RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 OSMP13725 252 aa8.11□□□□□ -1.11
UFD1-210ENST00000494054 EGR1P18146 543 aa8.11□□□□□ -1.11
UFD1-210ENST00000494054 PRTN3P24158 256 aa8.11□□□□□ -1.11
UFD1-210ENST00000494054 HSD11B1P28845 292 aa8.11□□□□□ -1.11
UFD1-210ENST00000494054 DDOSTP39656 456 aa8.11□□□□□ -1.11
UFD1-210ENST00000494054 OPRL1P41146 370 aa8.11□□□□□ -1.11
UFD1-210ENST00000494054 GSK3AP49840 483 aa8.11□□□□□ -1.11
UFD1-210ENST00000494054 ZNF121P58317 390 aaPredicted RBP8.11□□□□□ -1.11
UFD1-210ENST00000494054 CBX1P83916 185 aa8.11□□□□□ -1.11
UFD1-210ENST00000494054 CDK5Q00535 292 aa8.11□□□□□ -1.11
UFD1-210ENST00000494054 POU4F2Q12837 409 aa8.11□□□□□ -1.11
UFD1-210ENST00000494054 BAMBIQ13145 260 aa8.11□□□□□ -1.11
UFD1-210ENST00000494054 TIGD6Q17RP2 521 aa8.11□□□□□ -1.11
UFD1-210ENST00000494054 AWAT1Q58HT5 328 aa8.11□□□□□ -1.11
UFD1-210ENST00000494054 TMEM236Q5W0B7 351 aa8.11□□□□□ -1.11
UFD1-210ENST00000494054 RBMS3Q6XE24 437 aaKnown RBP8.11□□□□□ -1.11
UFD1-210ENST00000494054 NLRC3Q7RTR2 1065 aa8.11□□□□□ -1.11
UFD1-210ENST00000494054 SPATA24Q86W54 205 aa8.11□□□□□ -1.11
UFD1-210ENST00000494054 CPOQ8IVL8 374 aa8.11□□□□□ -1.11
UFD1-210ENST00000494054 SPERTQ8NA61 448 aa8.11□□□□□ -1.11
UFD1-210ENST00000494054 BBS1Q8NFJ9 593 aa8.11□□□□□ -1.11
UFD1-210ENST00000494054 REEP6Q96HR9 211 aa8.11□□□□□ -1.11
UFD1-210ENST00000494054 MS4A7Q9GZW8 240 aaPredicted RBP8.11□□□□□ -1.11
UFD1-210ENST00000494054 TOR3AQ9H497 397 aa8.11□□□□□ -1.11
UFD1-210ENST00000494054 OPA3Q9H6K4 179 aa8.11□□□□□ -1.11
UFD1-210ENST00000494054 SMURF1Q9HCE7 757 aa8.11□□□□□ -1.11
UFD1-210ENST00000494054 BRD7Q9NPI1 651 aa8.11□□□□□ -1.11
UFD1-210ENST00000494054 FAM53CQ9NYF3 392 aa8.11□□□□□ -1.11
UFD1-210ENST00000494054 KLHDC2Q9Y2U9 406 aa8.11□□□□□ -1.11
UFD1-210ENST00000494054 NOP16Q9Y3C1 178 aaKnown RBP8.11□□□□□ -1.11
UFD1-210ENST00000494054 DOCK11Q5JSL3 2073 aa8.1□□□□□ -1.11
UFD1-210ENST00000494054 IGHV3OR15-7A0A075B7D8 119 aa8.1□□□□□ -1.11
UFD1-210ENST00000494054 TRAV40A0A0B4J280 105 aa8.1□□□□□ -1.11
UFD1-210ENST00000494054 hCG_38984A0A1B0GV85 526 aa8.1□□□□□ -1.11
UFD1-210ENST00000494054 MDFIC2A0A1B0GVS7 189 aa8.1□□□□□ -1.11
UFD1-210ENST00000494054 TCRBV3S1A0A5B6 114 aa8.1□□□□□ -1.11
UFD1-210ENST00000494054 OOEPA6NGQ2 149 aa8.1□□□□□ -1.11
UFD1-210ENST00000494054 A6NLC8 198 aa8.1□□□□□ -1.11
UFD1-210ENST00000494054 ANKRD30BLA7E2S9 258 aa8.1□□□□□ -1.11
UFD1-210ENST00000494054 PRR23D1E9PI22 279 aaPredicted RBP8.1□□□□□ -1.11
UFD1-210ENST00000494054 PHYHO14832 338 aa8.1□□□□□ -1.11
UFD1-210ENST00000494054 GYG2O15488 501 aa8.1□□□□□ -1.11
UFD1-210ENST00000494054 ADAM20O43506 726 aa8.1□□□□□ -1.11
UFD1-210ENST00000494054 FKBP6O75344 327 aa8.1□□□□□ -1.11
UFD1-210ENST00000494054 E2F6O75461 281 aa8.1□□□□□ -1.11
UFD1-210ENST00000494054 GYPAP02724 150 aa8.1□□□□□ -1.11
UFD1-210ENST00000494054 HMGN1P05114 100 aa8.1□□□□□ -1.11
UFD1-210ENST00000494054 H2BFMP0C1H6 154 aa8.1□□□□□ -1.11
UFD1-210ENST00000494054 PRR23D2P0DMB1 279 aaPredicted RBP8.1□□□□□ -1.11
UFD1-210ENST00000494054 NAA10P41227 235 aaPredicted RBP8.1□□□□□ -1.11
UFD1-210ENST00000494054 HCCSP53701 268 aa8.1□□□□□ -1.11
UFD1-210ENST00000494054 FGF12P61328 243 aa8.1□□□□□ -1.11
UFD1-210ENST00000494054 ELF3P78545 371 aaPredicted RBP8.1□□□□□ -1.11
UFD1-210ENST00000494054 FLOT2Q14254 428 aa8.1□□□□□ -1.11
UFD1-210ENST00000494054 OR8B8Q15620 311 aa8.1□□□□□ -1.11
UFD1-210ENST00000494054 GFOD2Q3B7J2 385 aa8.1□□□□□ -1.11
UFD1-210ENST00000494054 BRD3OSQ6XYD6 125 aa8.1□□□□□ -1.11
UFD1-210ENST00000494054 C9orf139Q6ZV77 190 aa8.1□□□□□ -1.11
UFD1-210ENST00000494054 SHFQ7M4L6 423 aa8.1□□□□□ -1.11
UFD1-210ENST00000494054 FAM90A1Q86YD7 464 aa8.1□□□□□ -1.11
UFD1-210ENST00000494054 C3orf56Q8N813 242 aa8.1□□□□□ -1.11
UFD1-210ENST00000494054 PAPD5Q8NDF8 572 aaKnown RBP8.1□□□□□ -1.11
UFD1-210ENST00000494054 OR52H1Q8NGJ2 320 aa8.1□□□□□ -1.11
UFD1-210ENST00000494054 OR8S1Q8NH09 359 aa8.1□□□□□ -1.11
UFD1-210ENST00000494054 OTOSQ8NHW6 89 aa8.1□□□□□ -1.11
UFD1-210ENST00000494054 TAF15Q92804 592 aaKnown RBP eCLIP8.1□□□□□ -1.11
UFD1-210ENST00000494054 SEH1LQ96EE3 360 aa8.1□□□□□ -1.11
UFD1-210ENST00000494054 PGAM5Q96HS1 289 aa8.1□□□□□ -1.11
UFD1-210ENST00000494054 MMADHCQ9H3L0 296 aaPredicted RBP8.1□□□□□ -1.11
UFD1-210ENST00000494054 C14orf119Q9NWQ9 140 aa8.1□□□□□ -1.11
UFD1-210ENST00000494054 DNAJB9Q9UBS3 223 aa8.1□□□□□ -1.11
UFD1-210ENST00000494054 POMPQ9Y244 141 aa8.1□□□□□ -1.11
UFD1-210ENST00000494054 RHBDD3Q9Y3P4 386 aa8.1□□□□□ -1.11
UFD1-210ENST00000494054 TRAV38-1A0A0B4J264 116 aa8.09□□□□□ -1.11
UFD1-210ENST00000494054 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.09□□□□□ -1.11
UFD1-210ENST00000494054 A0A1B0GW55 424 aa8.09□□□□□ -1.11
UFD1-210ENST00000494054 hCG_1807616A0A1W2PRN6 198 aa8.09□□□□□ -1.11
UFD1-210ENST00000494054 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.09□□□□□ -1.11
UFD1-210ENST00000494054 APOC1P02654 83 aa8.09□□□□□ -1.11
UFD1-210ENST00000494054 LYNP07948 512 aa8.09□□□□□ -1.11
UFD1-210ENST00000494054 SFTPBP07988 381 aa8.09□□□□□ -1.11
UFD1-210ENST00000494054 DUX4L2P0CJ85 424 aa8.09□□□□□ -1.11
UFD1-210ENST00000494054 DUX4L3P0CJ86 424 aa8.09□□□□□ -1.11
UFD1-210ENST00000494054 DUX4L4P0CJ87 422 aa8.09□□□□□ -1.11
UFD1-210ENST00000494054 DUX4L5P0CJ88 424 aa8.09□□□□□ -1.11
UFD1-210ENST00000494054 DUX4L6P0CJ89 424 aa8.09□□□□□ -1.11
UFD1-210ENST00000494054 DUX4L7P0CJ90 424 aa8.09□□□□□ -1.11
UFD1-210ENST00000494054 HKR1P10072 659 aa8.09□□□□□ -1.11
UFD1-210ENST00000494054 PAICSP22234 425 aaKnown RBP8.09□□□□□ -1.11
UFD1-210ENST00000494054 SLC2A5P22732 501 aa8.09□□□□□ -1.11
UFD1-210ENST00000494054 ACKR3P25106 362 aa8.09□□□□□ -1.11
UFD1-210ENST00000494054 CSNK2BP67870 215 aa8.09□□□□□ -1.11
UFD1-210ENST00000494054 SLC9A3R2Q15599 337 aa8.09□□□□□ -1.11
UFD1-210ENST00000494054 DNAL1Q4LDG9 190 aa8.09□□□□□ -1.11
UFD1-210ENST00000494054 TEX36Q5VZQ5 186 aa8.09□□□□□ -1.11
UFD1-210ENST00000494054 DUX4L9Q6RFH8 374 aaPredicted RBP8.09□□□□□ -1.11
UFD1-210ENST00000494054 WDR82Q6UXN9 313 aa8.09□□□□□ -1.11
UFD1-210ENST00000494054 RHOUQ7L0Q8 258 aa8.09□□□□□ -1.11
UFD1-210ENST00000494054 FGFRL1Q8N441 504 aa8.09□□□□□ -1.11
UFD1-210ENST00000494054 ZNF454Q8N9F8 522 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms