ENST00000494123 GNALP38405 381 aa12.42□□□□□ -0.42
BRCA1-223ENST00000494123 BDH1Q02338 343 aa12.42□□□□□ -0.42
BRCA1-223ENST00000494123 SLC3A1Q07837 685 aa12.42□□□□□ -0.42
BRCA1-223ENST00000494123 RIPPLY1Q0D2K3 151 aa12.42□□□□□ -0.42
BRCA1-223ENST00000494123 SPARTQ8N0X7 666 aa12.42□□□□□ -0.42
BRCA1-223ENST00000494123 ZCCHC24Q8N2G6 241 aaKnown RBP12.42□□□□□ -0.42
BRCA1-223ENST00000494123 CCDC54Q8NEL0 328 aa12.42□□□□□ -0.42
BRCA1-223ENST00000494123 OR13G1Q8NGZ3 307 aa12.42□□□□□ -0.42
BRCA1-223ENST00000494123 IGFBPL1Q8WX77 278 aa12.42□□□□□ -0.42
BRCA1-223ENST00000494123 GTF3AQ92664 365 aaKnown RBP12.42□□□□□ -0.42
BRCA1-223ENST00000494123 PDCD1LG2Q9BQ51 273 aa12.42□□□□□ -0.42
BRCA1-223ENST00000494123 PAPOLGQ9BWT3 736 aaKnown RBP12.42□□□□□ -0.42
BRCA1-223ENST00000494123 ACOT13Q9NPJ3 140 aa12.42□□□□□ -0.42
BRCA1-223ENST00000494123 ZDHHC8Q9ULC8 765 aa12.42□□□□□ -0.42
BRCA1-223ENST00000494123 HHLA2Q9UM44 414 aa12.42□□□□□ -0.42
BRCA1-223ENST00000494123 PIGLQ9Y2B2 252 aa12.42□□□□□ -0.42
BRCA1-223ENST00000494123 POLQO75417 2590 aa12.42□□□□□ -0.42
BRCA1-223ENST00000494123 ARFGEF3Q5TH69 2177 aa12.42□□□□□ -0.42
BRCA1-223ENST00000494123 TPD52L2O43399 206 aaKnown RBP12.41□□□□□ -0.42
BRCA1-223ENST00000494123 LILRA1O75019 489 aa12.41□□□□□ -0.42
BRCA1-223ENST00000494123 CELP19835 753 aa12.41□□□□□ -0.42
BRCA1-223ENST00000494123 CA6P23280 308 aa12.41□□□□□ -0.42
BRCA1-223ENST00000494123 TNFSF4P23510 183 aa12.41□□□□□ -0.42
BRCA1-223ENST00000494123 ACKR3P25106 362 aa12.41□□□□□ -0.42
BRCA1-223ENST00000494123 EMX1Q04741 257 aaPredicted RBP12.41□□□□□ -0.42
BRCA1-223ENST00000494123 ACSM1Q08AH1 577 aa12.41□□□□□ -0.42
BRCA1-223ENST00000494123 Q6ZR03 302 aa12.41□□□□□ -0.42
BRCA1-223ENST00000494123 ZNF367Q7RTV3 350 aa12.41□□□□□ -0.42
BRCA1-223ENST00000494123 PLPP7Q8NBV4 271 aa12.41□□□□□ -0.42
BRCA1-223ENST00000494123 OR2Z1Q8NG97 314 aa12.41□□□□□ -0.42
BRCA1-223ENST00000494123 TSEN15Q8WW01 171 aaKnown RBP12.41□□□□□ -0.42
BRCA1-223ENST00000494123 ELMOD3Q96FG2 381 aa12.41□□□□□ -0.42
BRCA1-223ENST00000494123 NR1H4Q96RI1 486 aaPredicted RBP12.41□□□□□ -0.42
BRCA1-223ENST00000494123 DIRC2Q96SL1 478 aa12.41□□□□□ -0.42
BRCA1-223ENST00000494123 SLC30A2Q9BRI3 323 aa12.41□□□□□ -0.42
BRCA1-223ENST00000494123 SLC22A4Q9H015 551 aa12.41□□□□□ -0.42
BRCA1-223ENST00000494123 ENPP5Q9UJA9 477 aa12.41□□□□□ -0.42
BRCA1-223ENST00000494123 NOP16Q9Y3C1 178 aaKnown RBP12.41□□□□□ -0.42
BRCA1-223ENST00000494123 SIRT4Q9Y6E7 314 aaPredicted RBP12.41□□□□□ -0.42
BRCA1-223ENST00000494123 V9GYS6 101 aa12.41□□□□□ -0.42
BRCA1-223ENST00000494123 ITPR2Q14571 2701 aa12.41□□□□□ -0.42
BRCA1-223ENST00000494123 ZNF816-ZNF321PA0A0X1KG74 233 aa12.4□□□□□ -0.42
BRCA1-223ENST00000494123 FAHP16930 419 aa12.4□□□□□ -0.42
BRCA1-223ENST00000494123 TNK1Q13470 666 aa12.4□□□□□ -0.42
BRCA1-223ENST00000494123 OR8G1Q15617 311 aa12.4□□□□□ -0.42
BRCA1-223ENST00000494123 TSTQ16762 297 aaKnown RBP12.4□□□□□ -0.42
BRCA1-223ENST00000494123 PCGF3Q3KNV8 242 aa12.4□□□□□ -0.42
BRCA1-223ENST00000494123 DMKNQ6E0U4 476 aaPredicted RBP12.4□□□□□ -0.42
BRCA1-223ENST00000494123 TSPAN14Q8NG11 270 aa12.4□□□□□ -0.42
BRCA1-223ENST00000494123 OR10AD1Q8NGE0 317 aa12.4□□□□□ -0.42
BRCA1-223ENST00000494123 OR13C3Q8NGS6 347 aa12.4□□□□□ -0.42
BRCA1-223ENST00000494123 OR14K1Q8NGZ2 314 aa12.4□□□□□ -0.42
BRCA1-223ENST00000494123 RPS4Y2Q8TD47 263 aa12.4□□□□□ -0.42
BRCA1-223ENST00000494123 GHSRQ92847 366 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms